Salpingoeca rosetta: PTSG_00926
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Entry
PTSG_00926 CDS
T04136
Name
(RefSeq) eukaryotic initiation factor 3B
KO
K03253
translation initiation factor 3 subunit B
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_00926
03012 Translation factors [BR:
sre03012
]
PTSG_00926
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PTSG_00926
Translation factors [BR:
sre03012
]
Eukaryotic type
Initiation factors
eIF-3
PTSG_00926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_Aladin
Beta-prop_IFT122_1st
WD40
WD40_WDHD1_1st
WD40_Prp19
Tricorn_2nd
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
RRM_1
CFAP251_N
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
RRM_MUD2_C
Nbas_N
PIN-TPR-GreABC
Beta-prop_TEP1_2nd
Beta-prop_NWD2_C
ATRX_C
Motif
Other DBs
NCBI-GeneID:
16078992
NCBI-ProteinID:
XP_004998398
UniProt:
F2TXW4
LinkDB
All DBs
Position
Unknown
AA seq
637 aa
AA seq
DB search
MASRELTERDRPVYDDGLDNFILVDGVPVAPKAKLPLLATVLTKVFKEFKPKKVTLAEDP
DTGNGVGAAYVEFSKPQDAKQACEKMNNHKLDKKHTFKTLPLSKFNEVMKTEEEVEFDLP
EPGNTEDSLYSWLLEPNACDQFLLHSGTVVSVCKNRGPRRTTIESRDGWTQYTAMWSPKG
TYLATIHQQGVALWGLPKFEQIGKFAHGGVRGIDFSPDERYLITCSMANKDKTVIVWDVE
TQKECRSFAIDLETTPWPVFKWSYDGNYFARNVENALLVYETKTFTKLGKKNIVIRDLKE
FEWSPADNVIAYWTPGSKSVPYRVSLMKIPSRDELASRNMFKVDDCTMFWQKSGDHLCVR
VAKTKHKKVSHDLEIFFLRKRDVPFEHIELDFEVVDVQWEPVGSKFAVLVKENAFKHRVV
FYDFVEDKMTTIGEFDVPANTEISWSPRGEFCVLVPLRQPESRLKFLRVTDNKCEKLQEG
AHDNVSMGTWDPTGRFFVSAVTRAGANLDFGYKMWWFTGSLVDEREEHAGLWSFQWRPRP
ASLLTEEEEAEVKKTLKSHWKQFEEADKLFSQQSSEEERDRRRALYKQWNDLYEKKKSLI
RKYQHMLDSREGVDDVIQTVSDSKLVLVSQDRTPLEE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccgcgagctcactgagcgcgacaggcccgtctacgacgatgggctggacaac
ttcatcctggtcgacggcgtgcctgtggcaccaaaggccaagctgccgctcctggccacc
gtcctgaccaaggtgttcaaggagttcaagccaaagaaggtcaccctcgccgaggatccc
gacactggcaatggcgttggagccgcatacgtcgagttctccaagccacaggacgcaaag
caagcctgcgagaagatgaataaccacaagctcgacaagaagcacaccttcaagaccttg
cccctgtccaagttcaacgaggtgatgaagacagaggaggaggtcgagtttgatctcccg
gagccaggcaacacagaggacagcctgtactcttggctgctggagcccaacgcgtgcgat
cagttcctgctgcacagtggcactgtcgtttctgtgtgcaagaaccgcgggcctcggcgc
accaccatcgagtctcgtgacggttggacacaatacacagccatgtggtctcccaaggga
acgtacctggccaccatccaccaacagggtgttgccttgtggggtctgcccaagtttgaa
cagattggcaagtttgcgcacggcggtgttcgcggcattgacttctccccagacgagcgc
tacctcattacatgctccatggccaacaaggacaagactgtcattgtctgggacgttgag
acacaaaaagagtgccgctcctttgccattgatctcgagacgacgccctggcccgtgttc
aaatggtcctatgatggcaactactttgcgcgaaacgtcgaaaacgctctcctcgtctac
gaaacaaagaccttcaccaagcttggaaagaagaacattgtgatccgcgacttgaaggag
tttgagtggtcgcccgctgacaacgtgattgcgtactggacccctggctcaaagagtgtt
ccctaccgtgtctccctcatgaagatcccgtcccgtgatgaactggcttccaggaacatg
ttcaaagtggatgactgcacaatgttctggcagaagagcggggatcacttgtgtgttcgt
gttgcaaagaccaagcacaagaaggtgtcacacgatttggagattttcttcttgagaaaa
cgtgacgtgccctttgagcacattgagctggatttcgaggttgtggatgtccaatgggag
cccgtcggttccaagtttgctgtgttggtgaaggagaacgcgttcaagcaccgcgttgtg
ttttacgactttgttgaggacaagatgacgaccattggcgagtttgacgtgcctgcaaat
acggaaatctcctggagccctcgtggcgagttctgcgtcctcgtgcctcttcgtcagcca
gaatcccgcctcaagttcttgagggtaacagacaacaagtgcgagaagctgcaggagggt
gcccacgacaacgtgtccatgggtacctgggatcccactggccgcttcttcgtcagtgcc
gtcacccgcgccggcgcaaacctggattttggatacaagatgtggtggttcacgggctcg
cttgttgacgagagggaggaacacgctggtctgtggtccttccagtggcggccacgacct
gcgtcgctgctgacagaggaggaggaagccgaggttaagaagacgcttaagtcgcactgg
aagcagtttgaggaggccgacaagctgttctcgcagcagtcctctgaggaggagcgcgac
aggcggcgtgccctctacaagcagtggaacgacctctacgagaagaagaagtccctcatc
cgcaagtaccagcacatgctcgactcccgcgaaggtgttgatgacgtcattcaaacagta
tcggactccaaactggtgctcgtcagccaagatcgaacgccgcttgaagagtga
DBGET
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