KEGG   Salpingoeca rosetta: PTSG_02413
Entry
PTSG_02413        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_02413
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     PTSG_02413
SSDB
Motif
Pfam: Plus-3
Other DBs
NCBI-GeneID: 16077496
NCBI-ProteinID: XP_004996904
UniProt: F2U248
LinkDB
Position
Unknown
AA seq 645 aa
MSSSSDSGSDLDVADAEMMLMGTSRTKKKQPASQRRKAPAKRAKVIVESDEEDEDSDDDV
FTHKYNEDLYVDEEDRKYLEGLTELERELELNRRNEEREKAKQRWEMEREIKRKAKRQQA
AARRKSPRRTRAQPTVASEDEEEDLDETQGAGYVDEEEAESDYEAEIGGNQMVTALEEEE
EIEPQKDETPATLEQLESIRATRTKLLEWCHEAHFPETAAGMMVRINLGESQPGVSTYRL
GQIVRVEEKRLYELRDGRERTKTRFYVLVQHGRSRRPFRMSFVSNGPILQKEFMKWQAAI
EKDNMAFPTADDVSRKRAELEALKTRVRTGEDILYTIESKRKCECATTNLAREIDGLRLE
MHRVQASKEEKEQKLSERRAALRQEENYDDDDVAEDEDEQATALRDEIQALTRRETDIVD
TIDRLERKKQSEAERRRANTFDTNKLNERNIRAEKLQRKLLSERTRTRDADDVFQRRRAF
SKKGRNLNATSNAKGKDSQDKDKIEGGADSSSAASQAAAEGMTGTGTDSDANAGGQGAQD
GKQEGASATTATATAAPAVADDATKKSANVTDLHNFQLEGVELPDIDVSADLMAVPSLVT
PSMPAPVSASLASSSSSSSTAASKGKKSGRRGLNLKAYKKKHGLV
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcgtctgactccgggtccgacttggacgttgcggatgcggagatgatgctg
atgggaacatcgagaaccaagaagaagcagccagcctcgcaacggcgcaaggcacctgcg
aaacgcgccaaagtcatcgtcgaaagcgacgaggaagatgaagattccgacgatgatgtg
ttcacacacaagtacaacgaagacttgtatgtcgatgaggaggacagaaagtacctggaa
ggcctgaccgagctcgagcgcgaactggaactcaaccgtcgtaatgaagagcgcgaaaag
gcgaagcaacgttgggagatggagcgggaaatcaagcgcaaggcgaagcgacagcaggcg
gcggctcggcgcaaatcgccccggcgaacacgcgcccagcccacagtggccagcgaggac
gaagaggaagacctggacgagacgcagggtgcaggctacgtcgacgaagaggaggctgag
tctgactacgaggctgaaattggcgggaaccagatggtgacggcgctggaggaagaggaa
gagattgaaccgcagaaagacgagaccccggccacgctggagcagctcgagtccatccgc
gcaacccgcacgaagcttcttgaatggtgccacgaagcgcactttcccgagacggctgcg
ggcatgatggttcgcatcaaccttggggaatcacagccaggcgtgtccacgtatcgtctg
gggcaaattgttcgcgtggaagaaaagcggctgtatgagctgcgtgacggccgcgagcgc
accaagacgcgtttctacgtgctcgtgcagcacggccgctcccgccgcccgtttcgcatg
tcgtttgtctcaaacggaccaatcctccagaaagagtttatgaagtggcaggcggcgatt
gagaaggacaacatggcgtttccgactgctgatgacgtctcccgtaaacgtgctgagctt
gaggcgttgaagacgcgcgtgcgcactggcgaagacattctgtacaccattgagtcgaag
cgcaagtgcgagtgcgccaccaccaacctcgcgcgtgagattgacgggctgaggcttgag
atgcaccgggtgcaggcgtccaaggaggagaaggagcagaagttgtctgagcggcgggcg
gcgctgcggcaggaggaaaactatgacgacgatgacgtggcggaggacgaggacgagcag
gcaacggcgctcagggacgagattcaggcactcacgcgccgcgagacagacattgtcgac
accatcgaccgtctcgagaggaagaagcagtccgaggcagagcggcgccgggccaacacg
tttgacacgaacaagctcaacgaacgcaacattcgggcagagaagctgcagcgcaaattg
ctgagcgagcgcacccgcacgcgcgatgccgatgatgtgtttcagcgtcgccgcgcgttc
tcgaagaagggccgcaacctcaatgccaccagcaacgccaagggcaaggatagtcaggac
aaggacaagatagagggtggtgccgacagcagcagcgcagcgtcgcaagcggccgcagag
ggcatgacgggcacgggaaccgatagcgacgccaacgcgggtggtcagggtgcacaggac
gggaagcaagagggtgcctctgcaacaacagcgacagcaacagcggcaccagccgtcgcg
gacgatgcgaccaagaagtcagccaacgtcacggacttgcacaacttccagctggaaggg
gttgagctgccagatattgatgtgagtgcagacctcatggctgttccgtcgctggtgacg
ccgtccatgcctgcgcccgtgtcggcgtctttggcatcatcatcatcgtcgtcgtcgaca
gcagcgtccaagggtaagaagtccggaaggagaggcctcaacctcaaggcatacaagaag
aagcatggccttgtttga

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