Salpingoeca rosetta: PTSG_02406
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Entry
PTSG_02406 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_02406
Enzymes [BR:
sre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PTSG_02406
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PTSG_02406
Prokaryotic type
PTSG_02406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
16077489
NCBI-ProteinID:
XP_004996897
UniProt:
F2U241
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MQAISTWTRACASACAFAGPRFRAVIPLKRLPKTRALIDAPLHSLSSTTASRPSSTFTMS
AVSYLQIVAGSCDTGPSAFIFTDDRRYLFNTGEGIQRFCMEHKIRLKQVTDIFFTKSSWE
CIGGLPGMLLTMQDMYQVSHPVALHAPPHLSTMLEGTKTFMQHRSSLYREFREYTDPVSE
FDDGRLRMKIFTIHARDQTPALHPHVISALKQQKYMEQAAPPVSQNIGAEFDHHATHEPH
TLPAKKVRLQPKQDQSPGQQQQQQQQQQQPSAGNGHDAARQRTPSPISSRLESASPPPHP
APQLTLVPPTAEETLAAAESTRDTALAYVGSLVNPRPGKFNVQKAKAAGVPKGPLWGQLG
KGNEVTLDDGRVVKPEDVLDPVDPLPHFAIVHIPTRAALEATIARSELFDAFRAMPSSMP
KVVHFTSQALAQTDAYAQLLQQFGPNVTHVFVDPQHNPHATTISSTKLQYMLQTIGPTPF
AMAPVPSTVPELTVPHALPDNCSVVSAQPLYRVFLSKRRDGLLTDATTCLPIVSPEECRE
TVMALPDMQRLLPQQNEHAQAPPPTTAPPTTTTPAKAPPTTTTTATATASGTGGDSLAAL
RPDERVLHFMGTGSAVPSQLRNVTGMLLTRGIWVDSDGATTVNKDVAASMLLDCGEGSLS
QLQRKFGAEHMPAVLRSLRLVHISHMHADHHLGLTRVLARRREAFAAVGVDDPPPVVVVA
PHFLWLFMRYTAHLSCATAVFLDARWTRFAHWQLPRFVPPHVKDAYARAMAGMGLRALAT
PAVKHCFAAYGLVLDFDDGYRFAWSGDTRPCKSMVGAGKGADVLVHEATFEDGLEDQAVQ
KNHSTTSDAVTVAQQMGAKMLILTHFSQRYPQIPVLDAKSREHTAFGFDLMSVVLRRAKE
LTAMTPAIDHMFTALKPEEEEEEGDDDGDIETIGGADGNAKGKGEKKGKDKVKAKVKGNG
KGGGVKVDDVARGRKQQKQKQPKESKQTAAVKEVRTDADQQQAS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccatttccacctggacccgtgcgtgtgcatctgcgtgtgcgtttgcaggtcct
cgattccgcgctgtgatcccgctcaagcggctgccgaagacacgcgccctcatcgacgct
ccactgcactcattatcatcaactactgcaagtcgtccaagttccaccttcaccatgagc
gccgtctcctatcttcagattgtcgctgggtcctgtgacactggaccctctgcttttatc
ttcactgatgatcgaaggtatctcttcaacacgggcgaaggcatccagcgcttctgtatg
gagcacaagattcgcctgaagcaagtcacggacatcttcttcacaaagagcagctgggag
tgcatcggcggccttccaggcatgctgctgacaatgcaggacatgtaccaggtgtcgcat
ccagtggccctgcacgccccaccgcacctcagcaccatgcttgagggcaccaagacgttt
atgcagcaccgctccagcctctaccgtgagtttcgcgagtacacagaccccgtctcggag
tttgatgacgggcgcttgcgcatgaaaatcttcacgattcacgcgcgcgaccaaacccca
gcgctgcacccgcacgtcatctctgcgctcaagcagcagaagtacatggagcaagcagcg
ccgcccgtcagccagaacattggcgccgagtttgaccaccacgccacgcacgaaccgcac
accttgcccgccaagaaggttcgtctccaacccaaacaagaccaatcaccaggtcaacag
cagcagcagcagcagcagcagcagcagccgtcagctgggaacggccacgacgcagcacgg
cagcgcacgccatcgcccatttcgtctcgattggagtctgcatcgccaccaccacacccg
gcaccacagctcacgctcgtgccgccaacagcagaggagacgctcgccgctgcggagagc
acgcgcgacacggcgctggcgtacgtgggctcgctcgtcaatccgcggccaggcaagttc
aacgtgcaaaaggccaaggcagcaggcgtgccaaaggggccactctgggggcagcttggc
aagggcaacgaagtgacgctggatgacggacgtgtggtgaagcctgaagatgtgcttgat
cccgtggacccgctcccccattttgccattgtccacatcccaacacgcgcggcactggag
gccaccattgcccgcagcgagctgtttgatgccttccgcgcaatgcccagcagcatgcca
aaggtggtgcatttcacctcgcaggcgctggcgcagacggacgcatatgcgcaactcttg
caacagtttggccccaacgtcacccacgtctttgttgacccgcagcacaacccgcacgcc
accaccatctcctcaacaaagctgcagtacatgctacaaacgattgggccgacaccgttt
gccatggcgcctgttccatccaccgtcccggaactgaccgtgccacacgcgctgccagac
aactgcagcgtggtgtctgcacagccgctgtatcgcgtgtttctctccaagcggcgggac
ggcctcctcacggacgccacaacctgcctacccatcgtctcccctgaagagtgcagagaa
acagtcatggcgctgcctgacatgcaacggctcctgccacaacaaaatgaacatgcacaa
gcaccaccaccaacaacagcaccaccaacgacaacaacacccgcaaaagcaccaccaaca
acgacaacaacagcaacagcaacagcgtccgggacaggtggtgattcactggctgcactc
cgccctgatgagcgtgtgctgcatttcatgggcactggatccgcggtcccgtcgcaattg
cgtaatgtcacgggcatgctgctgacgcgcggaatttgggtggacagcgacggcgccacg
accgtgaacaaggacgtggctgcatcgatgctgctggactgcggcgaaggctcgctcagc
caactccagcgcaagtttggtgcagagcacatgcccgcggtgctgcggtcgcttcgcctc
gtgcacatctcgcacatgcacgcagaccaccaccttgggctcacgcgtgtgcttgcgcgg
cgccgtgaagcgtttgctgctgttggcgtggacgacccgccgcccgtcgttgttgtcgcc
ccgcattttctgtggctgttcatgcgctacacggcccacctctcctgcgccaccgccgtg
ttcctcgatgcacgttggacacgttttgcgcactggcagctgccgcgcttcgtgccgccc
cacgtcaaggacgcatatgcacgggcgatggcgggcatgggcctgcgtgcgctcgcaaca
cctgcagtcaagcactgcttcgctgcctacgggcttgtgcttgactttgacgacgggtac
cggtttgcgtggtccggggacacgcgcccgtgcaagtcgatggttggcgcggggaaaggg
gcggacgtgcttgtgcacgaggcgacgtttgaggacgggctggaggaccaggcggtgcag
aagaaccacagcacaaccagcgacgccgtgaccgtggcgcagcagatgggcgccaagatg
ctcatcctcacgcatttttcgcagcggtatccgcagatccctgttctcgacgccaagagc
cgcgagcacacggcgtttgggtttgacctgatgagcgtggtgctgcggagggcgaaggag
ctgacagccatgacgccggctatcgaccacatgttcacggcgctaaagcccgaagaggag
gaggaggagggtgatgatgatggcgatatcgaaacgattggtggtgcggacggcaatgcc
aaagggaaaggggagaagaaggggaaggacaaggtgaaggcgaaggtgaagggcaatggg
aaaggtggaggtgtgaaggtggatgatgttgctcgtggaaggaagcagcagaagcagaag
cagccgaaggagagcaagcagacagctgcggtgaaggaggtcaggactgatgctgaccaa
caacaagcatcgtag
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