Salpingoeca rosetta: PTSG_03615
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Entry
PTSG_03615 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14284
nuclear RNA export factor
Organism
sre
Salpingoeca rosetta
Pathway
sre03008
Ribosome biogenesis in eukaryotes
sre03013
Nucleocytoplasmic transport
sre03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_03615
03015 mRNA surveillance pathway
PTSG_03615
03008 Ribosome biogenesis in eukaryotes
PTSG_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_03615
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_03615
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_03615
mRNA cycle factors
Stress granule specific factors
PTSG_03615
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
PTSG_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAP_C
NXF_NTF2
LRR_NXF1-5
LRR_4
LRR_9
NTF2
UBA_8
Motif
Other DBs
NCBI-GeneID:
16075924
NCBI-ProteinID:
XP_004995342
UniProt:
F2U637
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MSRAFQAALGGVARQPPVMQRQQPQGGSLGMFSTANSMSTPYTTPVTASRQAAVAHSRPP
KGESMSGFIMPSGARKKKGRKGKQAMDRDGDVVMSTAARTRTNQKGGRQGKKGSKKKKGK
GSKSSSKRTAMLKSSVAAMRGRIRYNVQVLNPSKLPAETIEQFLRANCAESFHVIKCRET
KNSVIFTLPSVNERAVNTFKRLNSRAMLNDQPISINVKEVEVKGSKASSFELPPELLSPR
YDPASKHLNLSNFVNDPSMSAFMPADGLNSFDLANAIIDVIKANCADVVTLDLSENNIRS
FESWKRLGNVAKKLKNLSLATNDIKDLSALSDLRSCRGIEVLLLLNNPCVVKYSTSRERY
EKALRRYFRKLTEVDQLPVTHTSASKDAPKQSLPQQVLLAPHENNTGPPELVAGCREFLA
KFFSIFDSKRDQLMHAYKEDATFQLHVPSIGHGKTSLRPYAPPKKKGRSVHTKKQGPIDI
VSLLKRFPKSTHQNAAEVAVCVREATGADIKCIVSGRLQEQARDCVLQRVFRREFHLVPA
EETSPAALSGWPCVIQSETLTLAHDTVPSGASAPPNSPSAPAAPAAPAAAVPDVAQKQAM
VQQLAADTGMNFAFSEECLAGNNWIYDAAVANFRELQASNSLPPEAFQQ
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgagccgagcattccaagcagccctcggcggtgtcgcacggcagccgccggtcatgcag
cggcagcagcctcagggtggctcattgggcatgttttcgaccgcaaactccatgtccacg
ccttacaccacccctgtgactgcaagccgccaagcagccgttgcccactctcgacctcca
aagggcgagagcatgtcgggtttcattatgccctccggagcgcgcaagaagaaaggcagg
aagggaaagcaagcaatggatcgtgatggtgatgttgtcatgtcgacagcagcaaggaca
aggacaaatcagaagggaggtcgccaaggcaagaagggcagcaagaagaagaaaggaaaa
ggaagcaagtcaagctccaagcgaacagcaatgctgaagagctctgtggcggcgatgcgg
ggccgcatccgatacaacgtccaggtgctgaatccgagcaagctgccggcggagaccatc
gaacaattcctccgcgccaattgcgcagagagcttccacgtcatcaagtgtcgggaaacg
aagaattcggtcatcttcacgcttccgtctgtgaacgagcgcgcagtgaacacgttcaag
cggctgaacagccgcgccatgctcaacgaccagcccatctccatcaacgtcaaggaggtt
gaggtcaagggcagcaaggcctcatcctttgagcttccaccggagctgttgagtccccgc
tacgatccagcaagcaagcacctcaacctcagcaactttgtcaatgacccttccatgtct
gcgtttatgcctgcggacgggctcaactcgtttgatttggccaacgccatcatcgatgtg
atcaaagcaaactgcgcggacgtcgtgacattggacctgagcgagaacaacatccgctct
tttgagagctggaagcgccttgggaacgttgcaaagaaactcaagaacctcagcctcgcc
actaacgacattaaggatctgtctgcgctgtcggatcttcgcagctgccgcggaatcgag
gtcctgctcctcctcaacaacccgtgtgtcgtcaaatactcaacatcccgcgagcgctac
gagaaggcgctgcgccggtatttccgcaagttgacggaggtggaccagctgcccgtcacc
cacacgtcggcgagcaaagacgccccgaaacagtcgctgccgcagcaggtgctgctcgcg
ccgcacgagaacaacacgggcccgccagaacttgtcgctggatgcagggaattcctcgca
aagttcttctccatctttgattcgaagcgggatcagctcatgcacgcgtacaaggaggac
gccacttttcaactccacgtgccctccattggccacggaaagacgagtctacgcccgtat
gcgccgccgaagaagaaaggaagatctgtgcacacgaaaaagcaaggtcccattgatatc
gtttctctgctcaagcgatttcccaagtcgacgcaccagaatgcagcagaggtcgctgtg
tgtgtgcgcgaggcgacgggtgcggacatcaagtgcatcgtgtctggtcggctgcaggag
caggcgcgcgattgcgttctgcagcgcgtgtttcgacgcgaattccacctcgtccctgcg
gaggagacatcaccggcagcgctgagcggctggccatgcgtcatccagtcggagacgctc
acactcgctcatgacaccgtgccttcgggtgcaagtgcccctcccaactccccgtctgcc
cccgctgcccctgctgcccctgctgctgctgttcccgatgttgcgcagaagcaggccatg
gtgcagcagctggcagccgacacaggcatgaactttgccttctccgaagagtgccttgcc
ggaaacaattggatttacgatgctgcagttgcaaacttcagagaacttcaggcgagcaac
tcattaccaccagaggctttccagcaataa
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integrated database retrieval system
