KEGG   Salpingoeca rosetta: PTSG_03016
Entry
PTSG_03016        CDS       T04136                                 
Name
(RefSeq) excision repair cross-complementing rodent repair deficiency
  KO
K10849  DNA excision repair protein ERCC-1
Organism
sre  Salpingoeca rosetta
Pathway
sre03420  Nucleotide excision repair
sre03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PTSG_03016
   03460 Fanconi anemia pathway
    PTSG_03016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_03016
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     PTSG_03016
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2
Other DBs
NCBI-GeneID: 16077123
NCBI-ProteinID: XP_004996535
UniProt: F2U408
LinkDB
Position
Unknown
AA seq 548 aa
MGGKRLLRLREPPKTERTNLFQQQGGGSRGAGESSSTKQQQQEERPQQQQQQQQQQQQQQ
QQQQQQQQQQPQQQQQQQQQQQQPQQQQQLKQQQQQQQGQSHDDGALAPKRAKDTTTHGK
SGDTARWSPRRHTRKGGNSAGADAYDDDDDDDGVADEVMLRVLDEVDMSGVTVEMGSDGV
MRISENLDDSGPRPATTTATGAATPSSTAQDRQPPDLQSIVNAIPPTTAESISRLAATQS
GTTAGVGVTKTGQGNAGAPAASSVSETAPATTTTTATATAASTTTAATATTASTTTTTPT
ATTATTASTSSASSATAAALNEESERTRQLLNGLAKQAVGPNFVRVDVRQKGNPVLQHIR
NVPWQYCEQKADFVMGKRTCGLFLSLRYHLLHPEYIHGRIREVGRLYQVRVLLVLVDVRD
SQPVLMDLTKLCMVHNYTLMLGWSNKEVGRYVETYKAYENKSADALQQTTAPDYLSQVVA
CLTSVRSVNKTDAITLLSAFGSVRGIATASEDDIRLCPGFGDKKVQKLKSVLTQPFVNPN
RARPSRFK
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgggcggcaagcgcctgctgcgattgcgcgaaccgccaaagaccgagcgcaccaacctc
ttccaacagcagggtggtggcagccgtggtgctggtgaatcatcaagcacgaagcagcag
cagcaggaagaacggccacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaaccacaacaacaacaacaacaacaacaacaa
caacaacaaccacaacaacaacaacaacttaaacaacaacaacaacaacaacaaggacag
agccatgacgatggtgcattggcacccaagagagcaaaggacacaacgacgcatggcaaa
tcgggcgacacagcacgctggtcaccgagaagacacacacgcaagggtgggaacagcgct
ggcgctgatgcttatgacgacgacgacgatgatgacggtgtcgctgatgaagtcatgctg
cgcgtgctggatgaagtggacatgtccggtgtcaccgttgagatgggcagtgacggtgtg
atgcgcatctcggagaacttggacgacagcggtccacgtccagccaccaccaccgccacc
ggcgctgccacaccctcctccaccgcacaagacaggcagccaccggacttgcagagtatc
gtgaatgccatcccgccaacgacggcagagtccatctcgcggttggcagccacgcaatct
ggcacaacagcaggggtaggagtgaccaagacgggccagggcaatgcgggtgcacctgct
gcatcttcggtttccgagacggcaccagcaaccacaaccaccacagcaacagcaacagca
gcatcaacaacgacagcagcaacggcaacgacagcatcaacgacaaccacaacaccaaca
gccaccacggcaacgacagcatcaacatcgtcagcatcatcagcaacagcggcggccttg
aacgaggagagcgagcggacacggcagctgctgaatggtctggccaagcaggctgtcggc
ccaaactttgtgcgcgtggacgttcggcagaaaggaaaccccgtcctccaacacatccgc
aacgtgccttggcagtactgcgagcagaaggcggactttgtcatgggcaagcgcacgtgc
gggctgttcctgagtctacggtaccacttgctccacccagagtacatacacggccgcatc
agggaggttggccgcctgtaccaggtgcgcgtgctgctggtgctcgtggacgtgcgtgac
agccagcctgtgctgatggacctgacaaagctgtgcatggtgcacaactacacgctgatg
cttggctggtccaacaaggaagtggggcggtacgtcgaaacgtacaaggcgtacgagaac
aagtctgcagatgcgctgcagcagaccacggcaccagactacctgtcgcaggtcgtggcg
tgcctcacgtctgtgcgctccgtcaacaaaacagacgccatcacgctgctgtctgcgttt
gggagcgtgcgtggcattgcgacggcgagcgaggacgatattcgtctctgtcccggtttt
ggcgacaagaaggtgcagaagctcaagtctgtcttgacgcagccgttcgtcaacccaaac
agagcacgcccctctcgcttcaagtga

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