Salpingoeca rosetta: PTSG_01045
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Entry
PTSG_01045 CDS
T04136
Name
(RefSeq) variable lymphocyte receptor
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
BAMBI_C
Motif
Other DBs
NCBI-GeneID:
16079113
NCBI-ProteinID:
XP_004998520
UniProt:
F2TY86
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MTKRRPLWMAPVRLAAAVAAAGLALLLVAPCDVALAACNNITLCEACQLTNCSPNTTEPL
KVQCASQGLTELPCSLQFDDGTPIAQLDFSNNLISMVSAAAFQNAVSLQHTLTALILDNN
PITSIEAGAFATLTALNHLNMSSLKLAGALSGNMFSTLTALLTLQLDGNQLDTLPANAFD
GLTSLQSLNLANNPISILNADTFQGLSSLLSLSLAGAPISTLSSSSFAGLSALTTLNLNR
VPLQTLSAQTFQGLSSLTELDLSNKKIAAIPTQAFVGLSSIESLNLQGNPLSKLSEGAIS
DMPKLTSLDLSNLAITAIPARSFDNLAALGNITLQGNPIAQLTNASFSSVPSLHTLDLSR
CKLTSVPAAAFTAATRLSALTLARNAITTIAARALRGLSKLTAFDISNNPLRALPASIFQ
GLTSLATLNLAHTNCTLLPPALLTPLHALTSISAAGTPLRAIATGTFDGLPALQHLDLSN
ARITALAPHSLHNLPRLHDLALGGNPLANISSHALGGDLSSLTTLDLSALRIAAIAPHAM
SGATNLTTLLLDHNAITALAADTFAGLSRLATLRITSNPALATLAGGAFDGLSALATLDL
SRLPVAELPSHVFAGMSSLQSVVLTGVDLHTLQPNAFANLSHVAAISLAGMSLSSLPSHA
FGALPALTSLSLDNNPLASLNTDTFAGPLPLLTTLDLSSHGITALPPRTFSGATAVRSLN
LAHNAITTIAPDAFLGLSSATQLVLAGNPIAHVSAGSFAGLGALTSLDLSTSALTGIVSG
SFSGLANLTTLTVDTPHLRHLFPGSFTGLSSLHHLSIANTCVTALPDGVLSPLVHVRTLS
LRNSSLAGAAVSTLTFDGLSQLVALDLSNNDMTAIGDKAFRPLSATRTLNLSSNALGNFT
QAASHVFKGMKALQVLDLSSNPFSTPPANLASLSSLRSVCMGDVPLDCCGLEDLRDSGVL
DLNCSVAAMCAMPLHLRGARLMDTNGTLCTGPHKHPHSKAWYRQTRNIAALAGGGGLVVV
VVVFLAYRHHRSTRRRYAFTTFDDGSADLPHPPPPSSSTPTTSSSRMSRSRSERTPLLLS
AFDDSGRTNTHTHDTSSPRRSRRRRGRDDDDDDLNALSIRITQA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaggaggccgttgtggatggcaccagttcgtttggcggcggcggttgctgca
gcggggttggcgctgctgcttgttgcgccttgtgacgtcgccctcgctgcttgcaacaac
atcacgctgtgcgaggcatgccagctgaccaactgctcccccaacacgaccgagcccctg
aaggtgcagtgtgcatcgcaagggctcaccgagctgccgtgctccttgcagtttgacgac
ggcaccccaattgcccagctcgacttctccaacaaccttatctccatggtctccgctgcc
gcgttccagaacgccgtcagcctgcagcacacgctcaccgccctcatcttggacaataat
ccaatcaccagcatcgaggccggtgccttcgccaccctcaccgccctcaaccacctcaac
atgagcagcctcaagctggccggcgcgctgtcgggaaacatgttctccacactcacggca
cttcttactctgcagcttgacggcaaccagctcgacacactgccggcaaacgcctttgac
ggcctcaccagcctgcaatcgctcaatctcgccaacaaccccatctccattctcaacgcc
gacaccttccagggcctcagttccctgctctccctctcccttgcaggcgcaccaatcagc
acgctgtcgtcatcctcctttgcaggcctcagcgccctcaccaccctcaacctcaaccgc
gtgcccttgcaaacgctcagcgcgcagacattccagggcctttccagcctgaccgagctc
gacctcagcaacaagaagattgccgccattccaacgcaggcgtttgtcggcctcagcagc
atcgagtccctcaacttgcagggcaacccgctctccaagctgagcgaaggcgccatatcc
gacatgcccaagctgacgtccctggatctgagcaaccttgccatcaccgccatccctgca
cgctcctttgacaacttggcagccctgggcaacatcaccttgcaaggcaaccccatcgcc
cagctgaccaacgcgtccttcagcagcgtgccttccctgcacaccctcgatctttcccgc
tgcaaactcacatctgtccccgctgccgccttcacggccgccacacgcctgtcggcgctc
accctcgcccgcaacgccatcaccaccatcgctgccagggccctgcgcgggctgtccaag
ctcacggcatttgacatctccaacaatcccttgcgtgccctgccagcctccatcttccaa
ggcctcacctccctcgccaccctcaacctcgcccacaccaactgcaccctcctgccccca
gccctcctcacaccactccatgccctcaccagcatcagcgcggccggcacaccgctgcgc
gccattgccacgggcacctttgacggcctccctgccctgcagcacctcgacctcagcaac
gcccgcatcaccgccctggcaccacactccctccacaacctcccgcgcctgcacgacctt
gccctcggcggcaacccgctcgccaacatctcctcgcacgcgctcggtggcgatctgtcg
tcactgaccacccttgatctctctgccctgcgcatcgccgccattgcgccccacgccatg
agcggcgcgaccaacctcaccaccctgctcctcgaccacaacgccatcaccgccctcgcc
gccgacaccttcgccggcctttcccgcctcgccaccctgcgcatcacaagcaacccggcc
ctggccacgctcgctggcggcgcttttgacggcctgagcgcactcgccaccctcgacctg
tcccgcctgcccgtcgccgagcttccctcgcatgtgtttgctggcatgagcagcctgcag
agcgtggtgctgaccggtgtggacctgcacacgctgcagccaaacgcatttgcaaacctg
tcgcacgtcgctgccatctccctcgccggcatgagtctctccagtctgccgtcccacgcg
tttggcgccctgcctgcgctcacatccctttccctcgacaacaacccgctcgcctcgctt
aacacggacacgtttgcgggaccgctgccgctgctgacgacgctggacctgagcagtcac
ggcatcaccgccctgccaccacgcaccttctctggcgccacggccgtgcgctccctcaac
ctcgcgcacaacgccatcaccaccatcgccccggacgcctttctgggcctctccagcgcc
acgcagcttgtgcttgcaggcaaccccattgcgcacgtgagtgccggctcgtttgctggc
cttggcgcgctcacgtcgctggacctgagcacgtccgcgcttacgggcatcgtgtctggc
tcgttctccgggctcgccaacctgaccacgctcaccgtcgacacgccccacctgcgccac
ctcttccctggctcgtttacgggcctctcctccctgcatcacctcagcatcgccaacacg
tgcgtcaccgccctgcccgacggcgtgctgtcgccgcttgtgcacgtgcgcacgctgtcg
ctgcggaacagcagccttgctggcgcggctgttagcacgctcacctttgatgggctgagc
cagctggttgccttggacctcagcaacaacgacatgaccgcaattggggacaaagcgttc
cgccccctcagcgccacacgcaccctcaacctctccagcaatgccctgggcaactttacg
caagccgcatcgcacgtgttcaagggcatgaaggcgcttcaagtcctcgatttgtccagc
aaccccttctccacgccgcccgccaacctggcgtccctctcctcgctccgcagcgtgtgc
atgggcgacgtgcccctcgactgctgcgggttggaggacctgcgtgacagcggcgtgctt
gatctcaactgcagcgtcgctgccatgtgtgcaatgcccctgcacctgcgcggcgccagg
ctcatggacacaaacggcacgctgtgcacgggtccacacaagcacccgcacagcaaggcg
tggtacaggcagacgcgcaacattgctgcgcttgctggtggtggtggcctggttgttgtc
gtcgtggtgttccttgcgtaccgccaccaccgcagcacgcgccgtcgctatgcgttcacc
accttcgacgacggcagcgccgatctgcctcatccaccaccaccatcgtcatcaacacca
acaacatcatcatcacgcatgtcacggtcgcgttcggagcgcactccgctgctcctgtct
gcattcgacgacagcgggcgaaccaacacgcacacgcacgacacgtcctccccgcgcagg
agccggcggcggcgcggccgtgatgatgacgacgacgatctcaacgcactctccatccgc
atcacgcaggcgtag
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integrated database retrieval system
