Salpingoeca rosetta: PTSG_00791
Help
Entry
PTSG_00791 CDS
T04136
Name
(RefSeq) DEAD/DEAH box helicase
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_00791
Enzymes [BR:
sre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PTSG_00791
Spliceosome [BR:
sre03041
]
Complex C
Other components
Complex C specific factors
PTSG_00791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
16078854
NCBI-ProteinID:
XP_004998259
UniProt:
F2TXH5
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MIAVLQPRRVAAVSVAQRVAEERGEQLGGVVGYSIRFDDVVNAERTRIKFMTEGVLIREM
MRDPLLQRYSVIVLDEAHERTMFMDICIGLLQKVQKRRPNLKIIVSSATLDAETFKDYFN
RNQTNDPSKDTAAILSIEGRTYPVEVQYAEAPVANYITATIDTICDIHATKGDGDILAFL
TGQDEVDDVVQRLQDRIGRRASVLPLYGALPAQQQMRVFEYPRDGKRKIIVATNIAEASV
TIPGVVYVVDCGFVKLKGYDPETGIESLVITPISKASANQRAGRAGRIRSGAVYRLYTEA
AYEELDSCTIPEMQRQDVSPVVLQLKALGIDNVVRFPFLSAPSAKAMSSALERLFALEAL
DDACKLTDPLGLKMAEFPLPPMQAKMLLSSGEFRCSVEMTIIVAMLQVQHVFVSPRGKKR
EAARQRALFSCEEGDMLTLLNVYEAFMRHGCNPGWCGRYFLNYRSLMRAKEIVGQLRKSL
RRFGVPIVRNGDGVGVESILRCVAKGLFANAARYHMDGTYRSLRGGGRLTIHPSSVLYAE
KPPPYLVYNDVVLTSDNFMRDVSIVEPEWLPELAPHFYEYRAEMLPSARAEKRPKLSSVL
LQRTK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgttcttcagccgcgtcgcgttgctgcagtatcggtggcgcagcgggttgcg
gaggagcggggagaacagcttggcggtgtggtgggctactcgattcgattcgatgacgtg
gtgaatgctgagcgaacacgcatcaagttcatgacggagggcgttctcattcgcgagatg
atgcgcgatccccttctccagcgctacagcgtcatcgttcttgacgaggcccacgagcgc
accatgttcatggatatctgtatcggactgctgcagaaggtgcaaaagcgccgaccaaac
ctcaagatcattgtgtcgtcggccacgcttgatgcagagacgttcaaggactatttcaac
cgcaaccagaccaacgacccgagcaaggacaccgcagccatcttgtccatcgagggtcgc
acgtatcccgttgaggtgcagtatgctgaggcgcccgtggcaaactacatcaccgccacc
atcgacaccatctgcgacatccacgcgacaaagggggacggtgacattcttgccttcctc
acgggccaggatgaggtcgatgatgtcgtgcagcggctgcaggatcggattggacggcgc
gcatccgtccttccgctgtacggcgctctcccagcacagcagcaaatgcgggtgtttgag
tacccgcgggatggcaaacgcaagatcatcgtggcaacaaacattgccgaggcctccgtg
accattccaggcgttgtgtatgttgtggactgcggatttgtcaagctcaagggatacgac
ccagaaactggcatcgagtcactcgtgattacgccaatatcaaaagcgtctgcgaatcag
cgtgccgggcgcgcgggccgcatccgctccggcgccgtctacagactctacacagaggcg
gcctatgaggagctggacagctgcaccatcccggagatgcagcgccaggatgtgtcgcct
gttgtgctgcagctgaaggctttgggcattgataacgtggtccggttcccgtttctctcc
gccccatcagcaaaggccatgagcagcgcgctggagcgcctattcgcccttgaagctctt
gacgacgcgtgcaagctcactgatccgctcggtttgaagatggccgagttcccgctgccg
ccgatgcaggcgaagatgttgctctcctcgggcgagtttcgttgcagcgttgagatgacc
atcatcgttgccatgctccaggtacaacatgtgtttgtcagtccccgtggcaagaaaagg
gaggccgccaggcaacgggccttgttctcgtgcgaggaaggagacatgctgacgttgctg
aatgtgtacgaggcgtttatgcgccatggctgcaaccctgggtggtgtgggcggtatttc
cttaactatcggtccctcatgcgcgcaaaggagattgttggacagctgcgaaagtctctc
agacggtttggtgtgccgatcgtccgcaacggcgatggcgtgggtgttgaatcgattcta
cggtgcgtggccaaaggcctgtttgccaatgccgcccgataccacatggacggcacgtac
cggtcacttcgcggcggcgggcgtttaaccattcacccatcctctgtgctgtatgcggag
aagccgccaccataccttgtctacaacgacgtcgtcctcacctccgacaacttcatgcgg
gacgtctccatcgtcgagccagagtggctgccggagcttgcaccgcacttttacgagtac
cgagcagagatgctgccgtctgcacgtgcagaaaaaagaccaaagctttcttctgtcctc
ctgcagagaacaaaataa
DBGET
integrated database retrieval system
