KEGG   Salpingoeca rosetta: PTSG_02685
Entry
PTSG_02685        CDS       T04136                                 
Name
(RefSeq) WD-40 repeat protein
Organism
sre  Salpingoeca rosetta
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_DCAF4 NPHP3_N Beta-prop_IFT140_1st Beta-prop_WDR19_1st PROPPIN Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WDR54 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_Nup120_160 DDHD VPS13_N Beta-prop_DCAF12 SpoIIP EOS1 TibC_1st MDM10
Other DBs
NCBI-GeneID: 16076768
NCBI-ProteinID: XP_004996181
UniProt: F2U304
LinkDB
Position
Unknown
AA seq 1921 aa
MFSCCGRGGTVGTISPDFGGLTPSASTVHRFGTNTSPDNGEDHNGDSHHDINGNDHDING
NDDGEDATHCNQSHQEHQTRPLMQVPSRRRTQPEAALVSARVFPVRVPPSPSAIVSTSRA
LQELEGLALCAPGGNNTCTQEAHALRTAVVDGTTRATLSNNNSNDNRALRKVFAVVAIDL
CKVAMDKVQLLRDANCRKHAEPLARQAAVIVSLATRPTHDAAAAVQPKQIPLILRALGHS
SFAAAANMLRLRLQRGLGSILLAQSVRPGDVHHSSLLNLGSLAMMPPTPPPTPGDDQQQQ
LLLRSQKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQASSAVRLPALAWL
HTLLKQARAVDAAEFWTANRFEDTVAICSLLHALEHWVDEDHFKGSDLLQHPAAGLASDP
HLHAFFATEAMRETTGVQRFLKLANQASTVAAAVIAFLKQHRHDHAPVAMPTMPAAAAAT
AATASAMALQTGPAIMAALRTMLIPVDFGPDLVRHHKGFAEGTRQWVFGAFEEWARSGGG
GVRPHERTQQRVFWVRGVHGFGKSVIAAQLIKRYGSERELGGGAAGDGRDIVVGGGGGGG
GCGGGGVKNGMGGTVGESGVEAGVRRSDGDAGSSRQQRPLIAAHFFCRHGDAARSDARRA
ISTLAYRLASQLPELRQVYKMVLQDEEQRVSFAAHADGSKGGVEEAFSVVLAEPLKAALQ
KRQQQQQRQQPQHQHETGDVFILIDALDELCDGSSREQFLRFITRLLPSLPPCVRLVVTS
RPEENVLAFLTSLNPFTIGRQNERQREDLQLFVRSTVIKQSSLRKLKPAQQEEVVKMIVD
QADGEFLAVRLIARAVDEAEGDSTKPLTVDDAQGFLGTSESFIDDTYTETLDRIQARLKE
AAGDDDGVLAALQGTLHDMLAVLVASLQPLRVDALHELCGGGRVQSKALTKRLLSALSLL
FSSSSKHDVVEPLHKTVTDFLTDKTRAGPHFVDVRGGHAILARASLRVLQERGLLTGGGD
DDSARLAVRAPVVVYALEFGHLHMAECAAAAAGVNDCSQTNTLCLQTVQAWERCFLQPRQ
RPLPWAESGHLSYRVQPSTHAATNAFARWLLLQTHTLKRTRPLMAELAQVATTSAAAATT
LTATTASAAKAVTTATAAKTVTAASAAKTVTTATTAKTVTTATTATTSHDSHDSRHGHLF
ERLSALMSHAQMLLGLFWAPAKELEQAIADFNVHVPLSSCLHASPAQRCLWRASGCVEQL
ACIPPVVLPNLRRGYHGGAHERSVHSIAFSQEGARLVSASDDQRVCVWNAQTGELVAECL
GHEGRVSAIAVFANGTRVASSSNDATVRVWDAASGQQVCQCNGHNGWVICLAASADGTRI
ASGGNDTNVLVCDAQTGKVTATCSGHTRTVWKVEFSVDGRRIASASSDTTVRVWDAVTGH
EVAQCLGHSRMVWEVAFSPCGDRLVSASRDKTVRIWDAHNGRQLSKCTGHKSNVNVLAMS
PDGTRVVSGGIDTTVRVWNMQTGAQMCECTGHTGSVDALAVSTDGRRVISGSYDTTVRVW
DINTGQQLRQLDGHMSRVLAVAASPSGTRVASGSQDTTLRVWDEASGCQVAECDRPAIPA
TAVALALDGSRIVSGRRDGRVCIYDTLSGKRVGTCTAGQESAVTSVALHWPYLVSASEDA
TVRTWDAETWEERARCVGHAAAVRAVVVNGDGTLIVSASEDATIRVWSLLDGQLLSTLHG
HDGPVISVALSVDDQVIASGGTDCTLRLWNARTGQHLQRLEAHPAPVMCVAFCAGANRLV
SGCEDGIVRVWANSDGDAITPSTAACLHNAQCLGGHEGGVTALAACGGGGGGTGEDGVYV
VSTGDDGTARVWNVLTGEQAGVCRGHDGRVSSVATRGRAKDGVCMVVTGGEGDASVRVWR
W
NT seq 5766 nt   +upstreamnt  +downstreamnt
atgttctcgtgctgtgggcggggcggcacggtgggcaccatctctcccgactttgggggc
ctcaccccgtctgcttcaaccgtgcatcgcttcggcacaaacacatcgcccgacaacggt
gaggaccacaacggcgacagccatcacgacatcaacggcaacgatcatgacatcaacggc
aacgatgatggcgaggatgccacacactgcaaccagagccaccaggaacatcaaacacgc
cctctcatgcaagtgccgtcgcgtcgccggacgcagccagaggctgcattggtgtcggca
cgcgtcttccccgtccgcgtgccgccctctccctccgccatcgtcagcacgtccagggca
ctgcaggagcttgaagggcttgcgctgtgcgcacccggtggcaacaacacatgcacgcag
gaggcgcacgccctccggaccgctgttgtggatggtacaacccgcgccaccctctccaac
aacaacagcaacgacaaccgagccctgcgcaaggtgtttgccgttgtcgcgattgacttg
tgcaaggtcgccatggacaaggtgcagctattgcgagacgccaattgcaggaaacacgca
gagcccttggcgcggcaagccgctgtcatcgtcagtctggcgacacgccccacccacgat
gccgctgctgctgtgcagcccaaacagataccgctcatcttgcgcgctctcggccactct
tcatttgcagctgccgcaaacatgctcaggttgcgcctgcagcgtggactcggttctatt
ttgctcgcccaaagtgttcgtcctggtgacgtccaccactcgtccctcctgaatctcggc
agcctcgccatgatgccgccaacacctccacccacacccggtgatgaccagcagcaacag
ctgctgctgcgatcgcagaaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcag
cagcagcagcagcagcagcaggcctcttccgcagtccgtctacctgccctggcgtggctg
cacaccctcttgaagcaggctcgtgcggttgacgctgccgagttttggactgccaacagg
ttcgaggacactgtcgcgatttgcagcctcctacatgcgctcgagcactgggtggacgag
gaccacttcaagggctcagaccttctgcaacacccggccgcgggcctggccagtgacccc
cacctgcacgccttcttcgccacagaggccatgcgggagaccacgggcgtgcagcggttc
ctcaaactggccaaccaagccagcaccgtcgccgcagccgtcatcgccttcctcaagcag
caccgccacgaccacgcccccgtggccatgcccaccatgcccgccgccgccgccgccacc
gccgccactgcaagcgcgatggcgctgcagacggggccagccatcatggcagcgctgcgc
accatgctgatacccgttgactttggcccagacctcgtcaggcaccacaaagggtttgca
gagggcacgcgccagtgggtgtttggtgcatttgaagagtgggctaggagtggtggtggt
ggtgtacggccgcacgagcggacacagcagcgcgtgttttgggtgaggggcgtgcacggc
tttggcaagtccgtcattgcagcccagctcatcaagcggtacggcagtgaaagagagctc
ggtggtggtgctgctggtgatggtcgtgatattgttgttggtggcggtggtggtggtggt
ggttgtggtggtggtggtgtgaagaatggtatgggtggcacggtgggggagagcggtgtt
gaggccggagtgaggcggagtgatggcgatgccgggtcctcgcgtcaacagcgaccgctg
attgcggcccacttcttctgcagacacggtgatgcagctcgcagcgatgcgcgcagagca
atcagcaccctcgcctaccgcctcgcatcccagttgcccgagctgagacaggtgtacaag
atggtgctgcaagatgaggagcagcgcgtctcctttgctgcacacgccgatggcagcaag
ggtggcgtggaggaggccttcagcgtcgtgctcgctgaacccctcaaggctgcactgcag
aagcgacaacagcaacagcaacgtcaacaaccacagcaccagcacgaaactggtgatgtc
ttcatcttgattgatgcgttggatgagctgtgtgacggcagcagccgggagcagtttctg
cggttcatcaccaggctgctgccatcactgccaccgtgtgtgcgtcttgtggtgacgtca
cgcccggaggagaacgtcctcgccttcttgacgagtctgaacccgttcaccatcgggagg
cagaacgagcggcagcgcgaggacctgcagctgtttgtgcgcagcaccgtcatcaagcag
agcagcctgcgcaagctgaaaccggcccagcaagaggaggtggtgaagatgattgttgac
caagcagacggcgagtttctggcggtgcggctgatcgctcgtgctgtggacgaggcagag
ggcgactcgaccaagccactcaccgtggatgatgcgcaagggttccttggcaccagcgag
agcttcattgacgacacgtacacggagacgctcgaccgcatccaagcgcgactcaaggag
gcggcgggcgatgacgacggtgtgctggccgcgctgcaaggcaccctgcatgacatgttg
gcggtgcttgtggcgtcgctgcagccgctgcgcgtggatgccctgcatgagctgtgcggt
ggtggccgggtgcagagcaaggcgctgacgaagcggctgctgagcgcgctgtcgctcctc
ttctccagcagtagcaagcatgacgtggttgagccgctgcacaagaccgtcaccgacttt
cttacggacaagacgcgggctggccctcactttgtggacgtgcggggaggccacgccatc
ctcgctcgcgcgtccctgcgtgtgctgcaggaacgaggattgctgacaggtggtggtgac
gacgacagcgctcgtctggctgtgcgagcgccggtggtggtgtatgctttggagtttgga
cacctgcacatggcggagtgtgcagcagcggcggcgggcgtgaatgattgtagccagacc
aacaccctgtgcttgcagaccgtacaggcgtgggagcgctgctttttgcaaccccgacag
aggccattgccctgggcggaatccggccatctctcttaccgggtgcagccatccacacat
gcagccacgaacgcctttgcgcgatggctcttgttgcaaacacataccctgaagcgcacg
cgcccactgatggcagaattggcgcaggtggcaactacgagtgctgctgctgccactact
ttgactgcgacgactgcttccgctgctaaggctgtgacgactgccaccgctgctaagact
gtgacggctgcttccgctgctaaaactgtgacgactgccaccactgctaagactgtgacg
actgccaccactgctaccaccagccacgacagtcacgacagtcgacatgggcacttgttt
gagcggttgtctgctctcatgagccatgcgcagatgctgctgggcttgttttgggcgcca
gcgaaggagcttgagcaggcgattgcagacttcaatgtacacgtgccgttgtcgtcgtgc
ctgcatgcatcgccagcgcagcggtgtctgtggagggcgagcggctgtgtggagcagctc
gcctgcattccgcccgttgtgctcccaaacctccgtcgcgggtatcacggtggggcgcat
gagcgctcagtgcacagcatcgccttcagccaggagggagcgcggctggtgtctgccagt
gatgaccagcgcgtgtgcgtctggaacgcacagacgggggagcttgttgccgagtgcctt
ggccacgaggggcgcgtgtctgcaattgcggtgtttgcgaatgggacgcgtgtcgcctcc
tcgagcaacgacgccacggtgcgcgtgtgggatgcggccagcgggcagcaggtgtgccag
tgcaacggccacaacggatgggtcatctgcctcgccgccagcgcagacggcacgcgcatt
gcctccggcggcaacgacacgaacgtgctcgtgtgcgacgcgcagacgggcaaggtcacg
gccacgtgcagcgggcacacgcgcaccgtgtggaaggtcgagtttagtgtggacggcagg
cgcatcgcctcggcttccagcgacaccactgtgcgggtgtgggacgcggtgacggggcac
gaggttgcgcagtgccttggtcactcgcgcatggtgtgggaggtggcgttcagcccttgc
ggtgaccggctggtttctgcgagtcgcgacaagacagtacgcatctgggacgcccacaac
gggcgccagctttccaagtgcacaggccacaagagcaacgtcaacgtcctggccatgagc
cccgacggcacgcgcgtcgtgtctggcggtatcgacaccactgttcgcgtgtggaacatg
cagacgggtgcgcagatgtgtgagtgcaccggccacacgggcagcgttgatgccttggcc
gtcagcacggatggcaggcgcgtcatctcaggcagctacgacaccaccgttcgcgtgtgg
gacatcaacacgggccagcagcttcgccaactcgacgggcacatgtcgcgggtgctcgct
gtcgctgccagcccctctggtacacgtgttgcgtccggcagccaagacacgacgctgcgc
gtgtgggacgaggcaagcggttgccaagttgcagagtgcgaccgccccgccattcccgcc
acagccgtcgcccttgcccttgatggctcgcgcatcgtgtccggcagaagggatggacgc
gtgtgcatctacgacacgctgagcgggaaacgggtgggcacatgcactgctggtcaggag
agcgctgtgacaagcgtggcgctgcactggccgtaccttgtctctgccagcgaggacgca
accgttcgcacatgggatgcagagacgtgggaagaacgcgcacgctgcgtgggccacgcc
gctgccgtgcgtgctgtcgttgtgaacggcgatggcaccctcattgtctctgcaagcgaa
gacgccaccattcgcgtgtggtccctgcttgacgggcagctgctctccacactacatggc
catgatggccccgtcatttctgttgcgctgagcgtcgatgaccaggtcatcgcgtcaggt
ggcacagactgcaccctacgcctctggaacgcgcgcaccggccagcacctgcagcggctc
gaggcccacccggcgccagtcatgtgcgtggcgttctgcgcaggtgcgaaccggcttgtc
tccggctgcgaggacgggattgttcgcgtgtgggcgaattcagacggcgatgccattaca
ccaagcaccgcagcgtgcttgcacaacgcgcagtgcctcggcggccacgaaggcggcgtc
accgctctcgccgcttgtggtggtggtggtggtggtactggtgaggatggggtgtatgtt
gtgagcacgggggacgatggcactgctcgggtgtggaacgtgttgacaggcgagcaggct
ggcgtgtgccggggacacgatgggcgagtgtcatcggttgccacgcgagggcgagccaag
gacggcgtgtgcatggtggtgaccggtggcgagggggacgccagcgtgcgtgtgtggagg
tggtaa

DBGET integrated database retrieval system