Salpingoeca rosetta: PTSG_01801
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Entry
PTSG_01801 CDS
T04136
Name
(RefSeq) PWI domain-containing protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
sre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_01801
03015 mRNA surveillance pathway
PTSG_01801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_01801
03041 Spliceosome [BR:
sre03041
]
PTSG_01801
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PTSG_01801
Spliceosome [BR:
sre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
PTSG_01801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
16078376
NCBI-ProteinID:
XP_004997782
UniProt:
F2TZ02
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MADAGFFRGTSHDQDSRFANKEKKLLKSMKFEPILDTPVDLRKVKLDTLRPWVTEKIIAL
MGFEDDVLIDFVFTQLEEGKSLDPKRMQINLTGFLNAKNARVFMGELWSHLVSASKSELG
ISQELIQSKAREIQQAEAEKQRVSEGILQAERRTQGGRRNRWGAPAAPGAMMPPPAPPAA
AMQPGLLPAPPVGMHPMQGMPGAQGMLPTPAQQQQLLEQAKQRAQALAQAAPPARPAPTT
ATAPTAAPTTTTAATASNGAGVGAGADEEKRVRRSRDRSPSPPRRPRRHSRSPSRTRNRY
RSRYDRDDDRDDYRRSRDRRMRPRYRRSRSRSRDRYRDRDYEGDRGGRYRSRRYDDDGDG
DDRRARREDRRRRGSRYGDEEREEDDTGRRRRAGSGDDGSGAGSGVVSADDDDDRRRHRR
RKHRKHRSRSRSRSPGRERSSRKKHKKKRSRRRDRSRTPSEDDGSGADAGNTSDAANRRS
HSPADEDAETKEKRLKEMLLAKKKQEEQEEQEEDKPSNDADVDGHDDENTNKEQQA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcaggcttctttcggggaacgtcccatgatcaggactcccgattcgccaac
aaggagaagaagttgctcaagagcatgaagtttgagcccatcctcgatacaccggttgac
ctgagaaaagtgaagctggacacgctgcgaccatgggtcacggagaagatcatcgctctc
atgggcttcgaggatgacgtcctcatcgactttgtcttcacccagcttgaggaaggaaag
tcgcttgatccaaagcgcatgcagatcaacctcaccggcttcctcaacgccaagaacgcg
cgcgtgttcatgggcgagctgtggtcgcacctcgtctccgcgtccaagagcgagcttggc
atttcacaggagctcatccagagtaaagcccgcgaaatccagcaagcagaggcggagaag
caacgcgtctcagagggcattctccaagcagagcgccggacccagggcggccggcgtaac
cggtggggtgcacctgctgcccctggcgccatgatgccgccgcccgcgccgcccgccgcc
gccatgcagcccggccttctcccagcgccaccagtcggaatgcatccaatgcaaggcatg
ccgggtgcacagggcatgctccccacgcccgcgcagcagcagcagctcttggagcaggcc
aaacagcgcgcgcaagcgcttgcacaagccgccccaccagcacgcccagcacctaccaca
gcaacagcacccacagcagcacccaccacaacgacagcagcgacggcaagcaatggcgct
ggtgttggcgctggtgctgacgaagagaagcgggtgcgcaggagtcgggaccggtcgccg
tcgccgccgcgtcgcccacgccgccacagccgcagtccgagccgcacccgcaacagatac
cgcagccgctacgaccgcgatgatgaccgcgatgactaccgccgcagcagagaccgccgc
atgcgcccccgctaccgccgcagccgcagccgcagccgtgatcgctaccgtgaccgcgac
tacgagggcgaccgcggtgggcggtacaggagcaggcggtacgatgacgatggcgacggt
gacgaccgccgcgcccgccgcgaagacaggcggcgtcgcggcagcagatacggtgatgag
gagcgtgaggaggacgacaccggtaggcgccgccgcgcaggtagcggcgacgatggcagc
ggtgcgggcagcggtgttgtgagtgctgatgatgacgatgaccgtcgccgccaccgccgc
cgtaaacatcgcaagcaccgcagccgcagccgcagccgcagcccaggccgggaaaggagt
agccggaagaagcacaagaagaagcgcagccggcggcgggaccgatcgcgcacgccaagc
gaggatgacggctctggtgcggatgcagggaacaccagcgatgctgccaaccgtcgctct
cactcaccagcagacgaggatgcagagaccaaagagaagcggctgaaggagatgttgctg
gcgaagaagaagcaggaggagcaggaggagcaggaggaggacaagccatccaatgatgct
gatgttgatggtcatgatgacgaaaacaccaacaaggaacagcaggcttga
DBGET
integrated database retrieval system