Salpingoeca rosetta: PTSG_01367
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Entry
PTSG_01367 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_01367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_01367
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_01367
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_01367
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PTSG_01367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
16077936
NCBI-ProteinID:
XP_004997339
UniProt:
F2U050
LinkDB
All DBs
Position
Unknown
AA seq
2081 aa
AA seq
DB search
MMQRNFGGGGGGGFGQQKPAFGGGGAFGQQQNKFGATSAFGGTGGGTAFGGGGFGKQQSS
FGGGASSQFGSAMRSSAGMSAGFGSQFGGGQQQQQAGASSTLQGPAYSPHTTTLGKTPTQ
YTNITAMSAYSQMSPEELRLNDYLINNGQPPRAGPQSAGTGFGQQKPAGQFGQPGSAFGG
GAGSQFGQQKAFTSQFGSSFQQQQQKPGGMFGQTTQSQWGASKFGAAGGGSQFGQKTGAF
GGGGGGGMFGGQQQQQQQRFGQTGAFGQQGMGAFGQKPQQAGAFGQKTGFGQQAGAFGQQ
KPAFGQQQQGAFGQKTGFGQTSQFGQTSQFGQSQAGAFGQKPGFGQQAGAFGQQKPAFGQ
QQQGGSPFGQKTGFGQTSQFGQTSQFGQTQAGSPFGQKTGFGQQPTTSAFGGGGAFGQQK
PGMGMGMGMGTSQASAFGAKQPFGQTSQFGAKPSPFGGGTTKAPFGQQQGASPFGGGMQQ
QQQQQRPGMGMGMGMGMGMGASPFGGGMQQQQQQQGFGGQGAFQKPATMGSAFTPMSMGQ
QQQQQAQMMQQPQAAFPMMMPAPMVAVPQPAVMAGVPEAVYPGTPYGDRALFRGINVKDS
AARAKDKKELKQTPQAARVRGLQSAQRRQFSPRLSQYHALLDADTVSKEVPDLIAPPTRR
LAMNMHDYSRVHENPLLKSTASAADSSKVRLNETAVDASTTAQFLSDLDATATAAADSAT
QKQNQQPKQGATAADRAKGTSSSADAGASRGSDKAAAADVSMMSVRKGPLSRPTPPTPPN
FDVTTPGHPLIGAHAAASTPVSRAQGGSTRRTALGDTDHAAGAEASDDSNTSTSSADLNK
PADPLDFSVGEHTIVSFNVPGHGRCECTCAEDFARFTLGELSQASEIEVKHDTHGSVRWF
NTVDLSGGYDFAVFVRFSDKAVEVYPASEQYHPEQGEELNSRAIITLNNVFKRDSQGNIV
TDPDKIAEYKRKVKLRTERAGARLIKYDAERGIWQFEVQHFSKYGMDDDSDTEDEAEALK
AAKLKQQQLMMQRQQQQQQQQKQKQRDGLKGTAQKKPPASSTSRYSMDLEDENDTGNVPP
ATTAAAAATSVRSPFETLSPSMRAKARTQESLRMAFFRTSQDPADNPLLLPREPVLADYG
FTTASPLDAPPTRARGSVVSSPFDPAVDSPRRQQQQQQQQQQQQQQQQRAAFSVGSPFAK
APSRPSTTAAETAAGAAASSLSPFTPAAGGSGGEERSRTLAETQLQRSMVQVSPKLSFFR
GAGKLAVDVDPTTTLLYHLHKNRAADRTHAAGTIADAAMAMGSAFRVSFGVADVVSIPGV
SNAGVASQASPDRQLRGLLPTSRSQKRNAARLVSLGQLFTMRDANNPERSVGAGADLRAA
LELPIAAIVDKSEVSPAQVTREQPVPLVRIESTEAASQRAHAIFLCKKLQREFREAGTNP
AIPEQVRASLHYQSQVMSLLDALWGPPQLWGKAAAAPEEIQPHLASHDDESQAHSEAAML
RRDVIIRWFESVCESDISVGDVPGFPAEETQYLKQLLAHIHRHDLAAAVDLACQFKDHRL
AMHLSQLDEGQRCAPLLRDQLVDWDERAASNRIHPLRRRVYALLAGCSTWPDTPHRHEGN
RIYTLEGLTWKQTLTTFLTYLGPSSLGAVLDTYEEATRVWLTDQKGGRVIARPPVVAHQS
HCVTLSSPNMRMWTRDAPESREATRPERQDLLYCLLRLKAYGGKDLAVKDLLNPLHHTAD
EHDYRLSWLLFVLLRALGVVASFPTERLLHVNFASQLEQMGCLSAALAVMQHIDDDATRS
LLVRRFIMRHHELHAATDAGLLAQLRVCPAWFAESALVARTQQYHRARQTAATPRASTAA
DGTARLPGAVLATTTTKLPSADAGAVAAAQELFALSLDAALPDVAMRLIRAELLSPMVVL
GRFADLLALIRTLRERFPGRLTGALDVQLHTTSDANILMFVEACLTHIVAVRGLAGGGWG
SVGPSPATLCSTVSNLPCRPQVRTPCFADRPKSVAPEPDSRLHRLDKLRNQVLAEQLASC
VNKMGATCVEACTVLAQCDALSSQSRLNTLSTSLNAFALAL
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcgcaactttggcggtggtggcggcggcggcttcggccaacaaaaacccgcg
tttggaggcggcggcgcctttggacaacaacaaaacaagtttggtgccacttcagctttt
ggcggtaccggtggcggaaccgcgtttggaggcggcggctttggcaagcagcagagctct
tttggcggcggcgcatcaagccagtttggcagcgccatgcgttcatcagcgggcatgtca
gccggctttggctcgcaatttggtggcggtcagcagcagcaacaggcaggcgccagcagt
acattgcaaggacccgcctattctccacacacgaccaccctgggcaaaaccccaacccaa
tacacaaacatcactgccatgtctgcctactctcaaatgagccctgaggagctccgactt
aacgattacctgatcaacaatggacaaccgcctcgtgcggggccccagtctgccggcaca
ggtttcgggcagcagaagcctgccgggcagtttgggcagccagggtcggcgtttggcggc
ggcgcaggatcgcagtttggccagcagaaggcgttcacctcccagtttggctccagcttc
cagcaacagcagcagaagcctggcggcatgtttggacaaaccacccagagccaatggggc
gcaagcaagtttggcgctgctggtggcggcagccaatttggccagaagacgggcgcgttt
ggtggtggtggcggcggcggcatgtttggcgggcagcagcagcaacagcagcagcggttt
ggacagacgggtgcatttggccagcaaggcatgggcgcctttggccagaagccacagcaa
gcaggcgcctttggccagaagacaggctttggacagcaagcaggtgctttcggacagcag
aaacccgcctttggccagcagcagcaaggtgcatttggacagaagaccgggtttggccag
acgtctcaatttggccagacatcccagtttggccagtcccaagcaggcgcatttggccag
aagccgggctttggtcagcaagcaggcgctttcggacagcagaagcccgcctttggtcag
cagcaacaaggcggcagcccctttggccagaagaccgggttcggtcagacgtcgcagttt
gggcagacgtcgcagtttggtcagacgcaggccggcagcccctttggccagaagacaggc
tttgggcagcagcccaccacgagcgcgtttggcggtggcggtgcatttgggcaacagaag
cccggcatgggcatgggcatgggcatgggcacgtcgcaggcgtcggcgtttggcgcaaag
cagccgtttgggcagacctcgcagtttggggccaagcccagcccctttggcggcggcacc
accaaggcgccctttggccagcagcagggcgcctctccctttgggggcggtatgcagcag
cagcagcaacaacaacggcctggcatgggcatgggcatgggcatgggcatgggcatgggg
gcatccccctttggcggcggcatgcagcagcagcagcagcagcagggctttggcgggcag
ggcgccttccagaaaccagctaccatgggctctgcgttcacgcccatgagcatgggacag
cagcagcaacagcaggcacagatgatgcagcagccgcaggccgcgtttcccatgatgatg
ccggcgcccatggtggctgtgccgcagcccgccgtgatggctggcgtccccgaggccgtc
tacccgggcaccccatatggcgaccgcgccctcttccgcggcatcaacgtcaaggactct
gctgcccgagcaaaggacaagaaggagctcaagcagacgccccaggccgcccgcgttcgc
ggcctgcagagcgcacagcgccgtcagttctcccctcgcctctcccagtaccacgcactc
ctggatgctgatacggtgagcaaggaagtgcctgatttgattgcgccacccacgcgccgc
ctggccatgaacatgcacgactactcgcgtgtccacgaaaacccgctcctcaagtcaacc
gcatctgccgcagactcttcaaaggttcggttgaacgagacggctgtggacgcctccacg
actgcgcagttcctgagcgacctcgacgcaacggccacagctgccgctgactcagcaacg
cagaagcagaaccagcagcccaagcagggtgccacagcggcagacagggcaaaagggacc
agctcatctgcggacgctggtgcttcgcggggctctgacaaggccgctgctgcggatgtt
agcatgatgtctgtgcgcaagggcccgctctcgcgccccacgccgccgacgccgcccaac
tttgacgtgacgacgcccggccacccgcttattggtgcgcatgccgccgcgtccacgccc
gtgtcgcgtgcgcagggcggcagcacccggcggacggcgctcggcgataccgaccacgcc
gccggcgctgaggcgtccgatgactccaacacgtccacgtcctctgctgatctgaacaag
ccggcagacccgctcgacttctctgttggcgagcacacgattgtgtcgttcaacgtgccc
ggtcacggtcgctgcgagtgcacgtgtgccgaggactttgcccgcttcacgctgggcgag
ctgagccaggccagcgagattgaggtgaagcacgacacgcacggcagcgtgcgctggttc
aacaccgtcgacctctctggcggctacgactttgccgtctttgtcaggttttctgacaag
gctgtggaggtgtaccctgcctctgagcagtatcacccggagcagggggaggagcttaac
tcccgtgccatcatcaccctcaacaacgtcttcaagcgcgactctcagggaaacatcgtc
accgacccagacaaaattgcagagtacaagcgcaaggtgaaacttcgcacagagcgtgca
ggcgcacgcctcatcaagtacgacgccgagcgcggcatctggcagtttgaagtgcagcat
ttcagcaagtatggcatggatgatgactcggacacagaagatgaagccgaggcgttgaag
gccgccaagctcaagcagcaacagctaatgatgcagcggcagcaacagcaacagcaacag
cagaagcagaagcagcgcgatggactcaagggcacagcgcagaagaagccgccggcatca
tcgacgagccggtacagcatggacctcgaggacgaaaatgacacgggcaatgtcccaccc
gccaccaccgcggccgccgctgcaaccagtgttcggtcgccgtttgagacgctgtcacca
tcgatgcgggcgaaagcaaggacgcaagagtcgttgaggatggcgtttttccgcacgagc
caggatccagcggacaacccgctgctgctaccgcgcgaacccgtgctggcagattacggc
ttcaccacagcctccccactggatgcgccacccacgcgtgcacggggctcagtcgtgtcc
tccccctttgaccctgccgttgactcgccgcgccgccagcaacagcaacagcagcagcag
cagcagcaacagcaacagcaacagcgcgctgcgttttccgtgggcagcccgtttgccaag
gcgcccagccgcccaagcacaactgcagctgagacagcagcaggggcggcggcatcgtcg
ttgtcgccgttcacaccagcagccggcggcagcggtggcgaagagcggtcgcgcacgctg
gcagagacacagctgcagcgcagcatggtgcaggtgtcgccaaagctctcgttcttccgt
ggggcaggcaagcttgccgtggacgtcgacccaacgacgacgctgctgtatcacctgcac
aagaaccgcgcagcagaccgcacccacgccgcgggcacgattgcagacgcagccatggcc
atgggcagcgcgttccgcgtctcctttggcgttgcagatgtggtgtccatccctggcgtt
tctaatgccggggttgccagccaggcgtcaccggaccgccagctgcgtggcctgctgccc
acgtcgcgctcacagaaacgcaacgcagcgcggttggtgtcgctcggccagctcttcacc
atgcgggatgccaacaatcccgagcgcagcgtgggtgccggcgccgacctgcgtgctgct
ctggaacttcccattgccgccatcgttgacaagagcgaggtgtcccccgcgcaggtcacc
cgtgagcagccggtcccgctcgtgcgcattgagtcgacagaggccgcgtcccagcgtgca
cacgccatcttcctgtgcaagaagctgcagcgcgagttccgtgaagccggcaccaacccg
gccatcccagagcaagtccgcgcctccctgcactaccagagccaggtgatgtcgctgctt
gatgcgctgtggggcccgccgcagctgtggggcaaggctgctgccgcgccggaggagatc
cagccacacctcgcctcccacgacgacgagtcgcaggcgcacagcgaggccgccatgtta
cgacgagacgtcatcatccgctggttcgagagcgtgtgcgagagcgacatcagcgtgggc
gacgtacccgggtttccagcagaggagacgcagtacttgaagcagctgttggcacacatc
caccgccacgacctcgccgcagccgtcgaccttgcctgccagtttaaggaccaccgactg
gcgatgcacctgtcgcagcttgacgagggccagcggtgcgccccgctcctgcgcgaccag
ctcgtggactgggacgagcgcgccgcatcaaacaggatccacccactcaggcggcgcgtg
tatgcgttgctggccgggtgctcgacgtggccggacacaccgcatcgccacgaaggcaac
cgcatctacaccctcgaaggcctcacttggaagcagacgctgaccacgtttctgacatat
ctcgggccctcaagcctcggcgccgtcctggatacgtacgaggaagcgacgcgcgtgtgg
ctgacggaccagaagggtgggcgcgtgattgcccgcccgccggtggttgcgcaccagtcc
cactgcgtgacgctgtcatccccgaacatgcgcatgtggacacgcgacgcgcccgagagc
agggaggcgacgcggcccgagcggcaagacctcctgtactgcctgctgcgactcaaggcg
tacggcggcaaggacctcgccgtgaaggacctgctcaacccgctgcaccacaccgcggac
gagcacgactaccgcctcagctggctgctgtttgtgctgctgcgcgccctgggcgtggtg
gcgtcgttcccaacagagcgcctgctgcacgtcaactttgcgtcgcagctggagcagatg
ggctgcctttccgccgcactcgccgtgatgcagcacattgatgacgacgccacgcggtcg
ctgcttgtgcgccggttcatcatgcgccaccacgagctgcatgccgccacagatgccggc
ctgcttgctcagctgcgcgtgtgcccggcctggtttgccgagtcggcccttgttgcgcgc
actcagcagtaccaccgcgcacgccagacagcggcgacaccacgtgcgtcgacagccgct
gatggcactgcccgcctgcctggcgccgtgcttgccacgacgacgacgaaactgccgagc
gcggacgcgggcgccgttgctgctgcgcaggagctgtttgcgctgtcacttgacgcggcg
ctgccggacgtggccatgcgcctgatccgggccgagctactgtcgccgatggtggtgctc
ggccgctttgcggacctgctcgccctcatccgcacgctgcgggagaggtttccaggccgc
ctgacaggcgcccttgatgtgcagctgcacaccacctcggatgccaacatcctcatgttt
gtggaggcgtgcctgacgcacattgttgctgtgcgcggtctcgctggcggtggctggggc
agtgtcggcccttcgccagccacgctgtgcagcaccgtgtccaacctgccgtgccgcccc
caagtccgtacaccgtgctttgccgacaggcccaagagcgttgccccagagcctgattcg
cgccttcatcgccttgacaagctgcgcaaccaggttcttgctgaacaactggcatcgtgc
gtgaacaagatgggtgccacttgtgtggaagcgtgcaccgtgctggcgcagtgcgatgcg
ctgtcctcgcagtcccgcctcaacacgctctccacatccctcaacgcctttgccctcgcc
ctgtga
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