Salpingoeca rosetta: PTSG_03806
Help
Entry
PTSG_03806 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K15082
DNA repair protein RAD7
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_03806
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PTSG_03806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD
LRR_6
LRR_4
Ribosomal_L18p
zf-HC5HC2H_2
PHD_2
LRR_Zer-1
LRR_14
Motif
Other DBs
NCBI-GeneID:
16076119
NCBI-ProteinID:
XP_004995539
UniProt:
F2U5F9
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MIARQDHQNKRAATCPTPTTSREMLGEDIMNEDQCTVCGAYGELVCCDGCPRAYHVGCCD
ISAEELKSDAEWLCSQCRGEQGEQGNQDTSGVATTNAPKRAKLEPNPGEHEDHEGEDQQH
NSSSSSGAEQGAPAAASDAERATGSASQQPASAAVTRSSSSQSSPAATSSRASATATPSR
SLSRALSVTAPVTQEQQQPQQQQSGEQSGEQSGEHQQQQQERQQQPLRLEEGRCSFCNQT
GQVLKCTGCSKPFHAYCALLEMDEVPTRTSWFCEACVHSGTSVSATVSATQQSATKAQPN
LDSILRKVDVERIQSGRSLTNSAMRKQTRPRSGQKVHGPTSALSSFLREKGITAPNRGAR
WRRSQRPHSSAHDDDDDDDDDDEDDDDDDDDDVAAVRRGGSSVKGKRASKKQQQKEKEKE
KQKQRKERQRLAVLRATRRVAAQAQDSKPSPEVPPASAASATVGPSSSASTASPSSSSSS
SLFASLAQGKTPANKRLASRKHSATARAIIIDDDDDDDEDGDFFAPASVAGAGDGDRPAL
RRSRRQRRPPPPRSIDDDDDDDDDDDDDDDDDDEFVGLRRRRLGRCGGCGCRVAKGQVLC
VPCLRHSKRDKTNDNDDGDVDNDDYDGDDNGDDATYTPPRRRDQRAAATKCSTSTRSSRS
SNSGGGRRGSAAAKQGGGGGGVSSKARQTPTRRSRTAGAKGSKRAATGSLLHELRGGSLI
SLQDMCVRFLVKHIDCVTDFGDIADDALDRICAVICKQNKLTDATLKLFVRPSRQHLQLF
DCANLSPQSYHDLFVTCGALSTLALDLCGQIDDDRLLMLPRCSPLVSDLQLTGAFKATDA
VMAAVISELKLRRFAFSSSNTLADKTLIALSKQQGLEELELKQCLKISDAEVAPLSSLRN
LTRLSLVQCELITDRGLVAVLETVGPKLTHLNVHGLAQVTDRAVLTIARKCSRLHELNVA
HLPDITDEGVVALADGCKQLRSLNFARCVELTDGSVGKVLTANPRLTHLSLHSLDKLSLD
LLAPLCSLVHLQHLDVSLCRNLDVSDEFVDRLLKHCPDLQQVTAWACLRLTESSLRPRPS
HPSFTLVGCATIV
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgcggcaagaccaccaaaacaaacgtgctgcgacgtgtccgacacccaccacc
agcagagagatgctgggcgaggacatcatgaatgaggaccagtgcacggtgtgcggtgca
tacggggagctggtgtgctgtgatgggtgtccaagggcgtaccatgttgggtgctgtgat
atcagtgcggaggagctcaagtccgatgcggagtggctgtgcagccagtgcagaggagag
caaggagaacaagggaaccaagacaccagtggcgttgccacgaccaacgctcccaagcga
gccaaactcgagccgaaccctggcgagcatgaggaccatgaaggggaggaccagcagcac
aacagcagcagcagcagcggggcggagcaaggagcgcctgcagcggcgagtgacgcggaa
cgcgccacaggcagtgcttcgcaacagccagcgagcgcagctgtgacacgcagctcgtcg
tcccagtcttcgcctgcagcaacgtcatcgcgtgcgtctgccactgcaacgccctcccgc
tccctttctcgagcgttgtcagtgacagcgccagtcacacaagagcagcagcagccgcag
cagcagcagtcgggagagcaatcgggagagcaatcgggagagcaccagcagcagcaacaa
gagcgacaacagcagccgctgcggttggaggaaggacggtgcagcttctgcaaccaaact
ggccaggtgttgaagtgcacaggctgctcaaagccgtttcatgcctactgtgccctgctg
gagatggacgaggtgccaacccgcacgagctggttctgcgaggcgtgcgtgcacagcggc
accagcgtatccgccaccgtcagcgccacgcagcaaagcgccaccaaggcacagccgaac
ctggactcgatcctgcgcaaggtggatgtggagcgaatccagagcgggcggtcgctgaca
aacagcgccatgcgcaagcaaacgcggccgcggtctgggcagaaggtgcacggcccaacg
agcgccctgtcgtcgttcctgcgcgagaagggcatcaccgcaccaaacaggggcgcacgc
tggcgtcgctcgcagcgcccacactccagtgcacatgatgatgacgacgacgacgacgat
gatgacgaggacgatgatgatgatgatgatgatgatgttgctgctgtgcgtcggggcggt
tccagtgtgaagggaaagagggcgagtaagaagcagcagcagaaagaaaaagaaaaggag
aaacagaagcagaggaaggagcgacagcgcctggccgtgctgcgtgccaccaggcgagtt
gctgcgcaagcacaagacagcaagccttcaccggaggtgccaccagcctcagcggcatct
gccaccgttggtccgtcgtcctcagcgtcaacagcatcgccatcatcgtcatcgtcatca
tcgctgttcgcttccctggctcaaggcaaaacgcctgccaacaaacgcctcgcgtctcgc
aagcacagtgcaacagcccgtgccatcatcattgatgacgatgatgacgacgatgaggat
ggtgatttttttgctcccgccagcgtggctggtgctggtgatggtgacagacctgcactt
cggcgctcacggcgacaacgccgaccaccaccaccacgcagcatcgatgatgacgacgac
gacgacgatgatgacgatgatgatgatgatgatgatgatgagtttgtggggctgcgtcgt
cgtcgccttgggcggtgtggcggttgcggctgtcgtgttgcaaaggggcaggttctgtgc
gtgccctgtctgcgccacagcaaacgcgacaagaccaacgacaacgacgatggtgacgtt
gacaatgatgattatgatggtgatgacaacggagatgatgccacgtacaccccaccgcgt
cggcgcgaccaacgtgcagcagccaccaagtgcagcaccagcactcgcagcagtcgcagc
agcaacagcggtggtggccgacgtggcagcgcagcggcgaagcagggaggaggaggagga
ggagtgagcagcaaggcacgtcagacaccaacacgacggtcgagaacagcgggcgcaaag
ggcagcaagcgggcagcgacaggctcgcttctgcatgagctgcggggaggatcactcatc
tccctgcaggacatgtgcgtgcggtttctcgtcaaacacattgattgcgtcacggacttt
ggcgacattgcggacgatgccctggatcgcatctgtgctgtcatctgcaagcagaataag
ctgacagatgcaacgctcaagctgtttgttcgtccgtcgcgccagcacttgcagctgttt
gactgcgccaatctctcgccgcagagctatcacgacctgtttgtgacgtgtggtgccctc
tccaccctcgccctcgacctctgcggccaaatcgacgacgatcggctgctgatgctgccg
aggtgctcgccgctcgtgtcagatcttcagctcacgggcgcattcaaggcgacagacgcg
gtgatggccgctgtcatctcggagctgaaactcaggcgctttgcattcagctcctcaaac
accctcgccgacaagactctcatcgcactctcaaagcagcaaggcttggaggagcttgag
ttgaagcagtgcctgaagatatcggatgcagaagtcgcgccactgtccagtctccgcaac
ctcacccgcctctccctcgtccagtgcgaactcatcacagaccgcggcctggttgctgtg
ctggaaactgtgggcccgaagctgacgcatctcaacgtgcacggcctggcgcaggtgact
gaccgggcagtgctgacaattgcgcgcaagtgctcgcgtctgcacgagttgaatgtggcg
catcttcccgacattacagacgagggagtagtcgcacttgccgacggctgcaaacagctc
aggtcgctcaattttgctcgctgcgtggagttgacggatgggagcgtgggaaaagtgctg
acggccaacccacgcctcacccacctgtcgttgcacagcctggacaagctgtcccttgat
ctccttgcaccactgtgctccctcgtgcacctgcaacacctggatgtgtcgctgtgtcgc
aacttggacgtgtcggacgagtttgttgatcgcctcctcaaacactgcccagacctccag
caggtgactgcgtgggcgtgcttgcggttgacagagagctcgctccgcccgcgtccctcg
cacccgtccttcaccctcgtcggctgcgccacaatcgtgtga
DBGET
integrated database retrieval system
