KEGG   Salpingoeca rosetta: PTSG_01055
Entry
PTSG_01055        CDS       T04136                                 
Name
(RefSeq) LARP1 protein
  KO
K18757  la-related protein 1
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_01055
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     PTSG_01055
SSDB
Motif
Pfam: LARP1_HEAT Rtf2 Y_phosphatase3 NPR3
Other DBs
NCBI-GeneID: 16079123
NCBI-ProteinID: XP_004998531
UniProt: F2TY97
LinkDB
Position
Unknown
AA seq 509 aa
MALIVHGATGHPMPLCPSTSLLPDLRFTFLERPVDVKTKKKKRKSKAKKAEPSSASPADD
QQQQQQQQQQQQQEQEKPQDNAPATPDNEDTAVPREPSDNALAPDSVTEQLLLQKPGSQR
PKQIAFSKEDLSDDFKDEDLQSLTIIISTPSKPRRLKHEGKDRTGVSVKRATKRAGLRRE
IMADFEEYEADREYFDRYEATRRAHLGSKTVIRPEALEEISKPRSGSVREAPEHMAVSDV
VSSDRIRASSVGSPRADTALAPLPLTPNEMRQGGRFFPAKTTPEPSPLKKGKSYKSKYST
RPEHEDSIGWVMNPDAEPYQPQGSVEDVRSAQNTKPQRRDVSRYINGEDATQRHVYSKYH
AQALRARKRLGPARSQEMRNLFRFWSFFLREHFNKNMYTEFKKLAMEDHKAGSRYGMECL
FRFYSYGLEKRYRFDLYQEFQDMVLWEHNEGHLYGLEKLWALLHYSKDHRYPGQLRPELK
EIIAPFKKIEDFRISISASPLNKRTQART
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggctctcattgttcatggggcaacgggtcatccaatgccgctgtgcccaagcacatcc
cttcttcccgacctccgtttcacattcctagagcgtcctgttgatgtgaagacgaagaag
aagaagcggaagagcaaggcgaagaaggcggagccaagctcagcatcaccagcagacgac
cagcagcagcagcagcagcagcagcagcagcagcagcaagagcaagagaagccgcaagac
aatgcaccggccacccctgacaatgaggacaccgctgtacctagggagccttcggacaat
gctttggcgccagactcggtgacagagcaactgctgctgcaaaaacctggatcgcagcgg
cccaaacagattgccttcagcaaggaagacctttccgatgacttcaaggacgaagacctg
cagagcttgaccatcatcatctccacgccgtcgaaaccgaggcgcctgaagcatgagggc
aaggatcgcaccggcgtgagcgtgaagcgcgcaacaaagcgggctggcctccgtcgcgaa
atcatggctgactttgaggagtatgaggctgaccgtgagtactttgataggtacgaagca
acacgccgtgcccacctgggttccaagactgtgattcggcccgaggcattggaggagatt
tccaagccgcgcagtgggtctgtgcgcgaggcgccggagcacatggccgtgtccgacgtt
gtgtcgtccgatcgcattcgtgccagcagtgttggctcgccgcgcgccgacactgcgctt
gcaccgcttccactcacaccaaatgagatgcgccagggcggccgcttcttcccagccaag
accacaccagagccatcgccgctcaagaagggcaagtcctacaagtcaaagtacagcacc
cgcccagagcatgaggactcgattggctgggtcatgaaccccgatgcggagccataccag
ccacagggctcggtggaagatgtccgcagcgcgcagaatactaagccccagcgccgtgac
gttagccgctacatcaacggtgaggacgcgacgcagcgacacgtgtacagcaagtaccat
gcacaggcgctgcgagctcgcaagcgccttggcccggcaaggtcacaggagatgcgcaac
ctcttccggttctggtccttcttcctgcgcgagcacttcaacaagaacatgtacaccgag
ttcaagaagctcgccatggaggatcacaaggctggctctcggtacggtatggagtgcctg
ttccggttttacagctacggcctggagaagcggtaccggtttgacctgtatcaggagttc
caggacatggtgctgtgggaacacaacgagggccacttgtacgggcttgagaagctgtgg
gcgcttctgcactacagcaaagaccaccgctaccctggccagctgcgcccggagctcaag
gaaattattgcaccctttaagaagattgaggactttcgcatctccatcagcgcatctccg
ctgaacaagaggacacaagcacgcacttga

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