KEGG   Salpingoeca rosetta: PTSG_02318
Entry
PTSG_02318        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K12587  exosome complex component MTR3
Organism
sre  Salpingoeca rosetta
Pathway
sre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PTSG_02318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_02318
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     PTSG_02318
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 16077400
NCBI-ProteinID: XP_004996807
UniProt: F2U1V1
LinkDB
Position
Unknown
AA seq 221 aa
MTIMAARQQRPTTSVVPPQAASAAEVSDASADGAKAQPRSVFAEVGVVSQAKGSAFFEIG
NTKVVAACYGPLSTSRRQGFQETCILDCDVKFSPFSGVKHQQTKQTALERELSQLLESSL
KPCVCVSKYPKSVIQVYATVLQDDGAAFSAVINAASMALANAGIEMFDLLAAASVCFDTS
GGLHPHPTRDEEAAKVHAYNPMRLPKGLFVSLQSLLLLLLL
NT seq 666 nt   +upstreamnt  +downstreamnt
atgacaatcatggctgcacgccaacagcgacccacaaccagcgtggtgcctccgcaggca
gcttctgctgccgaggtctctgatgcctctgctgacggggcaaaggcgcagccacgaagc
gtgttcgcagaggtgggcgtcgtgagccaggcaaagggatccgcctttttcgaaattggc
aacacaaaagtcgtcgcagcatgctacgggccgctgtcaacgtcgagaagacaagggttc
caggaaacgtgcatcctcgactgtgacgtcaagttcagtcctttttctggtgtcaagcat
cagcaaacaaagcagactgcgctggaacgagagttgtcacagctgttggagtccagtttg
aagccatgcgtgtgcgtcagcaagtaccccaagtctgtcattcaggtgtacgcgaccgtc
ctgcaagacgacggcgcagcgttctctgcagtcatcaacgctgcgtcgatggcgctggcg
aacgccggcattgagatgtttgatctcctcgccgctgcatccgtgtgctttgacacgagc
ggcggcctgcacccccacccaacaagagacgaggaagcagcaaaggtgcacgcatacaac
cccatgcgcctgcccaaaggcctctttgtttcgctgcagtcgctgctgttgctgctgctc
ctctag

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