Salpingoeca rosetta: PTSG_02102
Help
Entry
PTSG_02102 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K15434
protein FAM98B
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_02102
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PTSG_02102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2465
Flu_PB2_1st
Erf4
Motif
Other DBs
NCBI-GeneID:
16077178
NCBI-ProteinID:
XP_004996587
UniProt:
F2U2M8
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MSVPEARSDAILDALEDLAYSPLPGPDDLDEALLEGVDSPLFVAICVFLSNAITKARRLE
TVVSSGDDTSALLIELSSFLQEAGCPFDEFEKDTFAAVRDLTSRINLLEWLCSEAQTARM
IRSQTSDKMDVATDFGTSAEDRLASVLSTLGLSDRAQSTTSEIFSAITARIQHLMKQAGQ
NYIEPPILSHKLSPEQWAKLEDINAQLSEEYAVRRQMLLKRIDVTIQSFKWSDRVKKSLD
ELERSTQPLRHTMTTASDVDVHDVLFASRDLLNISKTSGAAVRHATAKSKIRGIFIGDVP
DRGGRPTEQRAPGMMPAFRKRTVTARPQRNKRGNGGGVGGGGRNSGGGGGRRRGKKGGRV
QGGWSKS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgccagaggcgcgctcggacgccatcttggatgccttggaagacctggcgtac
tcgccgcttcctggccctgatgacttggatgaggcactactggaaggcgtggattctcca
ctctttgttgccatctgcgtgttcctctcaaacgccatcacaaaggccaggcgcctggag
actgtcgtgtccagtggtgatgacacatctgccctgctgattgagttgagctcgttcctg
caagaagccgggtgcccatttgatgagtttgaaaaggacacgtttgccgccgtccgcgat
ctgacatcacgcatcaacctgctggaatggctgtgctccgaggcccagacagcacgcatg
atccgctcacagaccagtgacaaaatggacgtcgccacagattttggtacaagcgcggag
gatcgcctcgccagcgtcctgtcgaccctcggcctctccgaccgtgcacagtctaccacg
tctgaaatcttctccgccatcaccgcgaggattcaacatctgatgaagcaggctggacaa
aactacattgagccacccatcctctcccacaaactctcgccagagcaatgggccaagctt
gaggacatcaacgcgcagttgtctgaggagtatgcggtgcggcggcagatgctgctcaag
cgaatcgacgtcaccatccagtccttcaagtggtctgacagggtcaagaaatcgcttgat
gagcttgagcgcagcacacagccgctgcgtcacacaatgacaacagccagcgacgtggac
gtgcacgatgtcctctttgcttccagagacctgctgaacatctccaagacgagcggtgct
gctgtccgccacgccaccgcaaagtcgaagatccgtggcatcttcatcggcgatgttccc
gaccgtggtggccgcccgacagagcagcgcgctccaggcatgatgccggccttcagaaag
cgcactgtaacggcccggcctcagcgcaacaagcgcgggaacggtggtggtgttggcggc
ggcggtcgcaacagtggcggtggcggtggacgtcggcgtggcaagaaaggaggcagggtg
caaggaggttggagcaagagctga
DBGET
integrated database retrieval system
