Salpingoeca rosetta: PTSG_02413
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Entry
PTSG_02413 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K15178
RNA polymerase-associated protein RTF1
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_02413
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PTSG_02413
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
16077496
NCBI-ProteinID:
XP_004996904
UniProt:
F2U248
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MSSSSDSGSDLDVADAEMMLMGTSRTKKKQPASQRRKAPAKRAKVIVESDEEDEDSDDDV
FTHKYNEDLYVDEEDRKYLEGLTELERELELNRRNEEREKAKQRWEMEREIKRKAKRQQA
AARRKSPRRTRAQPTVASEDEEEDLDETQGAGYVDEEEAESDYEAEIGGNQMVTALEEEE
EIEPQKDETPATLEQLESIRATRTKLLEWCHEAHFPETAAGMMVRINLGESQPGVSTYRL
GQIVRVEEKRLYELRDGRERTKTRFYVLVQHGRSRRPFRMSFVSNGPILQKEFMKWQAAI
EKDNMAFPTADDVSRKRAELEALKTRVRTGEDILYTIESKRKCECATTNLAREIDGLRLE
MHRVQASKEEKEQKLSERRAALRQEENYDDDDVAEDEDEQATALRDEIQALTRRETDIVD
TIDRLERKKQSEAERRRANTFDTNKLNERNIRAEKLQRKLLSERTRTRDADDVFQRRRAF
SKKGRNLNATSNAKGKDSQDKDKIEGGADSSSAASQAAAEGMTGTGTDSDANAGGQGAQD
GKQEGASATTATATAAPAVADDATKKSANVTDLHNFQLEGVELPDIDVSADLMAVPSLVT
PSMPAPVSASLASSSSSSSTAASKGKKSGRRGLNLKAYKKKHGLV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtctgactccgggtccgacttggacgttgcggatgcggagatgatgctg
atgggaacatcgagaaccaagaagaagcagccagcctcgcaacggcgcaaggcacctgcg
aaacgcgccaaagtcatcgtcgaaagcgacgaggaagatgaagattccgacgatgatgtg
ttcacacacaagtacaacgaagacttgtatgtcgatgaggaggacagaaagtacctggaa
ggcctgaccgagctcgagcgcgaactggaactcaaccgtcgtaatgaagagcgcgaaaag
gcgaagcaacgttgggagatggagcgggaaatcaagcgcaaggcgaagcgacagcaggcg
gcggctcggcgcaaatcgccccggcgaacacgcgcccagcccacagtggccagcgaggac
gaagaggaagacctggacgagacgcagggtgcaggctacgtcgacgaagaggaggctgag
tctgactacgaggctgaaattggcgggaaccagatggtgacggcgctggaggaagaggaa
gagattgaaccgcagaaagacgagaccccggccacgctggagcagctcgagtccatccgc
gcaacccgcacgaagcttcttgaatggtgccacgaagcgcactttcccgagacggctgcg
ggcatgatggttcgcatcaaccttggggaatcacagccaggcgtgtccacgtatcgtctg
gggcaaattgttcgcgtggaagaaaagcggctgtatgagctgcgtgacggccgcgagcgc
accaagacgcgtttctacgtgctcgtgcagcacggccgctcccgccgcccgtttcgcatg
tcgtttgtctcaaacggaccaatcctccagaaagagtttatgaagtggcaggcggcgatt
gagaaggacaacatggcgtttccgactgctgatgacgtctcccgtaaacgtgctgagctt
gaggcgttgaagacgcgcgtgcgcactggcgaagacattctgtacaccattgagtcgaag
cgcaagtgcgagtgcgccaccaccaacctcgcgcgtgagattgacgggctgaggcttgag
atgcaccgggtgcaggcgtccaaggaggagaaggagcagaagttgtctgagcggcgggcg
gcgctgcggcaggaggaaaactatgacgacgatgacgtggcggaggacgaggacgagcag
gcaacggcgctcagggacgagattcaggcactcacgcgccgcgagacagacattgtcgac
accatcgaccgtctcgagaggaagaagcagtccgaggcagagcggcgccgggccaacacg
tttgacacgaacaagctcaacgaacgcaacattcgggcagagaagctgcagcgcaaattg
ctgagcgagcgcacccgcacgcgcgatgccgatgatgtgtttcagcgtcgccgcgcgttc
tcgaagaagggccgcaacctcaatgccaccagcaacgccaagggcaaggatagtcaggac
aaggacaagatagagggtggtgccgacagcagcagcgcagcgtcgcaagcggccgcagag
ggcatgacgggcacgggaaccgatagcgacgccaacgcgggtggtcagggtgcacaggac
gggaagcaagagggtgcctctgcaacaacagcgacagcaacagcggcaccagccgtcgcg
gacgatgcgaccaagaagtcagccaacgtcacggacttgcacaacttccagctggaaggg
gttgagctgccagatattgatgtgagtgcagacctcatggctgttccgtcgctggtgacg
ccgtccatgcctgcgcccgtgtcggcgtctttggcatcatcatcatcgtcgtcgtcgaca
gcagcgtccaagggtaagaagtccggaaggagaggcctcaacctcaaggcatacaagaag
aagcatggccttgtttga
DBGET
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