Salpingoeca rosetta: PTSG_01612
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Entry
PTSG_01612 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sre04121
]
PTSG_01612
Ubiquitin system [BR:
sre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
PTSG_01612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
16078188
NCBI-ProteinID:
XP_004997592
UniProt:
F2TYG0
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MRGRGRGRVVWRGGGDGGGKGKGVVVVGPWKSTTSSTPATAATATGSSVGGAEEVAAWPH
DDVEDADDVDEDNDDAEDDDGGEDSDAGGDDEDDGDDAVYRIDRGSQSAADDEEEDASCC
IICLDDMQRTDPQWALNGVRQPSTLSDELFPDKPLIWLCPKCRQAYDKKETPTKYFCYCG
KQQDPPADPWIAPHSCGEACGRALTPPCGHTCPLLCHPGACPPCPQVVPRATCFCGQTTM
TKRCTDRHFSCGKPCNKLLNCGRHHCPNPCHKGECEPCTETRPLRCKCGGSVATVACWLN
EWQCDRVCGKPLACGHHTCEVVCHDGECPTCPRGLQRTCPCGKEQHTLPCTQDVPTCGRT
CGKPLACGKHTCPRACHQGDCGPCQIAVTKRCRCGGSSKVLPCSQTFTCQSRCGHTRSCG
RHKCRKRCCGGRCDDCPETCGRKLNCGNHTCKSPCHPGACYPCTARKSVTCACGRTVIRV
PCGRERKTAKPACSLQCTRRPYCRHEHQQPHTCHSGQCPPCTQTCSQPLKCGHTCHAPCH
DKQPTLAEEKAARDARRKQQKRNKKLKKKQAKQGSKPAGGNTNTLDAHAPLLPPQPTPCP
PCKEPVARACVGMHEIREMPCCENKAFACKQRCGRMMACGQHHCDRGCHLPLSAGATWCE
VDASLRQAFGSDASAPAAADAAVYSTPELGLGRATTASGKGKGSNSSNSSNSNNTNSNNS
SSSSNSNTTNNNNSNSNSNSSSDPALRGDAPMIGRGCGTCRKACPRTRPTDCTHTCPKGR
CHAGACPPCMESIELTCHCNATRFRVVCSEWCAATPAERDQQRSCGGRCPKRMGCGHRCV
STCHSGPCSPTEECTKNVRLRCKCRGRKKELPCPEYQRLRALGRTDAEIAPCTPTTCEMD
TEKSSAAAGVGGGGDPAEKRDKPKKEAAHQHKHVTRQQKKEDRAPHTAANTSKGSSSTAV
ASPPASSHVAGVIGGVAVALLALVIAYFWLA
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaagaggacgaggacgggtggtgtggcgtggaggtggagatggaggtgggaag
gggaagggtgttgttgttgttgggccatggaagtctacaacatcatcgacaccagctaca
gctgcaactgctacaggttccagtgttggtggcgcagaggaggtagcagcttggcctcat
gacgacgtggaagatgcagatgacgtggatgaagacaacgacgacgctgaagatgatgat
ggcggtgaagacagcgatgcggggggcgacgacgaagatgacggtgatgatgccgtgtat
cgcatcgacagaggatcccagagcgcggccgatgatgaagaagaggacgcatcctgctgc
atcatttgcttggacgacatgcagcggacagacccgcagtgggccctgaacggcgtgcgc
cagccgtctacgctcagtgacgagctcttcccagacaagcccctcatctggctatgtcca
aagtgcagacaggcgtacgacaagaaagagacgccgacaaagtacttttgttactgcggc
aagcaacaagacccgccagcagacccgtggattgcccctcactcgtgcggcgaggcctgt
ggtcgggccttgacaccgccatgcggacacacctgtcccctcctctgccacccaggtgcg
tgcccaccatgcccgcaggtcgtaccacgtgccacgtgcttctgcggccagacgacaatg
accaagcgctgtaccgaccgccatttttcctgcgggaagccgtgcaacaaactgctcaac
tgcggccgccaccactgcccaaacccctgccataaaggtgaatgcgagccatgcacggag
acacggccgctgcggtgcaagtgcggcgggtccgtggccaccgtcgcctgctggctgaac
gagtggcagtgtgaccgcgtgtgcgggaagccacttgcatgcggccaccacacatgcgag
gtggtgtgccacgacggcgagtgccccacgtgcccacgaggcctacagcgcacctgcccc
tgtggcaaggaacagcacacgctgccctgtacgcaggacgtgccaacctgtggccgcaca
tgtggaaagccgctcgcctgcggaaagcacacgtgcccacgcgcgtgccaccagggcgac
tgcgggccgtgtcagattgccgtgacaaagcgctgtcgctgtggcggcagctccaaagtg
cttccgtgttcgcagacgttcacgtgccagtcgcggtgcgggcacacgcggtcttgcggg
cgccacaagtgccgtaagcgctgctgtggcggccgctgtgacgactgcccggagacatgt
gggcgcaaactcaactgcgggaaccacacgtgcaagagcccctgccatccgggtgcgtgc
tatccttgcacggcgcgcaaatccgtcacgtgcgcgtgtgggcgaacggtgattcgcgtg
ccgtgtggccgcgaacggaagacagccaagccggcgtgctcgctgcaatgcacacgccgt
ccgtattgtcgacacgagcaccagcagccgcacacgtgtcactcgggccagtgtccgccc
tgcacgcagacgtgcagccagccgctcaagtgtggacacacctgccacgcaccgtgccac
gacaagcagccaaccctggcggaagagaaagcggcgagggacgcgcgacggaaacagcag
aagaggaacaagaaactcaagaagaagcaggccaagcaaggcagcaagcccgcaggcggg
aacacgaacacgctagacgcacacgcgccgctgctgccgccacaacccaccccttgtcct
ccatgcaaggagcctgtggcacgcgcatgcgtgggaatgcacgagattcgggagatgcca
tgttgcgagaacaaggcgtttgcttgcaagcaacggtgcgggcggatgatggcgtgcggg
cagcaccactgtgatcgcgggtgccacctgcccctatcagccggggcgacgtggtgtgaa
gtggacgcatcgcttcgccaggcgtttggatccgatgccagcgcacctgcagccgctgac
gctgccgtctacagcacgccggagcttgggcttggtcgcgccaccaccgccagcggcaag
ggcaaaggcagcaacagcagcaatagcagcaacagcaacaacaccaacagcaacaacagc
agcagcagcagcaatagcaacaccaccaacaacaacaacagcaacagcaacagtaatagc
agcagcgacccggcgttgcgtggggacgcgccgatgattggtcgaggttgcggcacgtgt
cgcaaagcatgtccgcgcacacgccccacagactgcacgcacacgtgcccaaaggggcgc
tgccatgcaggcgcctgcccaccctgcatggagagcatcgagctgacgtgccactgcaac
gccacgcgcttccgtgtggtgtgcagcgagtggtgtgcagcaacgcctgctgagcgggac
cagcagcggtcgtgcggggggcggtgcccgaagcgaatggggtgtggccaccggtgcgtg
tccacgtgtcattccggaccctgctctccaacggaggagtgcaccaagaacgtcaggctg
cggtgcaaatgcaggggtcgcaagaaggagctaccctgtcccgagtaccagcggctgcgg
gcactggggcggaccgatgcggagattgcgccatgcacacccaccacgtgcgagatggac
actgagaagagcagtgctgctgcaggtgttggtggtggtggtgacccggcagagaagcgt
gacaagccgaagaaggaggcagcgcatcagcacaagcatgtaacgcgccagcagaagaag
gaagaccgcgcaccacacacggccgccaatacaagcaagggttcaagttctacagccgtg
gcatcgccacctgcttcctctcacgtggctggcgtgattggtggcgtggctgttgccctc
ttggcgctggtgattgcttacttctggctggcgtga
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