KEGG   Salpingoeca rosetta: PTSG_02292
Entry
PTSG_02292        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K11374  elongator complex protein 2
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sre03016]
    PTSG_02292
Transfer RNA biogenesis [BR:sre03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    PTSG_02292
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EML NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_Aladin PEP5_VPS11_N VPS11_N
Other DBs
NCBI-GeneID: 16077374
NCBI-ProteinID: XP_004996781
UniProt: F2U1S5
LinkDB
Position
Unknown
AA seq 794 aa
MAEDDNVRVQHVLASAGVNSDTGCLDWNTDSDVVAYAASCFVFINHNSASADVPQKVQQT
CTGHSARVNCVRWMRHVDDAGSVSFAPSLLVTGSSDKTLRLWRKSADVPHTWSTVQVLKE
HAESVTDVEARSFSSGRAIIASSAGDETVRLWQSHKPSEPFELLQVIATPRHYMMALSLA
LLPSTDRLVLACGGDDMRVHVYAETASDGLVHQDSLPGHEDWVRSLDFTTIHTADGSKAL
LLASGAQDCFIRLWKIAQQTPLAAQQQQKQDKFEAMLQTSERIFHVDGLTFCSSLDALLA
GHENKSGMWLDGARMGEVGGNTLGFFGAVFGPRAQHVLGHSFHGALHHWEAGSSSSSWTP
RVVVSGHFKGVYDLDWSPSGDYLLTCSDDQTTRLFAPWQHARTTDAWHELGRPQVHGYDL
RCLAVIDDSSFASGADEKVLRVFEAPQSFFTSFQTITGTSLTQLGQSVAVKGRALGASVP
ALGLSNKPVYEGDTTHANKDTDSHTQYFRSTTDDAVFPFESEQLQQPPFEAQLVQNTLWP
ETRKLYGHGYELMCVACDHQRTVLVSACKATKPEHAALRLWSIQSGLEVAQLPGHKLTVV
KVSFSPDDRWLVSVSRDRAFCVYERVETEAGPSYELRFTHAKAHDRIIWDVAWVPDSKHF
ITGARDKHVKVWAVADSGEATCTCTLPKFPDSVTALAVTADTRPSSSSPSSSSSSSSALM
LAVGLDKGAVHLHRSADNGSTWAQVHVLDDGMAHRATVRRLKWRPNSSDDAAHQQGLYLA
SCGLDHVVRINLVA
NT seq 2385 nt   +upstreamnt  +downstreamnt
atggcggaggacgacaacgtgcgtgtgcagcatgtgctggcgagcgctggggtgaacagc
gatacgggctgcttggattggaacacggacagcgacgtggtcgcatatgctgcttcctgc
ttcgtctttatcaaccacaactcggcgagcgctgatgtgccgcagaaggtgcagcagaca
tgtacgggccattcggcccgcgtcaactgcgtgcggtggatgaggcatgtggacgatgcc
ggcagcgtctccttcgcaccaagtttgcttgtcacgggctcatcagacaagacgctcagg
ctgtggaggaagagtgcagacgtgcctcacacatggagcacggttcaagttctcaaggaa
cacgccgagtctgtcacggacgtggaggcgcgctccttctcctctggtcgcgccatcatt
gcctccagtgccggtgatgagacggtcaggctatggcagagccacaagccttcagagccg
tttgagctgttgcaagtcattgccacgccacggcactacatgatggccctgagcctagcc
ctgcttccctccacagaccggttggtgctggcctgtggtggtgacgacatgcgcgtgcat
gtgtatgccgagacggcgtctgatggcctcgtgcaccaggactcacttcctggccacgaa
gattgggttcgcagcctcgactttaccaccatacacactgccgacggatcgaaagcgctg
ctcttggcgagtggggcgcaggactgcttcatccgcctctggaagattgcccaacaaacg
ccactggccgcacagcagcagcagaaacaagacaagtttgaggcgatgctgcagacatcg
gagcgcatcttccacgtggatggcctcacgttttgctcaagcctggatgcgctgctggct
ggccacgaaaacaagtctgggatgtggctcgacggggcgcgtatgggggaggttggcggc
aacacgcttgggttctttggcgccgtgtttggcccgcgtgcacagcatgtgcttggacac
agtttccacggagcactgcatcactgggaagccggctcgtcctcttcctcctggaccccg
cgcgtcgtcgtcagcggccacttcaagggcgtgtacgaccttgactggagccccagcggc
gactatctgctcacctgctccgacgaccagaccacccgcctcttcgccccctggcagcat
gcccgcaccactgatgcgtggcacgagcttgggcgcccacaggtgcacggctacgacctg
cgctgcctcgctgtgattgacgattcctcctttgccagcggcgccgatgagaaggttctt
cgcgtcttcgaagcgccacagagtttcttcacgtcgttccagactatcacaggcacctcc
ctcacgcagctcgggcagtctgtcgctgttaagggccgcgcacttggcgccagcgtccct
gccctcggcctctcaaacaagcccgtgtatgaaggggatacgacacatgccaacaaggac
accgacagccacacacaatactttcgatcgacaacagatgacgccgtgttcccctttgaa
tccgaacagctccaacagccgccgtttgaggcgcagctggtgcagaacacgctgtggccg
gagacgcgcaagctgtacggccacggttatgagctcatgtgcgtggcgtgcgaccaccag
cgcaccgttctcgtgtctgcgtgcaaggccacgaaaccggaacacgccgcccttcgcctc
tggagcattcagtcgggcctcgaggttgcacaacttccaggccacaagctgacggtggtg
aaagtttccttttctccggacgaccgctggctcgtgtccgtttcgcgtgatcgtgccttc
tgcgtgtacgaacgcgtcgagacagaagcaggtccttcgtacgaactccgatttacacat
gcgaaagcacacgatcgcatcatctgggatgtggcatgggtgcctgacagcaagcacttc
atcactggtgcgcgcgacaagcacgtgaaggtgtgggccgttgctgactcgggtgaggcc
acgtgcacgtgcacgctgcccaagttcccagacagcgtcactgccctcgccgttacagcc
gacacccgcccctcctcatcgtcaccatcgtcgtcatcatcctcatcgtcagcgttgatg
ctggctgttgggctggacaaaggggcggttcatctccaccgctctgcagacaacggcagc
acgtgggcgcaggtgcatgtgcttgacgatggcatggcacaccgcgcaaccgtccgccgc
ctcaagtggcgccccaacagctccgacgacgccgcacaccagcagggtctctacttggcg
tcgtgcggcctggatcacgtcgtgcgcatcaacttggtcgcataa

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