Salpingoeca rosetta: PTSG_01539
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Entry
PTSG_01539 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sre
Salpingoeca rosetta
Pathway
sre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PTSG_01539
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sre01007
]
PTSG_01539
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_01539
Enzymes [BR:
sre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
PTSG_01539
Amino acid related enzymes [BR:
sre01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PTSG_01539
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PTSG_01539
Prokaryotic type
PTSG_01539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
She2p
APG6_N
TetR_N
Motif
Other DBs
NCBI-GeneID:
16078114
NCBI-ProteinID:
XP_004997517
UniProt:
F2U0M8
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MLALGFARKACCSAAASAAAAAASGRVRLRLLSAAAAGVGGGTANIGPTSAATAPIRPSL
NFKGWRDNLEYHRANIRNRNVEANVDAAVEAYEQYVAQLQRVEQLRHERNRLTDSIKKMK
DKKGSEFQELLRQSKQNKTILQEVESQMPWVEEAMLIEGLAIPNETHPDVPVGSEEQATV
LQTVNEAPSFCFEPRDHLAIAQPNNLINFRSGAAVTGSRFYFLHGKVALLEFALVHYAIN
FMTQRGYEPVTVPDIVKTRVAESCGFQPRDDASQIYHLDQQHSVGQAELCLAGTAEIPLA
GMWMGHTFDDSELTKKYIAVGHAFRCEAGGAGATNRGLYRVHQFTKAELFVISPGDLETS
CGLHDEMLQDQIDLFASLGLHFKVLDMPTEDLGAPAYRKYDIEAWMPGRQEFGEISSTSN
CTDYQSRRLNIRSRPTQAAPSSFVHTLNGTACAVPRMIVAIMETFQREDGDFDIPAVLEP
YMPHGEGRKPT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctgggctttgcgaggaaggcgtgctgttctgctgcggcttctgctgcagct
gcggctgcttcgggacgggtgcgactgcgactgctgtcggctgcagcggctggggtaggc
ggtggaacagccaacatcgggcccacaagtgcggcaacggcaccgatccggccctcgctc
aacttcaagggttggcgcgacaacctagagtaccaccgggccaacatccgcaacagaaac
gtcgaggcgaacgtcgacgccgcggtggaagcatatgaacagtacgtggcacagctgcag
cgtgtggagcagctgaggcacgagcggaatcgtctcaccgacagtatcaagaagatgaag
gacaagaaagggtcagagttccaggagctgctgcggcagtccaaacagaacaagacaatc
ttgcaagaagttgagagccaaatgccctgggtggaagaagccatgctgattgagggcctc
gccattccaaacgagacacacccagacgtgcccgttgggtcagaggagcaagcgacggtg
ctgcaaacagtgaacgaagcaccgtccttctgttttgagcccagagaccaccttgccatt
gcgcagcccaacaacctcatcaacttcaggtctggtgctgcggtcaccggcagtcgcttc
tattttcttcatggcaaagtcgccctgctcgagtttgctctcgtccactacgcaatcaac
ttcatgacgcagcggggatatgagcctgtcactgtacccgatattgtcaagacgcgcgtt
gctgagagctgcggtttccaaccaagagacgacgcatcacagatctatcaccttgaccaa
cagcactctgttggccaggctgagctctgtcttgctggaacggccgaaatcccccttgca
ggcatgtggatgggacacacatttgatgacagcgagttgacaaagaaatacatcgctgtc
ggccacgccttccgctgtgaagcaggcggtgccggcgccacgaatcgcggtctttatcgc
gtccaccagttcacaaaggctgagctgtttgtgatttcgcctggcgacctggaaacgtcg
tgtggccttcacgatgagatgctgcaagaccaaatcgacctctttgcttccctcggcctc
cactttaaggtgttggacatgccgacagaggaccttggcgcaccagcgtatcgaaaatac
gacattgaggcgtggatgccggggcgacaggagtttggcgagatttcgagcacgagcaac
tgcacggactaccagagccgccgcctaaacatccgctcccgtccaacgcaggccgcaccg
tcatcgttcgtccacaccctgaatggcacggcgtgcgctgtgccgcggatgatcgttgcc
attatggaaacgtttcaacgcgaagacggagactttgacattcccgctgttctcgaaccg
tacatgccccatggcgaaggaagaaagccgacgtaa
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