Salpingoeca rosetta: PTSG_03440
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Entry
PTSG_03440 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_03440
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
PTSG_03440
TFIIIC, fungi type
PTSG_03440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_12
TPR_14
Fis1_TPR_C
YL1
TPR_CcmH_CycH
CDC45
DUF5740
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
16076613
NCBI-ProteinID:
XP_004996026
UniProt:
F2U574
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MADDDMDHITLPPATGPSSSSHTHGGVPDEIDPLLAEDDGDDVEEDNDFDDDDDDDDDDE
FDEGGDDDNDEDYVNDETAASDDDDIVEEVSTPRRKRAKRQSSSRRSIGSNSAGAAAAAA
ASSSTHAHGMPNPSGGRLRFTDLELSLRTEDVLDDRHHRPADMEKMIAHTQKRRFKKRGV
RSRKNALPSRFINVMGEANKAYTRQAYDVAKRLCQQVVDAAPDCPDPYDTLALVCEEVGD
KPKCFEYRKKAASCRPMRDVNWMELAGLAMEIGRDTEASRLLQRAHKLHPDHLPTLEAMM
AVAEKQGKTFQVVRYCGKYISKCGPNVQLFNRLYKLATQRIPGANVRFRCLDEAADSMLH
VLEKAKAEENPSVDAACVLMTVDLLSQANRHKKCCVTLVPNTLSFRHLAADANHAPCQAC
FAIERGVSLDNVEALITRDPKLNLDERAKASYDTTRVAGAFEVLPVGSTTTSDGFHIPDG
MKLYFRVRLALAHLALNDDDDAAVGILLPLLLHSVEQHYALFHDTISVLISIAKFHLALR
ICEKVRRCEKWDKPALWVLMSRCYKGLHEYETAREHIDHVLKVVPMHKEALRLQREICRE
AGVPLPQSQQRQQRTSKKKRSKKTLTIISNNSIPTEQQLKDHGVADGSRAKHMHAATTSQ
RTLTAVSLRGDLIRIRQLFGKRDLDAVISTAYRPCLFFLQSQLQPTFLRPFRPDVCRQFV
IDAAKVDWQWEAVRGAVSGETGNSWLVYDRDDTRPDGEHLRVFNPKSLSIDEWFEMFIRV
SEAMVNRRRGYEAACMLRRLIHIGRWGEKKPVILYLETLALLGAGCYDAAYLIGRANVLA
HSDANRLWAALYPLFFQTHEALHANRFVLRRLREAPKCPSPFQAQANHSLMSSTYNYAAF
GSSWSAKMADNKDDRALAHLTHSIACLRRTTQRSCPYRRPPLIRALVLFNDYAELRGGVA
ASQEAAYNLARLYHFWGVNHLAVPAYRRALALPSVLDTHRDEYEKEKHGIKGPFNVCSEA
KYASHPLTVLIERCLANLRDPSSEPDPTNLRAECAFNIALIHKPHSPEAAGRLLRSTIAW
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatgacatggaccacatcacgctgccgccagccacggggcctagcagcagc
agtcacacccatggcggtgttcctgacgagattgaccctcttctggcagaggatgatggg
gatgatgtggaagaagacaacgacttcgacgacgatgatgatgacgatgacgatgatgag
tttgatgaaggcggggacgacgataacgatgaagactacgtcaacgacgagacagcagcc
agcgacgacgatgatattgtggaagaggtgtccacgccgcgtcgcaagcgcgccaagcgg
cagagttcatcgcgacggtcaattggcagcaacagcgcaggtgcagcagcagcagcagca
gcttcttcctcaacccacgcgcatggcatgcccaatccaagtggtggccgcttgcgcttc
acggacttggagctgagcctgcgcacagaagacgtcctcgacgaccgccaccaccgcccc
gctgacatggagaagatgattgcacacacacaaaagcggcggtttaagaagcgaggcgtg
cgctcccgcaagaacgcccttccctcgcgtttcatcaacgtcatgggcgaagctaacaaa
gcttacacccgccaggcatacgacgttgccaagcggctgtgccagcaagtggttgacgct
gctccggactgtcctgacccatacgacacactcgctctcgtgtgcgaggaagttggagac
aagccgaagtgctttgagtaccgcaagaaagcggcgagctgccgacccatgcgcgacgtc
aactggatggagctggctggacttgcgatggagattgggcgcgacactgaggcatcacgt
cttctgcagcgtgcacacaagctccacccagaccatctgccgacattggaggcgatgatg
gcggtggcggagaagcagggaaagacgttccaggttgttcgctactgcggcaaatacatc
agcaaatgcggaccaaacgtccagctgttcaaccggctgtacaagttggcgacacagcga
attcccggcgcaaatgtccggttccgctgtctggacgaagcagccgacagcatgctccat
gtgttggagaaggcaaaggcggaggagaacccgagtgtggacgcggcgtgtgtgctcatg
acggtggacctcctctcccaggcaaacagacacaagaagtgttgcgtgacgctggttcca
aacacgctctcatttcgtcatctcgctgcggatgcgaaccacgccccctgccaagcatgc
tttgccattgaacgcggcgtgtcactggacaacgtcgaagccctcatcactcgcgacccc
aagctgaaccttgacgagcgggcaaaggcatcgtacgacacaacccgcgtggcaggcgcc
tttgaggtgctgcctgtcgggtcgacgaccacgagcgatggattccacattcccgatggc
atgaaactctatttccgcgtgcgtctcgctctcgcccatctcgccctcaacgacgacgac
gacgcagccgtcggcatcctgctgccgctgctgctgcactccgtcgagcagcactacgcg
ctttttcacgacaccatctccgttctcatcagcattgcaaagttccatctcgccctccga
atttgcgagaaggtgcggcggtgtgagaagtgggacaagccggcgctgtgggtgctcatg
tctcggtgctacaaaggactgcacgaatacgagaccgcccgtgaacacatcgatcatgtt
ctcaaggttgtaccgatgcacaaggaggcccttcggctgcagcgggaaatctgccgagag
gctggtgttccattgccgcaatcgcagcagcggcagcagcggacatcgaagaagaaacga
tccaagaagactctcaccatcatcagcaacaactccatcccaacagagcagcagctgaaa
gatcatggtgttgcggacggctcaagggcaaaacacatgcacgcggcaacgacatcgcag
cgcacgctgactgccgtttctcttcgcggagacctgattcggatacgtcagctgtttggg
aagcgcgatttggatgccgtcatcagcaccgcatatcggccctgcctcttcttcctccag
tcccaacttcagccgacgtttctgcggccgttccgcccggacgtgtgtcgccagtttgtc
attgacgctgcaaaagtcgattggcagtgggaggctgtgcgtggcgcggtgtctggggag
acgggcaacagctggctcgtgtacgacagggacgacacacgtcccgatggtgaacacttg
cgggtcttcaacccaaagtcgctctccatcgacgaatggtttgagatgttcatccgcgtg
agcgaggcgatggtgaacagaaggcgcgggtacgaggccgcgtgcatgctgcgccgtctc
atccacattggccgctggggagagaagaagccagtcatcctctacctcgagacgctggcg
ctgctcggtgccgggtgctacgacgcggcctatctcattggccgcgccaacgtgctcgcc
cactcggatgcaaaccgcctgtgggcagcgctctatccactcttcttccagacacacgag
gccttgcatgccaaccgctttgtgttgcgtcgtcttcgtgaggccccaaagtgcccgtcc
cccttccaggcgcaggccaaccacagcctcatgtcctccacatacaactacgctgcgttt
gggtcttcgtggagtgcaaagatggcggacaacaaggatgatcgcgcactggcgcacttg
acgcattccattgcgtgcctgcgtcgcacaacacagcgctcctgcccgtaccgccgaccc
ccgctcatcagggcgctggtgctgttcaacgactatgccgagctgcggggcggagttgcg
gcgtcacaggaggcagcgtacaacctcgcgcgtctttatcacttttggggtgtgaaccac
ttggccgttcccgcttaccgccgcgctctcgcactcccgagcgttctcgacacccatcgc
gacgagtacgagaaggagaagcacggcatcaagggcccattcaacgtgtgctccgaagcg
aaatacgcatcccatcccctcacagtgttgattgagcgctgtctcgcgaacctccgtgac
ccatcgagcgagccagacccaacgaacttgcgtgcagaatgcgcatttaacattgcgctc
atccacaaaccgcattcaccagaagcggcaggacggctccttcgctcaaccattgcttgg
tga
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integrated database retrieval system