Salpingoeca rosetta: PTSG_02477
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Entry
PTSG_02477 CDS
T04136
Name
(RefSeq) Nle1 protein
KO
K14855
ribosome assembly protein 4
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_02477
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PTSG_02477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
DSE1_N
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ASA1
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NLE
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT140_1st
Ge1_WD40
Beta-prop_NOL10_N
Beta-prop_DCAF12
eIF2A
PAC11
CFAP251_N
Beta-prop_WDR35_TULP_N
Tricorn_N
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
RMC1_N
Beta-prop_IP5PC_F
Ig_CFAP65_4th
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
16077560
NCBI-ProteinID:
XP_004996968
UniProt:
F2U2B2
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MQTQTQTGHTNTEHTHTRARDMASYKKAKLQAKLEEEKKHEHVRVLVQLVNEEGEEACQP
IELSSETTPAQLQMLCNEILEEEDPAPYAFYVKDKEITTDILDIMNTTGVSSEEVVRVVY
QPQAVFRVAGISQCSGTIPGHADNIVDVAFSPDGNSLASGSGDQTVRFWDVFTATPRKTC
KGHKSWVQCVAWSPDSQLLASGSRDCEIRVWKADRASPACAPLKGHRKYVTWLSWEPMHT
SKHKVSTRLASASADGTVKIWDVSVGRCLMTLSQHTKAVKCVVWGGEGMIYTASQDTTIK
AWRAHDGAMAWSMKGHAHWVNCLSLSTDHALRTGAFNERGVIEGDITETSLKRYNEAKGQ
KELMVSASEDHTLFLWEPSKSKKPICRMTGHQRPVNYAKFSPDGRWIVSCAFDRSARVWN
RKGEFVATLRGHVGPVFRCAWAPDSRMFITASEDSTLKLWQTKDTKLSRDLPGHEGSVFA
VDWCPTGSIVASGGADKMLKIWRR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacaaacgcaaacaggacacaccaacaccgaacacacacacacgcgcgcgaga
gacatggcgtcgtacaagaaggccaagctccaggccaagctggaggaggaaaagaaacac
gagcatgtgcgagtgctggtacagcttgtgaatgaggaaggagaggaagcatgtcagcca
atcgagttgtcatcagagaccacaccagcacagctccaaatgctgtgcaacgagatcctc
gaagaggaggatccagcgccgtatgcattctatgtcaaggacaaggagatcacaaccgac
attcttgacatcatgaacacaaccggtgtatcctctgaggaagtggttcgagtcgtgtat
cagccccaggctgtcttccgtgttgccggtatctcgcaatgcagcggcaccattccaggg
catgcggacaacattgtcgatgtggcattcagtcccgatggcaactcgctcgcgagcggc
agtggtgaccaaaccgtccgtttctgggatgtgttcacagcaacaccacgcaagacatgc
aaaggacacaagagctgggtgcagtgtgtggcatggtcgcccgattcacagctgcttgcg
tccggcagccgcgactgcgagattcgcgtgtggaaagcagatcgcgcatcgcccgcctgc
gcaccgctgaaggggcacaggaaatacgtcacatggctgtcgtgggagccaatgcacacg
tcgaaacacaaagtctccacacggcttgcatcagcgtcagcggatggcacggtgaagata
tgggatgtgtctgttgggcgatgcctgatgacgctgtcgcagcacaccaaggcagtcaag
tgcgttgtgtggggcggtgaaggcatgatctacacggcatcgcaggacaccaccatcaaa
gcgtggcgggcacacgacggagcaatggcatggtccatgaagggtcatgcgcattgggtg
aactgcctttctctcagcacagaccacgccctcaggacgggcgccttcaacgagcgtggc
gtcatcgagggcgacatcacggagacgagtctcaagcggtacaacgaagcaaaaggacag
aaggaactcatggtctccgccagcgaggaccacacgctgttcctttgggagccgagcaag
agcaagaagcccatctgccgcatgactggccaccagcgacccgtcaactacgcaaagttc
agcccagacgggcgctggatcgtcagctgtgcgtttgaccgctctgcccgcgtgtggaac
cgcaagggcgagtttgttgccacgctgcgtgggcatgtcggaccggtcttccggtgcgcg
tgggcgccagactcgcgcatgttcatcacggcaagcgaggacagcacgctcaagctgtgg
cagacgaaagacacaaagctgtcgcgagacctgcctggccacgagggctctgtgtttgct
gtggactggtgcccaactggctcgattgtggccagcggcggcgcagacaagatgctcaag
atctggcggcgctaa
DBGET
integrated database retrieval system