KEGG   Salpingoeca rosetta: PTSG_03437
Entry
PTSG_03437        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K14406  cleavage stimulation factor subunit 1
Organism
sre  Salpingoeca rosetta
Pathway
sre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PTSG_03437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_03437
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     PTSG_03437
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR5 WDR55 Beta-prop_WDR3_1st WD40_CDC20-Fz CSTF1_dimer Beta-prop_Aladin ANAPC4_WD40 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 eIF2A Beta-prop_TEP1_2nd Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_RSE1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_RFWD3
Other DBs
NCBI-GeneID: 16076610
NCBI-ProteinID: XP_004996023
UniProt: F2U571
LinkDB
Position
Unknown
AA seq 416 aa
MADAVRHDLRVKRQLYTLVISQLLLDGHTQAARALKTSLGFDRDVAPSSELLDTFTEVAS
DDQKQLVSSITTAAPGPGLQFKKEVEPASVKADYIETLTSPLTGICNCAGFSKDGQLVAI
GCQDGSVRVFDVPASIAEGKNTTTSTVLCKMMDVRTPIFAVAFHPSAKLLVAGSVMGMYV
YDMSDNVEPKKYIHHIEDYFQTNAIDFHPSGQYLAVATAHPQIRLYETKMWKCFTLPEES
QHTAPVTAASRWCATTRTRTRLRRPAARLATCCKAGVVKVWDVVTSTCVLSLEDVFDGAA
GQSLHHKQEQEEEVVDVQVKGGDVKEEEGREEGKDEEGTDEGGKQQEHVKQEQVKQETGK
QQEHVKQEAKDGEQGGPTKQEEGNNASSEATGSGEEEPQSTAMDTAPEAPPAAASS
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggcggatgcggtgaggcacgacctgcgggtgaagcgacagctctacaccctcgtcatc
agccaactgctgttggacggacacacacaggcagcgcgcgcactcaagacatccttgggt
tttgatcgggacgtggcaccgtccagtgaactcctcgacaccttcacagaagtggccagt
gatgaccagaagcagctcgtgtcctccatcacaaccgctgcccctggaccgggcctccag
tttaagaaggaagtggaacctgcctctgtcaaggcagactacattgagacgctcacgtcg
ccactcactggcatttgcaactgcgcggggttctcaaaagacggccagctggttgcaatt
ggatgccaggatggctctgtacgcgtgtttgatgtccctgcctccattgccgagggcaaa
aacaccaccacttccacggtcctgtgcaagatgatggacgttcgcacgcccatctttgct
gtcgcctttcaccccagcgccaagctgcttgtcgcaggatcagtgatgggcatgtacgtg
tatgacatgtcagacaacgtcgagccaaagaagtacattcatcacatcgaggactatttc
cagacgaatgcgattgacttccacccatctggacagtacctcgccgtggccaccgcccac
ccacagattcgtctgtatgagacgaagatgtggaagtgcttcactcttcccgaggagagc
cagcacactgcccccgtcactgcggcaagccgatggtgcgctaccacccgcacgcgtact
cgattgaggcgcccagcggcgcggcttgcgacgtgctgcaaggccggggtggtgaaggtg
tgggacgtggtcacgtccacgtgcgttctctccttggaggatgtctttgatggcgccgcc
ggccaatccctgcatcacaagcaggagcaggaggaggaggtggtggacgtgcaggtgaag
gggggtgatgtgaaggaggaagaagggagagaagaaggaaaggatgaagaaggaacggat
gaaggggggaagcaacaggaacacgtgaagcaagagcaagtcaagcaagagacagggaag
caacaggaacacgtgaagcaagaggcgaaggacggagagcaaggtgggccgacgaagcaa
gaggaaggcaacaatgcatcctcagaggcaacggggagtggcgaggaagagccacagtca
actgcaatggacacagcgccagaagcgcccccagcagcagcatcctcctga

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