KEGG   Salpingoeca rosetta: PTSG_01801
Entry
PTSG_01801        CDS       T04136                                 
Name
(RefSeq) PWI domain-containing protein
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
sre  Salpingoeca rosetta
Pathway
sre03013  Nucleocytoplasmic transport
sre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PTSG_01801
   03015 mRNA surveillance pathway
    PTSG_01801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_01801
   03041 Spliceosome [BR:sre03041]
    PTSG_01801
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PTSG_01801
Spliceosome [BR:sre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    PTSG_01801
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 16078376
NCBI-ProteinID: XP_004997782
UniProt: F2TZ02
LinkDB
Position
Unknown
AA seq 536 aa
MADAGFFRGTSHDQDSRFANKEKKLLKSMKFEPILDTPVDLRKVKLDTLRPWVTEKIIAL
MGFEDDVLIDFVFTQLEEGKSLDPKRMQINLTGFLNAKNARVFMGELWSHLVSASKSELG
ISQELIQSKAREIQQAEAEKQRVSEGILQAERRTQGGRRNRWGAPAAPGAMMPPPAPPAA
AMQPGLLPAPPVGMHPMQGMPGAQGMLPTPAQQQQLLEQAKQRAQALAQAAPPARPAPTT
ATAPTAAPTTTTAATASNGAGVGAGADEEKRVRRSRDRSPSPPRRPRRHSRSPSRTRNRY
RSRYDRDDDRDDYRRSRDRRMRPRYRRSRSRSRDRYRDRDYEGDRGGRYRSRRYDDDGDG
DDRRARREDRRRRGSRYGDEEREEDDTGRRRRAGSGDDGSGAGSGVVSADDDDDRRRHRR
RKHRKHRSRSRSRSPGRERSSRKKHKKKRSRRRDRSRTPSEDDGSGADAGNTSDAANRRS
HSPADEDAETKEKRLKEMLLAKKKQEEQEEQEEDKPSNDADVDGHDDENTNKEQQA
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggccgacgcaggcttctttcggggaacgtcccatgatcaggactcccgattcgccaac
aaggagaagaagttgctcaagagcatgaagtttgagcccatcctcgatacaccggttgac
ctgagaaaagtgaagctggacacgctgcgaccatgggtcacggagaagatcatcgctctc
atgggcttcgaggatgacgtcctcatcgactttgtcttcacccagcttgaggaaggaaag
tcgcttgatccaaagcgcatgcagatcaacctcaccggcttcctcaacgccaagaacgcg
cgcgtgttcatgggcgagctgtggtcgcacctcgtctccgcgtccaagagcgagcttggc
atttcacaggagctcatccagagtaaagcccgcgaaatccagcaagcagaggcggagaag
caacgcgtctcagagggcattctccaagcagagcgccggacccagggcggccggcgtaac
cggtggggtgcacctgctgcccctggcgccatgatgccgccgcccgcgccgcccgccgcc
gccatgcagcccggccttctcccagcgccaccagtcggaatgcatccaatgcaaggcatg
ccgggtgcacagggcatgctccccacgcccgcgcagcagcagcagctcttggagcaggcc
aaacagcgcgcgcaagcgcttgcacaagccgccccaccagcacgcccagcacctaccaca
gcaacagcacccacagcagcacccaccacaacgacagcagcgacggcaagcaatggcgct
ggtgttggcgctggtgctgacgaagagaagcgggtgcgcaggagtcgggaccggtcgccg
tcgccgccgcgtcgcccacgccgccacagccgcagtccgagccgcacccgcaacagatac
cgcagccgctacgaccgcgatgatgaccgcgatgactaccgccgcagcagagaccgccgc
atgcgcccccgctaccgccgcagccgcagccgcagccgtgatcgctaccgtgaccgcgac
tacgagggcgaccgcggtgggcggtacaggagcaggcggtacgatgacgatggcgacggt
gacgaccgccgcgcccgccgcgaagacaggcggcgtcgcggcagcagatacggtgatgag
gagcgtgaggaggacgacaccggtaggcgccgccgcgcaggtagcggcgacgatggcagc
ggtgcgggcagcggtgttgtgagtgctgatgatgacgatgaccgtcgccgccaccgccgc
cgtaaacatcgcaagcaccgcagccgcagccgcagccgcagcccaggccgggaaaggagt
agccggaagaagcacaagaagaagcgcagccggcggcgggaccgatcgcgcacgccaagc
gaggatgacggctctggtgcggatgcagggaacaccagcgatgctgccaaccgtcgctct
cactcaccagcagacgaggatgcagagaccaaagagaagcggctgaaggagatgttgctg
gcgaagaagaagcaggaggagcaggaggagcaggaggaggacaagccatccaatgatgct
gatgttgatggtcatgatgacgaaaacaccaacaaggaacagcaggcttga

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