Salpingoeca rosetta: PTSG_02685
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Entry
PTSG_02685 CDS
T04136
Name
(RefSeq) WD-40 repeat protein
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_DCAF4
NPHP3_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WDR54
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_Nup120_160
DDHD
VPS13_N
Beta-prop_DCAF12
SpoIIP
EOS1
TibC_1st
MDM10
Motif
Other DBs
NCBI-GeneID:
16076768
NCBI-ProteinID:
XP_004996181
UniProt:
F2U304
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MFSCCGRGGTVGTISPDFGGLTPSASTVHRFGTNTSPDNGEDHNGDSHHDINGNDHDING
NDDGEDATHCNQSHQEHQTRPLMQVPSRRRTQPEAALVSARVFPVRVPPSPSAIVSTSRA
LQELEGLALCAPGGNNTCTQEAHALRTAVVDGTTRATLSNNNSNDNRALRKVFAVVAIDL
CKVAMDKVQLLRDANCRKHAEPLARQAAVIVSLATRPTHDAAAAVQPKQIPLILRALGHS
SFAAAANMLRLRLQRGLGSILLAQSVRPGDVHHSSLLNLGSLAMMPPTPPPTPGDDQQQQ
LLLRSQKQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQASSAVRLPALAWL
HTLLKQARAVDAAEFWTANRFEDTVAICSLLHALEHWVDEDHFKGSDLLQHPAAGLASDP
HLHAFFATEAMRETTGVQRFLKLANQASTVAAAVIAFLKQHRHDHAPVAMPTMPAAAAAT
AATASAMALQTGPAIMAALRTMLIPVDFGPDLVRHHKGFAEGTRQWVFGAFEEWARSGGG
GVRPHERTQQRVFWVRGVHGFGKSVIAAQLIKRYGSERELGGGAAGDGRDIVVGGGGGGG
GCGGGGVKNGMGGTVGESGVEAGVRRSDGDAGSSRQQRPLIAAHFFCRHGDAARSDARRA
ISTLAYRLASQLPELRQVYKMVLQDEEQRVSFAAHADGSKGGVEEAFSVVLAEPLKAALQ
KRQQQQQRQQPQHQHETGDVFILIDALDELCDGSSREQFLRFITRLLPSLPPCVRLVVTS
RPEENVLAFLTSLNPFTIGRQNERQREDLQLFVRSTVIKQSSLRKLKPAQQEEVVKMIVD
QADGEFLAVRLIARAVDEAEGDSTKPLTVDDAQGFLGTSESFIDDTYTETLDRIQARLKE
AAGDDDGVLAALQGTLHDMLAVLVASLQPLRVDALHELCGGGRVQSKALTKRLLSALSLL
FSSSSKHDVVEPLHKTVTDFLTDKTRAGPHFVDVRGGHAILARASLRVLQERGLLTGGGD
DDSARLAVRAPVVVYALEFGHLHMAECAAAAAGVNDCSQTNTLCLQTVQAWERCFLQPRQ
RPLPWAESGHLSYRVQPSTHAATNAFARWLLLQTHTLKRTRPLMAELAQVATTSAAAATT
LTATTASAAKAVTTATAAKTVTAASAAKTVTTATTAKTVTTATTATTSHDSHDSRHGHLF
ERLSALMSHAQMLLGLFWAPAKELEQAIADFNVHVPLSSCLHASPAQRCLWRASGCVEQL
ACIPPVVLPNLRRGYHGGAHERSVHSIAFSQEGARLVSASDDQRVCVWNAQTGELVAECL
GHEGRVSAIAVFANGTRVASSSNDATVRVWDAASGQQVCQCNGHNGWVICLAASADGTRI
ASGGNDTNVLVCDAQTGKVTATCSGHTRTVWKVEFSVDGRRIASASSDTTVRVWDAVTGH
EVAQCLGHSRMVWEVAFSPCGDRLVSASRDKTVRIWDAHNGRQLSKCTGHKSNVNVLAMS
PDGTRVVSGGIDTTVRVWNMQTGAQMCECTGHTGSVDALAVSTDGRRVISGSYDTTVRVW
DINTGQQLRQLDGHMSRVLAVAASPSGTRVASGSQDTTLRVWDEASGCQVAECDRPAIPA
TAVALALDGSRIVSGRRDGRVCIYDTLSGKRVGTCTAGQESAVTSVALHWPYLVSASEDA
TVRTWDAETWEERARCVGHAAAVRAVVVNGDGTLIVSASEDATIRVWSLLDGQLLSTLHG
HDGPVISVALSVDDQVIASGGTDCTLRLWNARTGQHLQRLEAHPAPVMCVAFCAGANRLV
SGCEDGIVRVWANSDGDAITPSTAACLHNAQCLGGHEGGVTALAACGGGGGGTGEDGVYV
VSTGDDGTARVWNVLTGEQAGVCRGHDGRVSSVATRGRAKDGVCMVVTGGEGDASVRVWR
W
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgtgctgtgggcggggcggcacggtgggcaccatctctcccgactttgggggc
ctcaccccgtctgcttcaaccgtgcatcgcttcggcacaaacacatcgcccgacaacggt
gaggaccacaacggcgacagccatcacgacatcaacggcaacgatcatgacatcaacggc
aacgatgatggcgaggatgccacacactgcaaccagagccaccaggaacatcaaacacgc
cctctcatgcaagtgccgtcgcgtcgccggacgcagccagaggctgcattggtgtcggca
cgcgtcttccccgtccgcgtgccgccctctccctccgccatcgtcagcacgtccagggca
ctgcaggagcttgaagggcttgcgctgtgcgcacccggtggcaacaacacatgcacgcag
gaggcgcacgccctccggaccgctgttgtggatggtacaacccgcgccaccctctccaac
aacaacagcaacgacaaccgagccctgcgcaaggtgtttgccgttgtcgcgattgacttg
tgcaaggtcgccatggacaaggtgcagctattgcgagacgccaattgcaggaaacacgca
gagcccttggcgcggcaagccgctgtcatcgtcagtctggcgacacgccccacccacgat
gccgctgctgctgtgcagcccaaacagataccgctcatcttgcgcgctctcggccactct
tcatttgcagctgccgcaaacatgctcaggttgcgcctgcagcgtggactcggttctatt
ttgctcgcccaaagtgttcgtcctggtgacgtccaccactcgtccctcctgaatctcggc
agcctcgccatgatgccgccaacacctccacccacacccggtgatgaccagcagcaacag
ctgctgctgcgatcgcagaaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcag
cagcagcagcagcagcagcaggcctcttccgcagtccgtctacctgccctggcgtggctg
cacaccctcttgaagcaggctcgtgcggttgacgctgccgagttttggactgccaacagg
ttcgaggacactgtcgcgatttgcagcctcctacatgcgctcgagcactgggtggacgag
gaccacttcaagggctcagaccttctgcaacacccggccgcgggcctggccagtgacccc
cacctgcacgccttcttcgccacagaggccatgcgggagaccacgggcgtgcagcggttc
ctcaaactggccaaccaagccagcaccgtcgccgcagccgtcatcgccttcctcaagcag
caccgccacgaccacgcccccgtggccatgcccaccatgcccgccgccgccgccgccacc
gccgccactgcaagcgcgatggcgctgcagacggggccagccatcatggcagcgctgcgc
accatgctgatacccgttgactttggcccagacctcgtcaggcaccacaaagggtttgca
gagggcacgcgccagtgggtgtttggtgcatttgaagagtgggctaggagtggtggtggt
ggtgtacggccgcacgagcggacacagcagcgcgtgttttgggtgaggggcgtgcacggc
tttggcaagtccgtcattgcagcccagctcatcaagcggtacggcagtgaaagagagctc
ggtggtggtgctgctggtgatggtcgtgatattgttgttggtggcggtggtggtggtggt
ggttgtggtggtggtggtgtgaagaatggtatgggtggcacggtgggggagagcggtgtt
gaggccggagtgaggcggagtgatggcgatgccgggtcctcgcgtcaacagcgaccgctg
attgcggcccacttcttctgcagacacggtgatgcagctcgcagcgatgcgcgcagagca
atcagcaccctcgcctaccgcctcgcatcccagttgcccgagctgagacaggtgtacaag
atggtgctgcaagatgaggagcagcgcgtctcctttgctgcacacgccgatggcagcaag
ggtggcgtggaggaggccttcagcgtcgtgctcgctgaacccctcaaggctgcactgcag
aagcgacaacagcaacagcaacgtcaacaaccacagcaccagcacgaaactggtgatgtc
ttcatcttgattgatgcgttggatgagctgtgtgacggcagcagccgggagcagtttctg
cggttcatcaccaggctgctgccatcactgccaccgtgtgtgcgtcttgtggtgacgtca
cgcccggaggagaacgtcctcgccttcttgacgagtctgaacccgttcaccatcgggagg
cagaacgagcggcagcgcgaggacctgcagctgtttgtgcgcagcaccgtcatcaagcag
agcagcctgcgcaagctgaaaccggcccagcaagaggaggtggtgaagatgattgttgac
caagcagacggcgagtttctggcggtgcggctgatcgctcgtgctgtggacgaggcagag
ggcgactcgaccaagccactcaccgtggatgatgcgcaagggttccttggcaccagcgag
agcttcattgacgacacgtacacggagacgctcgaccgcatccaagcgcgactcaaggag
gcggcgggcgatgacgacggtgtgctggccgcgctgcaaggcaccctgcatgacatgttg
gcggtgcttgtggcgtcgctgcagccgctgcgcgtggatgccctgcatgagctgtgcggt
ggtggccgggtgcagagcaaggcgctgacgaagcggctgctgagcgcgctgtcgctcctc
ttctccagcagtagcaagcatgacgtggttgagccgctgcacaagaccgtcaccgacttt
cttacggacaagacgcgggctggccctcactttgtggacgtgcggggaggccacgccatc
ctcgctcgcgcgtccctgcgtgtgctgcaggaacgaggattgctgacaggtggtggtgac
gacgacagcgctcgtctggctgtgcgagcgccggtggtggtgtatgctttggagtttgga
cacctgcacatggcggagtgtgcagcagcggcggcgggcgtgaatgattgtagccagacc
aacaccctgtgcttgcagaccgtacaggcgtgggagcgctgctttttgcaaccccgacag
aggccattgccctgggcggaatccggccatctctcttaccgggtgcagccatccacacat
gcagccacgaacgcctttgcgcgatggctcttgttgcaaacacataccctgaagcgcacg
cgcccactgatggcagaattggcgcaggtggcaactacgagtgctgctgctgccactact
ttgactgcgacgactgcttccgctgctaaggctgtgacgactgccaccgctgctaagact
gtgacggctgcttccgctgctaaaactgtgacgactgccaccactgctaagactgtgacg
actgccaccactgctaccaccagccacgacagtcacgacagtcgacatgggcacttgttt
gagcggttgtctgctctcatgagccatgcgcagatgctgctgggcttgttttgggcgcca
gcgaaggagcttgagcaggcgattgcagacttcaatgtacacgtgccgttgtcgtcgtgc
ctgcatgcatcgccagcgcagcggtgtctgtggagggcgagcggctgtgtggagcagctc
gcctgcattccgcccgttgtgctcccaaacctccgtcgcgggtatcacggtggggcgcat
gagcgctcagtgcacagcatcgccttcagccaggagggagcgcggctggtgtctgccagt
gatgaccagcgcgtgtgcgtctggaacgcacagacgggggagcttgttgccgagtgcctt
ggccacgaggggcgcgtgtctgcaattgcggtgtttgcgaatgggacgcgtgtcgcctcc
tcgagcaacgacgccacggtgcgcgtgtgggatgcggccagcgggcagcaggtgtgccag
tgcaacggccacaacggatgggtcatctgcctcgccgccagcgcagacggcacgcgcatt
gcctccggcggcaacgacacgaacgtgctcgtgtgcgacgcgcagacgggcaaggtcacg
gccacgtgcagcgggcacacgcgcaccgtgtggaaggtcgagtttagtgtggacggcagg
cgcatcgcctcggcttccagcgacaccactgtgcgggtgtgggacgcggtgacggggcac
gaggttgcgcagtgccttggtcactcgcgcatggtgtgggaggtggcgttcagcccttgc
ggtgaccggctggtttctgcgagtcgcgacaagacagtacgcatctgggacgcccacaac
gggcgccagctttccaagtgcacaggccacaagagcaacgtcaacgtcctggccatgagc
cccgacggcacgcgcgtcgtgtctggcggtatcgacaccactgttcgcgtgtggaacatg
cagacgggtgcgcagatgtgtgagtgcaccggccacacgggcagcgttgatgccttggcc
gtcagcacggatggcaggcgcgtcatctcaggcagctacgacaccaccgttcgcgtgtgg
gacatcaacacgggccagcagcttcgccaactcgacgggcacatgtcgcgggtgctcgct
gtcgctgccagcccctctggtacacgtgttgcgtccggcagccaagacacgacgctgcgc
gtgtgggacgaggcaagcggttgccaagttgcagagtgcgaccgccccgccattcccgcc
acagccgtcgcccttgcccttgatggctcgcgcatcgtgtccggcagaagggatggacgc
gtgtgcatctacgacacgctgagcgggaaacgggtgggcacatgcactgctggtcaggag
agcgctgtgacaagcgtggcgctgcactggccgtaccttgtctctgccagcgaggacgca
accgttcgcacatgggatgcagagacgtgggaagaacgcgcacgctgcgtgggccacgcc
gctgccgtgcgtgctgtcgttgtgaacggcgatggcaccctcattgtctctgcaagcgaa
gacgccaccattcgcgtgtggtccctgcttgacgggcagctgctctccacactacatggc
catgatggccccgtcatttctgttgcgctgagcgtcgatgaccaggtcatcgcgtcaggt
ggcacagactgcaccctacgcctctggaacgcgcgcaccggccagcacctgcagcggctc
gaggcccacccggcgccagtcatgtgcgtggcgttctgcgcaggtgcgaaccggcttgtc
tccggctgcgaggacgggattgttcgcgtgtgggcgaattcagacggcgatgccattaca
ccaagcaccgcagcgtgcttgcacaacgcgcagtgcctcggcggccacgaaggcggcgtc
accgctctcgccgcttgtggtggtggtggtggtggtactggtgaggatggggtgtatgtt
gtgagcacgggggacgatggcactgctcgggtgtggaacgtgttgacaggcgagcaggct
ggcgtgtgccggggacacgatgggcgagtgtcatcggttgccacgcgagggcgagccaag
gacggcgtgtgcatggtggtgaccggtggcgagggggacgccagcgtgcgtgtgtggagg
tggtaa
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