Salpingoeca rosetta: PTSG_03717
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Entry
PTSG_03717 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K13211
GC-rich sequence DNA-binding factor
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_03717
Spliceosome [BR:
sre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PTSG_03717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
NTR2
DUF3535
Dor1
Motif
Other DBs
NCBI-GeneID:
16076024
NCBI-ProteinID:
XP_004995443
UniProt:
F2U6D8
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MEMMMGASEQRRRNQSKRKKKKKLVVGEHGLTTTPASTGSASASASASTAATPAVGQEAK
GSSGSSKASSSKKQRGKPKQLLSFNEEEEADTHFVIKKDRRRRKTADVPLDQPISAAKPA
FSSTYTPDDLKKLRANQSFTPGSFREQGSLDESVGVPGDDDSEERGADGSFIQSAPLSGT
GLDASMPPEDVAKFARQRRQMLRDQQEYIPLDDDHHDASAVERRVRPAQQRLVRDDDDDD
DDDGGDAVAGGRRSHALSFDAAARRISKQDKLKQMHRAFFEAETSEADEEVQRWEQDALK
RAATVNVVSGVDRRGQARTAATSRLHQHGYYVGMDPGAAIPTDTARPDVSVEALHKKLKE
TLVRSREMATAHRQHASRIDADLTDLKKRLPNEEASLQAACERYNFLKETKIYVKNLVEC
LDVKAREIEQLESEVHAHFKSVSDRLKHRRQQDLTDRRDAILHNVLRLPDEQQQRISRRR
ARIAAAVRAGKVDSKEEADTQAWSDVDDDDDDGGGSDGSDGGVAKQEEEHRTALFQKASA
LLQDVNEDFADIPKIADRFETWKLRQPDSYADAFVSMTLKNILQPLISLQLIPWNPLDRR
SADFESLPWFNDLMLYGCDKETHAQDENDPDAYLVPELIDLILVPKTAGFLEFVYDPLSS
TQTDAAVANVRRMQTDFHIDFSSENGQKLVTGLTAALRRAASGLPPVFVPPPNTLASNDT
KPFQQATIAHTTKFIRNALAWRSVVPEEVLHDIILVSIISKSVLHTMNTCGDADLSVYLL
LQIVQCLPSDWFSAENNPHRDAIRQKLEPFTAFLTQYARKLPQQQQVGTVIGALSSFGES
KKAAKLHGYLASMG
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatgatgggggcaagcgagcagcggcgacggaatcagagcaagcggaagaag
aagaagaagctggtggtgggcgaacatggcctgacgaccacgccagccagcacaggcagc
gcaagcgccagtgcaagcgccagcacagctgccacgccagcggtggggcaagaggcaaag
ggcagcagtggcagcagcaaggcgagttccagcaagaagcagcgtggcaagcccaagcag
ctgctcagtttcaacgaagaggaggaggcggacacgcactttgtcatcaagaaggaccgc
aggcgccgcaagacggcagacgtgccactggaccaacccatctccgccgcgaagcccgca
ttctcctccacatacaccccagatgacctcaagaagctgcgtgccaatcaatcgttcaca
cccgggtcattccgggagcagggcagccttgacgagtccgtgggtgtgcccggtgacgat
gacagcgaggagcgaggtgcagatggcagcttcatccagagcgctcccctgagcggcaca
ggcctcgacgcaagcatgccgcctgaagacgtggccaagtttgcgcggcagcggcggcag
atgctgcgggaccagcaggagtacatcccccttgacgacgatcaccacgatgccagcgcg
gtggagcggcgtgtgcgtcctgcccagcaacggctcgttcgcgatgacgatgatgatgat
gatgacgatggcggtgacgctgtggctggcggtcgtcggtcgcacgcgctctcgttcgat
gcagcggcgcgacgcatctcaaagcaggacaagctcaaacagatgcatcgcgcgttcttt
gaggcggagacgagcgaagcagatgaggaggtacagcggtgggagcaggacgccctcaag
cgcgcagccaccgtcaacgtcgtcagcggcgttgatcggcgcgggcaggcgcgcacagcg
gcgacgtcgcgcctgcaccagcacgggtactatgttggcatggaccctggcgctgctatc
ccaacggacacggcacgacctgacgtgtcagttgaagccctgcacaagaagctgaaggag
acgctggtgcgctcgcgagagatggcgactgctcaccggcagcacgcctcacgcattgac
gcagacctgaccgacctcaagaagaggctgccgaatgaggaagcgtcactgcaggcggcg
tgcgaacggtacaacttcctcaaggagacaaagatctacgtcaagaatcttgtggaatgc
ctcgatgtgaaggcgcgagagattgagcaattggagagcgaagtgcacgcacattttaaa
tctgtttcagatcgtttgaagcacaggagacagcaggacctgacagaccgccgtgacgca
atcctccacaacgttcttcgcctcccagacgagcagcagcagcggatttcacggcggcgc
gcgcggattgcagctgctgttcgcgcagggaaggtggactcgaaggaggaggcggacacg
caggcgtggtcagatgtcgatgatgacgacgatgatggtggcggttctgatggtagtgac
ggtggtgttgcgaagcaggaggaggagcacaggactgcactgttccaaaaggcgtcagcg
ctcttgcaagacgtcaatgaggactttgccgacattccgaagattgcagatcgatttgag
acgtggaaactgcggcagccggactcgtatgcggacgcgtttgtgtccatgacattgaag
aacattctccagccactcatctcactgcagttgataccgtggaatccgcttgacaggaga
agcgcagactttgagtcgctgccgtggttcaatgacctcatgctctatggatgcgacaag
gagacacacgcacaggacgagaacgacccggatgcgtatcttgttccggagctcattgat
ctgattcttgtccccaaaactgcagggttcttggagtttgtgtacgacccgctttcgtca
acgcagacggacgcggctgtcgcaaatgtgcggcgcatgcagactgatttccacatcgat
ttctcatcggagaacggccagaaacttgtcaccgggctgacggcggcgctgcgtcgggcg
gcgtctggccttccaccggtgtttgtgccgccaccaaacactcttgcaagcaatgacacc
aagcccttccaacaggcaaccatcgctcacaccacaaagtttatccgcaatgcgctggcg
tggcgctctgttgttcctgaggaagtattgcacgacatcattctcgtgtcaatcatctcg
aaatctgttctccacaccatgaacacatgtggcgatgcagacctcagcgtttatctcctt
ttgcagattgtgcagtgcctgccgagtgactggttctctgcagaaaacaatccccaccgc
gacgccatcagacaaaagctggagccgttcactgcgtttttgacgcagtatgcacgcaag
ttgccgcagcagcagcaagtcggaacagtgattggggcgctgagctcgtttggcgagagc
aagaaggccgcgaaactgcacgggtacctggcaagcatgggatga
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