Salpingoeca rosetta: PTSG_01759
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Entry
PTSG_01759 CDS
T04136
Name
(RefSeq) RNA helicase
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_01759
Enzymes [BR:
sre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PTSG_01759
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PTSG_01759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
nSTAND3
Motif
Other DBs
NCBI-GeneID:
16078334
NCBI-ProteinID:
XP_004997739
UniProt:
F2TYV9
LinkDB
All DBs
Position
Unknown
AA seq
2166 aa
AA seq
DB search
MMTSPQQATALMETPRLTTALRTFTSYSEDEEFAQGVLSDQELEALIQRKKAKQHADLDE
SEVSDAEDTESAAASKQQDSSGGQDVVMAEFGVKVAFDKVQSQTLDELLLEAQRYRARER
ARQLQTARRVQAEEQAKATKVLLTSARKPGQRKAKQPQQAAAPKAPSSSSSPPSSSASAQ
QAAASGGPGAHLPRKWLRQKCRQHFDTAAADNIRAAVFDLLAGPKSTDELQNDLFDLLGF
ERFELIQELLEKRVDIVAAEERAVMETAASASSSSRKSRNQPQLPMQAGPIGPGVVIMSE
AEKKLMKKHRREERKQARAVAKAKKQLEEEGGDASDIKSILGFDPEAARLARERQLARAA
ARSVFASPSTAQRVEDRPKYPFVFDSALENRLKGAYVYGAKVMLPADATRTDSKTHESIV
IPPVQRRAPMTGERRVAVHDLNYVGQLAFQGYESLNRIQSIVFDTAYTTNHNLLICAPTG
AGKTNIAMLTVLRCIEQHIEQGVVQKDKFKIVYIAPMKALAAEMTETFGRRLAPLNLAVR
ELTGDMQLTKAEIIRTNMLVTTPEKWDVVTRKGMGDVALTQLVKLLIIDEVHLLHDERGA
VIESLVARTLRQVESSQSMIRIVGLSATLPNYVDVANFLRVNPHKGLFHFDGGFRPVPLQ
QSFVGVKGKNRFAVNDEMDKLCFDVVLENVLRGEQVMVFVHSRNGTLNTAARLIDLATKE
NQMAAFDCSDSKEFPLAQKAFARCKHKQLKSFLGNGFAVHHAGLLRSDRNVVEKYFAKKL
IKVLVCTATLAWGVNLPAHAVVIKGTELYDATRGQIVDLGILDVQQIFGRAGRPQFDTFG
EATLMTTHDKLSHYITRIMNQRPIESNFLSRLPDNLNAEVALGTVTDVREAVAWLSYTYL
YVRMLKNPHVYGLTPKEANEDVMLERHREKMIIEAARQLDDRRMLRFQETAGYLSSTDVG
RIASHFYISAETIEMYNTAFKPHMAEAELITMVAKSSEFTQIKVRDEELDELDYLKREYC
VLHPVLGGSENTYGKVNILLQAYISQAPLRSFSLTSDMNYVAKNAGRLLRGLFEIALRRS
LATLVPKLLTLCLCVDRRLWWHINTPLRQLGNFLPNEMYNKIEGRGMDLFEILDMPEDEL
GHWLRHVRMGDKVKQAAQLIPMIEMDAVIRPVTRTVLKVILTIEPAFNWRTRFHGKSQSW
WIIVEDPDTEHLYHTELFSLQADKCLARNESDRLQTLEFTIPIFEPLPTQYFVRAMSNHW
LGSETVIPLSFRDLILPQLHPPHTPLLDLQPLPTAALHDKKLEALYPYTHFNPVQTQVFH
TLYHTDHNALVGAPTGSGKTVAGELAIYRVMREYPGKKAVYIAPLKALVRERIEDWKVRF
GEKLGKKVVELTGDVTPDARAIERADVIVTTPEKWDGISRSWQSRNYVRKVVLLVIDEIH
LLGGDRGPVLEVIVSRTNYISAHTAHKVRVVGLSTALANAHDLANWLGITRAGLFNFKPS
VRPVPLTKHIQGFPGKHYCPRMASMNKPAYSAIRTHSPTKPALIFVSSRRQTRLTALDLI
SCCVSDDQPKQWLHMSEVEMESLLTTIRDANLRHALSFGIGMHHAGLHERDRKVVEELFL
NQKIQVLVATATLAWGVNLPAHLVIVKGTEFFDGKTKRYVDFDITDVLQMTGRAGRPQFD
DHGVAVIFVQDTKKHFYKKFMHEPFPVESSLAEQLPNHINAEIVAGTITSKQEAMDYLTW
TYFYRRLVMNPSYYGLTDTSQDDINQFLSELVEHTVAELEASRCVVIDDDQMSLEPDVFG
RIASYYYLQHETMRLFDREIVDHMNIQNILKVLAHAKEFEELPVRHNEDQLNAILAKQCP
IEVPASALDDPHVKTHLLLQAHFARLQLPIADYRTDTKSVLDQCMRVLQAMVDAAADAGF
LATALNIMHLAQMVAQGRWFSDSSLLALPFIEPAHVDVFARMNPSVLVLPQLVHFASEDR
RQAKQLLRRVLDEGRAHKVLSALDGLPRIRVSIAMHGVDASKLATDSEYTLKVELRRDNP
TRKRAAVAPRFPKPIDESWWLVIGNEATGELVALKRMGPILNSATTTITFYTPEEPGAHG
YSFYLMSSTYLGLDQQLSFRFTCTEQHDNDNDNDDDDDDDDDESMFDAKTRMRGVAVKEV
SPEVKA
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgatgacatcgccacaacaagccaccgcgctcatggagacgccgcggctgacgacggcg
ctgcgcacgttcacgagctacagcgaggatgaggaattcgcgcaaggtgttctctcggac
caggagctggaggcgctgatccaacgaaagaaggccaagcagcacgcagatctggatgag
tccgaggtgagcgacgcagaggacacagagtcagctgcagcgagtaagcagcaggatagc
agcggtgggcaggatgtcgtgatggcagagtttggcgtcaaggtggcctttgacaaggtt
cagtcacagacgctggacgagctgctgctggaggcccagcggtaccgtgcacgcgagcgc
gctcgccagctgcaaacagcgcggcgcgtgcaagctgaggagcaggcaaaggccaccaag
gttctcctcacgagcgcacgcaagccgggccagcgcaaagcgaaacagccgcagcaggct
gcagccccgaaagcgccgtcatcatcatcatcgccgccatcgtcgtccgcatcagcacaa
caagccgctgcatctggtggaccaggtgcgcacctgccccgcaagtggctgcgacagaag
tgccgccagcattttgacaccgctgctgcagacaacatccgcgcggccgtgtttgatctt
cttgccggcccaaagtccacagacgaattgcagaacgacctcttcgacctcctgggcttt
gagaggtttgagttgatccaggagctgctggagaagcgtgtggacattgtcgccgccgag
gagcgcgcagtcatggagactgctgctagcgcgtcgtcgtcttctcgtaaatcccgcaac
cagccgcagctgccaatgcaagcgggacccatcggcccgggcgttgtcatcatgtctgaa
gcagagaagaagctcatgaaaaagcacaggcgcgaggagcgaaagcaagcgcgtgccgtg
gccaaggcgaagaagcagcttgaagaggaaggcggcgacgcatcggacatcaagtccatc
ctcggtttcgatccagaagctgcgcggttggcgcgtgaacgacagctcgcccgcgccgct
gcccggagcgtctttgcatcgccgtccacagcgcagcgtgtggaggatcggcccaagtat
ccgtttgtgtttgattccgcacttgaaaaccgcttgaagggcgcgtatgtgtacggtgca
aaggtgatgctgcctgctgatgcgacgcgcaccgacagcaaaacgcacgagtccattgtc
attccaccggttcagcgtcgcgcgcccatgacgggggagcgacgggtggccgtccacgac
ctcaactacgttgggcagctcgccttccagggatacgagagcctcaaccgcatccagagc
attgtctttgacaccgcttacacgacaaaccacaacctcctcatctgtgccccaactggt
gccggaaagacaaacatcgccatgctcaccgtccttcgctgcatcgagcagcacattgag
caaggcgttgtacagaaggacaagttcaagattgtgtacattgctccaatgaaggccctt
gcagcagaaatgacagaaacattcggacggaggctggcgccgctcaacctggcagtgcgg
gagctgacgggtgacatgcagctgaccaaggccgagatcatccgcacgaacatgctcgtg
acaacgccagagaagtgggatgtggtgacgcgcaaagggatgggcgatgttgcgctgacg
cagctggtcaagctgctgatcattgacgaggtgcatctcctccacgacgagcgcggtgct
gtgatcgagtcactcgtggcccgcacccttcgccaggtcgagagctcccagtccatgatc
cgtattgttggcctgtccgccaccctcccaaactacgtggacgtcgccaactttctccgc
gtgaacccgcacaagggcctgttccactttgacggcgggttccggcccgtgccgctgcag
cagtcgtttgtcggcgtcaagggcaagaacaggtttgccgtcaacgatgagatggacaag
ctgtgcttcgacgtggtgctggagaacgtcctgcgcggggagcaggtgatggtgtttgtg
cactcgcgcaacggcacgctcaacaccgccgcgcgcctcattgacctcgccaccaaggag
aaccagatggccgcattcgactgctccgacagcaaggagtttcctctcgcccagaaggcc
tttgcccgctgcaaacacaagcagctcaagtccttcctcggaaacggattcgcggtccac
cacgccggcctgcttcgctccgatcgaaacgtcgttgagaagtactttgcaaagaagctc
atcaaggtgcttgtgtgcacggccacgcttgcctggggtgtgaaccttccagcacacgct
gtcgtcatcaaaggcacggagctctatgatgcgacgcgcggtcaaatcgtcgatttgggc
attcttgacgtgcaacagatctttggccgagcggggcgaccgcagtttgacacgtttggg
gaggcgacactgatgacaacgcacgacaagctgagccactacatcacgcgcatcatgaac
cagcggcccatcgagtcaaacttcctctcccggctgccagacaacctcaacgccgaggtg
gcgctgggcacggtgacagacgtcagggaggcggtggcctggctaagctacacgtacctg
tacgtgcgcatgctgaagaacccccatgtgtacgggctgacaccaaaggaggcgaatgag
gacgtgatgctggagcgccaccgcgagaagatgatcattgaagcggcacgacagctcgac
gaccggcgcatgctgcggttccaggagacggccgggtacctcagcagcaccgatgtgggc
aggattgccagccacttttacatcagcgcagagacaattgagatgtacaacacggcgttt
aagccgcacatggccgaagcagaactcattactatggtcgcaaagtcgtcagagtttacc
caaatcaaggtgcgagacgaagagcttgacgagctcgattacctcaagcgcgagtactgt
gtcctccaccccgtcctcggcggatcagagaacacgtacggcaaggtcaacatcctcctg
caggcctacatctcgcaagcgcccctgcgctcgttctcgctcacctccgacatgaattac
gtagcaaagaacgccggccgtctgctgcgtggtctctttgagattgcgctgcgccgcagc
ctggcaacacttgtgcccaagctgctcacgctctgcctgtgcgtggaccgccgcctgtgg
tggcacatcaacacgcccctgcggcagctcggcaacttcctgcccaacgagatgtacaat
aagattgaggggcgtggcatggatctgtttgagattctcgacatgcccgaagacgaactc
ggtcactggctgcggcacgtgcgcatgggagacaaggtgaagcaagctgcgcaattgata
ccgatgattgagatggatgctgtcatccgtccggtcacacggacggtcctgaaggtcatt
ctcaccatcgagcccgctttcaactggcgcacccgcttccacggcaaatcccagtcgtgg
tggatcatcgtcgaggacccggacacggagcacctgtaccacacggagctgttttccctc
caggcagacaagtgtcttgcacgcaacgaatccgaccgcctgcaaacgctggagttcacc
atccccatcttcgagccgctgccgacgcagtactttgtgcgcgccatgtccaaccactgg
ctcggctccgagacggtgatcccgctctccttccgcgacctcattctcccgcagttgcac
ccgccgcacacgcccctgctcgacctgcagccgctgccaacagcagcactacacgacaag
aagcttgaggcgctctacccgtacacgcacttcaaccccgtgcagacgcaggtgttccac
acgctgtaccacacggaccacaacgccctggtcggcgcgcccactggctccggcaagacg
gttgccggcgagctggccatctaccgcgtaatgcgcgaatacccggggaagaaggctgtg
tacatcgcccctctcaaggcgcttgttcgcgagcgcattgaggattggaaggtccggttt
ggggagaagcttggcaagaaggtggttgagttgactggcgacgtgacgccggatgctcgc
gccatcgagcgtgcagatgtcattgtcaccacacctgagaagtgggatggcatttcccgc
tcgtggcagagcagaaactacgttcgcaaggttgtgctgctggtgattgatgagatccac
ctccttggtggcgaccgtggtcccgtgctggaagtgattgtgtcgcgtacaaactacatt
tcggcgcacaccgcacacaaagtgcgtgttgtgggcctgtccactgcactcgccaacgcg
cacgacctggccaactggctcggcatcacgcgcgccggcctgttcaacttcaagccaagc
gtgcgccccgtgccgctcaccaagcacatccagggcttccccggcaagcactactgcccg
cgtatggcgagcatgaacaagcccgcatactctgccatccgcacgcactcgcccacgaag
ccagcgctcatcttcgtgtcgagtcgccggcagacgcgtctcaccgccctcgacctcatc
tcctgctgcgtctccgacgaccagccgaagcagtggctgcacatgagcgaggttgagatg
gaatccctcctcaccaccatccgcgatgcgaacctgcggcacgcgctcagctttggcatc
ggcatgcaccacgctggtctgcacgagcgcgatcgcaaggtggttgaggagctgttcttg
aatcagaagatccaggtccttgtcgccaccgcaacgctggcgtggggtgtcaacttgcct
gcccatctcgtgattgtgaaaggaacggagttcttcgacggaaagacgaagcgctacgtc
gactttgacatcacagatgtgctgcagatgacgggacgcgccggccgcccgcagtttgac
gatcacggtgttgctgtcatctttgtccaggacacgaagaagcatttctacaagaagttt
atgcacgagcccttccctgtggagagcagccttgctgagcagctgccaaaccacatcaac
gcagagattgttgccggcaccatcacctcgaagcaggaggcgatggactacctgacgtgg
acgtatttctaccgcagactggtcatgaacccgagctactacggtctcactgacacgtca
caggatgacatcaaccagttcttgtccgagcttgttgagcacacggttgcagagttggag
gcgtcgcggtgtgtggtgatcgatgacgaccagatgtcgcttgagccggatgtgtttggg
cgcattgcatcctactactatctccagcacgagacgatgcgcctctttgaccgcgagatt
gtcgaccacatgaacatccagaacatcctcaaggttctggcgcatgcgaaggagtttgag
gagctgcctgtgcgccacaatgaagaccaactcaacgccatcttggccaagcagtgtccg
atcgaggttcccgcaagtgcactcgatgatccacacgtcaagacgcacctccttctccag
gcccactttgcacgactgcaactgcccatcgctgactaccgcacggacaccaagtctgtg
ctggaccagtgcatgcgtgtgcttcaagcgatggtggacgcggctgccgacgccggcttc
ctcgccaccgctctcaacattatgcacttggcgcagatggttgcgcaagggcgctggttc
agtgactcctcgctccttgccctgccgttcatcgagcctgcccatgtggatgtgtttgcg
cgtatgaacccgagcgtgctcgtgctgccacagctggtgcactttgccagcgaggaccgt
cggcaagcgaaacagctgctgcggcgggtgctggatgagggtcgtgctcacaaggtcctc
tctgcgctggacggccttccccgtatccgcgtctccatcgccatgcacggtgtggatgca
agcaagctcgccacagactccgaatacacgctcaaggttgagctgcgtcgcgacaacccc
acgcgaaagcgggcggcggtggcgccacgcttccccaagcccattgacgagagctggtgg
ctcgtcatcggcaatgaggcgaccggggagctggttgctctgaaacgcatgggccccatc
ctcaactctgccaccaccaccatcaccttctacaccccagaggagcctggagcgcatggg
tattcgttctacttgatgtcctccacgtatcttgggctggaccagcagctctcgttccgc
ttcacgtgcacagaacagcacgacaacgacaacgacaacgacgacgacgacgacgacgac
gacgatgagagcatgtttgatgcgaagacgaggatgaggggtgtggctgtgaaggaggtt
tcgccagaagtcaaggcttga
DBGET
integrated database retrieval system
