Salpingoeca rosetta: PTSG_03403
Help
Entry
PTSG_03403 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14787
multiple RNA-binding domain-containing protein 1
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_03403
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
90S particles
Other 90S particles
PTSG_03403
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
RRM_occluded
RRM_ACIN1
RRM_PARP14_3
RRM_5
RRM_3
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
16076575
NCBI-ProteinID:
XP_004995988
UniProt:
F2U536
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MSSSRIIIKGLPKKFNESRLRTIFGEHGDITQILYLPKRRIAYVGYSEEKMAEGAVEYRN
ETYIDTDQIKVSLAFGVGDERIPRPWSQYSKGSSANAALQKKREMVLRQKKGKKAQEEKQ
QKQEVKEANASKTLATLEKEQDMLKKLYDVEANPQLNPELHEYMQVMVPKNKRLVWANDG
GNTGSRSRQGQRAAAGGGGGGDESVPIADRDDGGDGDDAEKQGKVKATLQSVPSKRRGGE
GVTYVRQHLQFEDSDDDDTDDEEYQTAPGVAKKDSSDEASSDDDDDDDDDDDAGDKDEKD
EDEDMSDSEWLKSKIKSKKKEDNEGGDDDNGSDDGSSGSDSSDGEEGSDNDDAQPSKSKK
KNKKKKGSESGKAQLFSDDSDEEDEASEQGDSIIVFTAKLQGLPFRCTEQQVREFFSPLS
VVDIRFLLDRRKRGKGVAFVDFATKRDYKAALKKHRQTLGPRFVEVLPSKTRKLPALKPT
EGREAKVYPAPLGEDDKGLDETGRIFVRNLAYVCTEDDIRALFEKFGPLSEVHMPLDTQT
KKPKGIAFVTFLHPENAVKAFTQLDASVFKGRLLHLLPARTRDSDSGIVNVDTTNYKEKK
AAELKSKRENSYNWNTLFLRQDAVADSMAAELGVSKGELLNAKSDSGLAVRLAMGETRII
QDNKQFLRQHGVYLDAFDTRVTGRSKTVILVKNLPFNSTEADLRPMFEKHGAVDKFVFPP
SRTMALVSFIEPSEARAAFRGLAYRKYKGEMLYLEWAPENVFAVPEEEEEVQDEATAAAP
KISLAAIRGVHGQGEAAVELESTASTTVFVKNLNFETGDNALYNLFQTCGTIRSCRVATK
KNPHNPQELLSMGFGFVEFKTHAEAVKAMKKLQGAELDGHKLELKLSTRTQQQQGPVARR
EGKLIKGATTKVVVRNVAFEATKKDIRQLFTPYGDVKSVRLPPKSFDPTQHRGFAFVEFS
SKEEAKSAFEALSGSTHLYGRRLNLEFAKDDNSVEKLRSKARTAKRATADQPSKKAKLHN
VDDAKRW
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttcacgcatcatcataaagggcttgcccaagaagttcaacgagtctcgcctt
cgcaccatcttcggcgagcatggcgacatcacccaaatcttgtaccttccgaagcgaagg
atcgcctatgttggctactccgaagaaaaaatggccgagggagccgtggagtatcgcaac
gagacttacattgacacagaccagatcaaggtgtctctcgcctttggcgtcggcgatgag
cgcatcccgcgtccatggagccagtactccaagggatcgtctgcaaacgcagccttgcag
aagaagcgggagatggtgctgaggcagaagaagggcaagaaagcacaggaggaaaagcag
cagaagcaggaagtgaaggaagcaaacgcgagcaagacgcttgcaacgcttgagaaggag
caggacatgctgaagaagttgtacgacgtcgaggcaaatccacagctcaacccagaactg
cacgagtacatgcaggtgatggtgccgaagaacaagcgtctcgtgtgggcgaatgacggc
ggaaacacgggatcgcgcagccggcagggccaacgcgcagccgctggcggcggtggtggt
ggtgacgagagcgtacccattgctgaccgtgatgatggtggcgatggcgatgatgcggag
aagcaagggaaggtcaaggcaacgctgcagagtgtgccgtccaagcgccgcggtggcgag
ggtgtgacatatgtgcgtcagcatcttcagtttgaggattccgacgatgacgacacagat
gacgaggaataccagaccgcgccaggagtggcgaagaaggactcatccgacgaagcgagc
agcgatgatgatgatgacgacgacgatgatgatgacgctggtgacaaggacgaaaaagac
gaggatgaagacatgtctgattcagagtggctcaagtcaaagatcaagtcaaagaagaag
gaggacaatgagggtggcgatgatgataatggcagtgatgatggcagcagcggcagcgac
agcagtgacggtgaggagggcagtgataacgacgatgcacagccctccaagagcaagaag
aagaacaagaagaagaagggcagtgagagcggaaaagcgcagttgttcagtgacgacagc
gacgaggaagatgaggcatcagagcagggagactccattatcgtgttcaccgccaagttg
caagggctgccgttccggtgcaccgagcagcaagtgcgagagttcttctccccgctgtct
gttgtggacattcgctttctgcttgaccggcgaaagcggggcaagggcgtggcgttcgtc
gactttgcaaccaagcgcgactacaaggctgcgctgaagaagcatcgtcaaacactcggt
ccgcggtttgtggaggtgctgccgtccaagacgcggaaactgccggcactgaagccaacg
gaggggcgagaggcgaaagtgtacccggcgccgcttggagaggatgacaaagggctggac
gagactggacgcatcttcgttcgcaacctcgcatatgtgtgcacggaggacgatattcgc
gccctctttgagaagtttggccccctgtctgaggtgcacatgccgcttgatacacagacg
aagaaaccaaagggcatcgcctttgtgacgttccttcatccggagaatgcagttaaggcc
tttacgcaactcgacgcaagcgtcttcaagggccgattgctgcatctattgcctgcacgc
acgcgcgacagcgattctggcattgtcaacgtcgacaccacaaactacaaggagaaaaaa
gcggcagagctaaagagcaagcgagagaacagctacaactggaacacgctgtttcttcga
caggacgctgtcgccgacagcatggctgctgagctcggcgtgtcaaagggcgagctcctt
aacgcgaagagcgacagtgggcttgctgttcggttggccatgggcgagacacgcatcatc
caggacaacaagcagttcctgcgccagcacggcgtgtatctcgatgcattcgacaccagg
gtgacgggtcgcagcaagacggtgattctggtgaagaatttgccgttcaactcgactgag
gcagacctgcggcccatgtttgaaaagcacggcgcggttgacaagtttgtcttcccgccg
tcacgaacaatggcgctcgtctcctttatcgagccatcagaggccagggctgcgttccgg
ggtctggcctatcgcaagtacaagggcgagatgctctatctcgagtgggcgccagagaac
gtctttgctgtgcccgaagaggaggaggaagtgcaggacgaggcaacggctgcggcccca
aagatctccctggcggccattcgaggcgtgcatggtcaaggtgaggctgctgtcgaactc
gagagcacagcgtctacgaccgtgtttgtgaagaacctcaactttgagacgggcgacaac
gccctctacaatctcttccagacctgcggtaccatcaggagttgccgcgttgcgacgaag
aagaatccccacaacccgcaggagctgctgtccatgggctttggctttgtggagttcaag
acgcatgcggaggccgtgaaggcgatgaagaagctgcaaggcgctgagctggacgggcac
aagctggagctcaagctctccacacgaacacagcagcagcaggggcctgtcgcccgcaga
gagggcaagttgatcaaaggcgcaacaaccaaggtcgttgtccgcaacgttgcgtttgag
gcgacgaagaaggacattcgccagctgttcaccccatatggcgacgtcaaatctgtcagg
ctcccaccaaagtcctttgacccaacacaacatcgcgggtttgcgtttgtggaattttcg
tccaaggaggaagccaagtccgcgtttgaggcgctatctggctccacccatctctatggc
cgtcgcctgaaccttgagtttgccaaagacgacaacagcgttgagaagttgcgctcaaag
gcgcgaacagcaaagcgcgcaacagcggaccagccaagcaagaaggcaaagctgcacaat
gttgacgacgcaaagcggtggtga
DBGET
integrated database retrieval system
