Salpingoeca rosetta: PTSG_01945
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Entry
PTSG_01945 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_01945
Enzymes [BR:
sre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTSG_01945
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
90S particles
Helicases
PTSG_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Auxin_canalis
Motif
Other DBs
NCBI-GeneID:
16078523
NCBI-ProteinID:
XP_004997928
UniProt:
F2TZE8
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MGQKGKRGGHQGRIGRNGRNGRVLSKRALEKKKDDEEIQQLEERIQEDYDVAGFKLFTEF
PISNRTKKGLADAGFIKPTRIQKATLKHALAGRDVLGAAKTGSGKTLAFLIPVLEKLNRE
RFSRDLGIGAVVVSPTRELAQQTYNTLVQVATGHEMSCALFIGGNNVKIEKTMAATRNII
ICTPGRLVQHMDETPNFGFDNLQVLVLDEADRLLDSGFKEEVDRIVSEMPPHRQTLLFSA
TQTAEVDELARLSLHNPVFINVHKDQAATPARLKQCYVEVPLHEKINLLYSFIESHKKHK
TMVFLACRKQVNLLYKIFCRRKPGVSIFELVGRRSLHTRQETLRKFSKAKAAVLLTTDVA
ARGLDIPNVNWVLQVDCPESVDTYIHRVGRTARFGKNGNAMLFLLPSELNMVKQLEGRKV
PIARKEISARAVRSIVETMRREYATDPDMLMLGKQYFVRYVRSVYNQANKDVFKVHALPL
ESFAMSLGLPTAPNVRIGGKHITQIQAAQASKERAGAQTVTKEEEEGSSGESDESAGEEV
DAAMRNTNIADDDDDDDDDDDDDDEDDDDDEDDDDDDEDDDDDDDDDDDGERVTLDSDDD
EAEKKPKKQLTKFQRMMARKNKDVLSAAFNKLHELGEQDDDLLVQRTTQTHEEIDPSDKK
PAVLSKRKQKEMQRQTRAAVLKRQLRHNERYVFDDEGNAIKMGPKLVGLDMSKKDIADQF
SPEDDTLVQEVKQDMENFHEIDKKLERQRIKEKKMQRKQKERERRAEAMEAMGLGGVAPM
IGGADYDDAAVESDDDGNERQDEATYGDSSDGEEDEAGNAGEEDWLLDEDDEDLLPKKKA
KKSKV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggggcagaaaggcaagaggggtggtcaccagggccgtatcgggcgcaacgggcgcaat
gggcgtgtgctgagcaaacgtgcgctggagaagaagaaggacgacgaagagatccagcag
cttgaagaacgcatccaggaggattacgatgtggcaggcttcaagctgtttacagaattc
cccatctcaaaccgcaccaagaaagggctggcggatgcggggttcatcaaaccaacccgc
attcaaaaagcaaccttgaagcatgcactggccggccgtgatgtgctcggtgctgcaaag
acgggctctggcaagacgcttgcgttccttattcccgtgctggagaaactcaaccgcgag
cgcttcagccgcgatttgggcattggcgccgtcgtcgtctccccaacacgcgagcttgca
cagcaaacatacaacacactcgtccaagtcgcaaccggccacgagatgtcgtgtgcgctc
ttcattggaggaaacaacgtgaagattgagaagacgatggctgcgaccagaaacatcatc
atctgcacacctggtcgcctcgtgcaacacatggacgaaacaccaaactttggctttgac
aaccttcaggtgctggtgcttgacgaagcggaccgcctgcttgacagcggcttcaaggag
gaggtcgatcgcattgtcagcgaaatgcccccgcaccgccaaaccctcctgttctctgcg
acgcaaacggcggaggtggacgagcttgcccgcctcagtctccacaacccggtcttcatc
aacgtgcacaaggaccaagcggcgacacctgcgcggctgaagcagtgctacgtcgaagtg
ccgctgcacgagaagatcaacctcctttattcgttcatcgaatcccacaagaagcacaag
accatggtcttcctcgcctgccgcaagcaggtgaacctgctgtacaaaatcttttgtcgt
cgcaagccgggcgtatccatctttgagctcgttggccgccgttccctccacacgcgccag
gagacgctgcgcaagttctcaaaggccaaggccgcggtgctgctgacgacggacgttgct
gcgcgtggactggacattccaaacgtcaactgggtgctgcaggtcgactgtccggaatcc
gtggacacatacatccatcgcgtggggcggactgcgcggtttggcaagaacggcaacgcc
atgctgtttctcctgccgtctgagctgaacatggtgaagcagcttgaggggcgcaaggtg
ccgattgcccgcaaggaaatctccgcacgcgctgtccgctccattgtggagacgatgcgg
cgcgagtatgcgacagacccggacatgctgatgctcggaaaacagtattttgtgcgatat
gtacgctcggtgtacaatcaagcaaacaaggacgtgttcaaggttcacgctctgccactt
gagtcgtttgcaatgtcgctgggtctgccaactgcacccaatgtccgcatcggtggcaag
cacatcacgcagattcaggcggcacaagccagcaaggagcgggctggcgcacagactgtc
acaaaggaagaggaggagggcagcagtggtgaaagcgatgagagtgcgggagaggaggtg
gacgcggccatgcgcaacaccaacattgctgatgacgatgacgatgacgatgatgatgat
gatgatgacgatgaggatgatgatgatgatgaggatgatgatgacgacgatgaggatgat
gatgatgatgacgatgatgatgatgatggggaacgcgtgacgcttgacagcgatgatgac
gaggcagaaaagaagccaaagaagcagctgaccaagttccagcgcatgatggctcgcaag
aacaaggatgtgctgagcgctgcgttcaacaagctgcacgaacttggggagcaagatgac
gacctccttgttcagcggacgacgcagacgcacgaggaaattgatccgagcgacaagaag
cccgccgtgctctccaagcgcaagcagaaggagatgcagcgacagacgcgcgctgccgtc
ctgaagaggcaactgcgacacaacgagcgctatgtctttgatgacgaaggcaatgccatc
aagatgggtcccaagcttgttggtctggacatgagcaagaaggatattgcagatcaattc
tcgcctgaagatgacacgcttgtgcaagaagtgaaacaggacatggaaaacttccatgag
attgacaagaagctggagcgtcagcgcatcaaagagaagaagatgcagcggaagcagaag
gagcgagagcgacgtgccgaggcgatggaggcgatgggtcttggcggcgtggcacccatg
attggcggcgcagactacgacgatgccgccgtggagagcgacgatgatggcaacgagcgg
caggacgaggccacatacggggacagcagtgatggagaagaagatgaagctggcaacgct
ggcgaggaggactggttgctggatgaggacgatgaagatttgctgccgaagaagaaggcg
aagaagtccaaggtctga
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