Salpingoeca rosetta: PTSG_02292
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Entry
PTSG_02292 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K11374
elongator complex protein 2
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_02292
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PTSG_02292
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_Aladin
PEP5_VPS11_N
VPS11_N
Motif
Other DBs
NCBI-GeneID:
16077374
NCBI-ProteinID:
XP_004996781
UniProt:
F2U1S5
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MAEDDNVRVQHVLASAGVNSDTGCLDWNTDSDVVAYAASCFVFINHNSASADVPQKVQQT
CTGHSARVNCVRWMRHVDDAGSVSFAPSLLVTGSSDKTLRLWRKSADVPHTWSTVQVLKE
HAESVTDVEARSFSSGRAIIASSAGDETVRLWQSHKPSEPFELLQVIATPRHYMMALSLA
LLPSTDRLVLACGGDDMRVHVYAETASDGLVHQDSLPGHEDWVRSLDFTTIHTADGSKAL
LLASGAQDCFIRLWKIAQQTPLAAQQQQKQDKFEAMLQTSERIFHVDGLTFCSSLDALLA
GHENKSGMWLDGARMGEVGGNTLGFFGAVFGPRAQHVLGHSFHGALHHWEAGSSSSSWTP
RVVVSGHFKGVYDLDWSPSGDYLLTCSDDQTTRLFAPWQHARTTDAWHELGRPQVHGYDL
RCLAVIDDSSFASGADEKVLRVFEAPQSFFTSFQTITGTSLTQLGQSVAVKGRALGASVP
ALGLSNKPVYEGDTTHANKDTDSHTQYFRSTTDDAVFPFESEQLQQPPFEAQLVQNTLWP
ETRKLYGHGYELMCVACDHQRTVLVSACKATKPEHAALRLWSIQSGLEVAQLPGHKLTVV
KVSFSPDDRWLVSVSRDRAFCVYERVETEAGPSYELRFTHAKAHDRIIWDVAWVPDSKHF
ITGARDKHVKVWAVADSGEATCTCTLPKFPDSVTALAVTADTRPSSSSPSSSSSSSSALM
LAVGLDKGAVHLHRSADNGSTWAQVHVLDDGMAHRATVRRLKWRPNSSDDAAHQQGLYLA
SCGLDHVVRINLVA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggacgacaacgtgcgtgtgcagcatgtgctggcgagcgctggggtgaacagc
gatacgggctgcttggattggaacacggacagcgacgtggtcgcatatgctgcttcctgc
ttcgtctttatcaaccacaactcggcgagcgctgatgtgccgcagaaggtgcagcagaca
tgtacgggccattcggcccgcgtcaactgcgtgcggtggatgaggcatgtggacgatgcc
ggcagcgtctccttcgcaccaagtttgcttgtcacgggctcatcagacaagacgctcagg
ctgtggaggaagagtgcagacgtgcctcacacatggagcacggttcaagttctcaaggaa
cacgccgagtctgtcacggacgtggaggcgcgctccttctcctctggtcgcgccatcatt
gcctccagtgccggtgatgagacggtcaggctatggcagagccacaagccttcagagccg
tttgagctgttgcaagtcattgccacgccacggcactacatgatggccctgagcctagcc
ctgcttccctccacagaccggttggtgctggcctgtggtggtgacgacatgcgcgtgcat
gtgtatgccgagacggcgtctgatggcctcgtgcaccaggactcacttcctggccacgaa
gattgggttcgcagcctcgactttaccaccatacacactgccgacggatcgaaagcgctg
ctcttggcgagtggggcgcaggactgcttcatccgcctctggaagattgcccaacaaacg
ccactggccgcacagcagcagcagaaacaagacaagtttgaggcgatgctgcagacatcg
gagcgcatcttccacgtggatggcctcacgttttgctcaagcctggatgcgctgctggct
ggccacgaaaacaagtctgggatgtggctcgacggggcgcgtatgggggaggttggcggc
aacacgcttgggttctttggcgccgtgtttggcccgcgtgcacagcatgtgcttggacac
agtttccacggagcactgcatcactgggaagccggctcgtcctcttcctcctggaccccg
cgcgtcgtcgtcagcggccacttcaagggcgtgtacgaccttgactggagccccagcggc
gactatctgctcacctgctccgacgaccagaccacccgcctcttcgccccctggcagcat
gcccgcaccactgatgcgtggcacgagcttgggcgcccacaggtgcacggctacgacctg
cgctgcctcgctgtgattgacgattcctcctttgccagcggcgccgatgagaaggttctt
cgcgtcttcgaagcgccacagagtttcttcacgtcgttccagactatcacaggcacctcc
ctcacgcagctcgggcagtctgtcgctgttaagggccgcgcacttggcgccagcgtccct
gccctcggcctctcaaacaagcccgtgtatgaaggggatacgacacatgccaacaaggac
accgacagccacacacaatactttcgatcgacaacagatgacgccgtgttcccctttgaa
tccgaacagctccaacagccgccgtttgaggcgcagctggtgcagaacacgctgtggccg
gagacgcgcaagctgtacggccacggttatgagctcatgtgcgtggcgtgcgaccaccag
cgcaccgttctcgtgtctgcgtgcaaggccacgaaaccggaacacgccgcccttcgcctc
tggagcattcagtcgggcctcgaggttgcacaacttccaggccacaagctgacggtggtg
aaagtttccttttctccggacgaccgctggctcgtgtccgtttcgcgtgatcgtgccttc
tgcgtgtacgaacgcgtcgagacagaagcaggtccttcgtacgaactccgatttacacat
gcgaaagcacacgatcgcatcatctgggatgtggcatgggtgcctgacagcaagcacttc
atcactggtgcgcgcgacaagcacgtgaaggtgtgggccgttgctgactcgggtgaggcc
acgtgcacgtgcacgctgcccaagttcccagacagcgtcactgccctcgccgttacagcc
gacacccgcccctcctcatcgtcaccatcgtcgtcatcatcctcatcgtcagcgttgatg
ctggctgttgggctggacaaaggggcggttcatctccaccgctctgcagacaacggcagc
acgtgggcgcaggtgcatgtgcttgacgatggcatggcacaccgcgcaaccgtccgccgc
ctcaagtggcgccccaacagctccgacgacgccgcacaccagcagggtctctacttggcg
tcgtgcggcctggatcacgtcgtgcgcatcaacttggtcgcataa
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integrated database retrieval system