Salpingoeca rosetta: PTSG_03964
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Entry
PTSG_03964 CDS
T04136
Name
(RefSeq) ubiquitin
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
sre
Salpingoeca rosetta
Pathway
sre03010
Ribosome
sre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PTSG_03964
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PTSG_03964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sre03011
]
PTSG_03964
04121 Ubiquitin system [BR:
sre04121
]
PTSG_03964
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sre04147
]
PTSG_03964
Ribosome [BR:
sre03011
]
Ribosomal proteins
Eukaryotes
Small subunit
PTSG_03964
Archaea
PTSG_03964
Ubiquitin system [BR:
sre04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
PTSG_03964
Exosome [BR:
sre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PTSG_03964
Exosomal proteins of colorectal cancer cells
PTSG_03964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Ubiquitin_5
IBR
Dsc3_N
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
16075440
NCBI-ProteinID:
XP_004994860
UniProt:
F2U7D9
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKNYTTPKKIKHKHKTVKLAALKYYKVDGSGKVTRLLRE
CPSEECGAGVFMAAHFDRQTCGKCGLTYRFDEKQEA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctcacgggcaagaccatcaccctcgaggtcgagccctcc
gactcgatcgagaacgtcaaggccaagatccaggacaaggagggtatcccccctgatcag
cagcgccttatcttcgccggtaagcagctcgaggatggccgcaccctgagcgactacaac
atccagaaggagtccacactgcaccttgtgctccgcctgcgtggtggtggcaagaagcgc
aaaaagaagaactacaccacccccaagaagatcaagcacaagcacaagaccgtcaagctg
gctgccctcaagtactacaaggttgatggctctggcaaggttacccgtctgctccgcgag
tgcccctctgaggagtgcggtgctggtgtcttcatggctgcccactttgaccgccagacg
tgcggcaagtgcggtctgacctacaggttcgacgagaagcaggaggcataa
DBGET
integrated database retrieval system