Salpingoeca rosetta: PTSG_04067
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Entry
PTSG_04067 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
sre
Salpingoeca rosetta
Pathway
sre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PTSG_04067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_04067
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PTSG_04067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
16075542
NCBI-ProteinID:
XP_004994964
UniProt:
F2U7P3
LinkDB
All DBs
Position
Unknown
AA seq
1327 aa
AA seq
DB search
MAGKRQSQGKSPLKQGSLLGFITRSAKPSAKSSEATPSKTPPPLGAEAVKRELPAGKKTK
TQQQLLQTQPSEAGQQAEPHPSKKAKKITEARGASDDGSDGDDSAMTTPASVCDTASQEA
EASSTTAAKAEAKTEAPSSQQKASPVTKRTDQAAQESEEPDQTEKDEDKEEEEEEEEEEE
QVMYTSRGRRVRRVVKYFDSDDESASSDDEEQEAVRRALRTRRKGGAQQQQKQQKQQKLK
KNQTKGGGKGRRRVARMVNSDDDDDSESDEYVPDDADEAIMDEDDDDEQEMMQTARVIQE
DEEPAVEEPESDILNEDDEEEDVPTPRKKRSKRTPSKASSSPSRSNSSSGGGGGGGGGLT
SASGLSFGSIPTAGKKQGSSNGSPERYAWLARPRDKNKRTEGHPEFDPTSLYIPPSGWAK
MTPFEKQYWDIKQHHWNTILFFKKGKFYELYERDAEIGNREFQLKMTDRVNMCMAGVPEI
TFPDWAARFLAKGYKVARVDERENAIAKKMRETKTGKKGPKIIERKLSAVYTQGTLMGDF
VIGDMSNFIMAIKEDEDTRTYGVCFADTATAEFNVCHFVDDAARTAFETLIVQVMPKELV
LPKKSLSKVRVRCLSERPCLVGGEGRGTKGGRRFAFWSSQMTIDNLEKGTRARASVDACS
PERLRAFLSKDEAMSALGGLVSYFKTLLLDKSLLSQGTFFSYDPLHHGATLVIDGQTLQN
LDVLCNMQDGTTSGSLLELLCQCHTAFGKRMFRRWLCHPLRRVNDITERQNAVVDLTEHV
DLRDALSSMLKPLPDLERLLSRVHVGNCKLSDLISLLDAFDAVSGQDEGCVGSLFPNLKA
ELKAIANIFDRQEAKATDKLTPKPGALPEYDVAVDQMQSIEKRLNEHLANVRREFGAGKA
ISFWQPSAGRERYQIQVRVAMKKVPSSWKLMSSTKANKRYHSPEAVRLVAKWLEAEETIS
QFLKTFFSRVLNSINEHREKFGAAVSALSQLDCLLSLYRAKDSMGSPMCRPVFVSTSGDK
ASRAVLDLREMRHPTLQHSSSITDYIPNDTHLGGEEATTMVLTGPNMGGKSTLLRQTCIA
VIMAQLGCWVPAESFTLTPVDRIFTRIGANDNIVAGRSTFMVELKETATILNKATSSSLV
ILDELGRGTSTFDGYAIAFAVLSHITDAIRCRCMFATHYHLLTDELKTNPNVTNYNMACV
VDDHQKDVTFLYKLQPGVCSKSYGMNVAHMAGVMDSIVETAKEKAVQYEATSRFGKLQDR
KAKQLALLRFVETVTALTSDDGDNGDQQPRPQERVERFKEAVATLKPILDKLQRASPATP
TQTDPMQ
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaagcgacagtcgcaaggcaaatcgccattgaagcaaggcagcttgctgggt
ttcatcacccgctcggcaaagccatccgccaagtcgtcggaggcgacgccgtccaagacg
ccgccgccgcttggggcagaggcagtgaagcgggagctaccagccggcaagaagaccaag
acacagcagcagctgttgcagacgcagccgagcgaggctggccagcaagcagagccacac
ccgtccaaaaaggccaagaagatcaccgaggcgcgtggcgcctccgacgatggcagcgat
ggtgacgacagcgcaatgacaacacccgcctccgtgtgcgacaccgcatctcaggaggcc
gaggccagcagcacgactgctgccaaggcagaagccaagacagaagccccctcttcacag
cagaaggcaagccccgtaaccaagcgcaccgaccaggctgcgcaggagagcgaagagccc
gaccagactgagaaagacgaagacaaggaggaagaagaggaggaggaggaagaggaggag
caggtcatgtacacgagccgtgggcgccgcgtgcgtcgggtggtcaagtactttgacagc
gatgatgagtctgcgagcagcgatgacgaggagcaagaagccgtgcgacgtgcactgcgc
acccgtcgcaagggcggcgcacagcagcagcagaagcagcagaagcagcagaagttgaag
aagaatcagacaaagggcggtggcaagggcagacggcgcgtggcacgcatggtcaactct
gacgatgacgacgactctgagtctgacgagtacgtgccggacgatgcagatgaggccatc
atggacgaggacgatgacgacgagcaggagatgatgcagacggcgcgcgtcatccaggag
gacgaggagcctgccgtggaggaacccgagtccgacattctaaacgaggatgacgaagag
gaggatgtcccaacaccaagaaagaagcgcagcaagcgcacaccaagcaaggcgtcttca
tcacccagccgcagcaacagcagcagcggtggtggtggtggcggcggcggtgggctcacg
agcgccagcgggctgtcgtttggaagcattcccaccgcagggaagaagcaaggcagcagc
aacggcagcccagagcggtacgcgtggcttgcacgtccgcgcgacaagaacaagcggact
gaggggcatccagagtttgacccaacctccttgtacatcccaccgtctggctgggcgaag
atgacaccgtttgagaagcagtattgggacatcaagcagcaccactggaacacaatcctc
ttcttcaaaaaggggaagttctatgagctgtacgagcgagacgccgagattggcaaccgc
gagttccagctcaagatgacagatcgtgtcaacatgtgcatggctggtgtccctgagatc
acgttcccagactgggctgcccgcttcctggccaaagggtacaaggttgcacgcgtggac
gagcgagagaacgccattgcaaagaaaatgcgcgagacaaagaccgggaagaaaggcccc
aagatcattgagcggaagttgagtgcggtgtacacgcagggcaccctcatgggcgatttt
gtcatcggagacatgtcaaacttcatcatggcaatcaaggaggatgaggacacccgcacg
tacggcgtgtgctttgccgacacagcaactgcggagttcaacgtgtgtcattttgtggac
gatgctgcccgcaccgcattcgaaacgctcattgtacaggtcatgcccaaggaattggtc
ctcccgaagaaaagcctgtccaaggtgcgtgtgaggtgtttgagtgaaaggccttgcttg
gttgggggagaggggaggggtacaaagggagggaggaggttcgctttttggtcatcgcaa
atgaccatcgacaacctggagaagggtacgcgtgcacgtgcaagtgttgatgcatgttcg
cctgagcgcttgcgtgcgtttctgagcaaagacgaggccatgtctgcgctgggaggcctg
gtgtcctatttcaagacgctgctcttagataagagcctgttgtcgcagggcacgtttttc
tcgtatgacccgctccaccacggcgcaacactcgtcattgatggacagacgctgcaaaac
ctggacgtgctgtgtaacatgcaggacggcaccacgtccggctctcttctcgagctcctc
tgccaatgccacaccgctttcggaaaacgcatgttccggcgatggctgtgccatcctctt
cgtcgcgtgaatgacatcacagagcgccagaatgcggttgtggacctgacagagcacgtg
gacctccgtgacgctctctcgtccatgctcaaaccactgccggatcttgagcgtctcctc
tcgcgtgtgcacgtcggaaactgcaagctctccgatctcatttcgcttctggacgcattt
gacgccgtgagtggccaggacgagggctgtgttggatcgctgtttccgaatctgaaggcg
gagctgaaggccattgcgaacatctttgatcgtcaagaggcaaaggccacagacaagctg
acgccaaagcctggggcgctgccggaatacgacgtggctgtggatcaaatgcagtccatt
gagaagcgtctcaacgagcatcttgcgaacgttcgccgcgagtttggcgccgggaaagca
atttccttctggcagccgagcgcagggagagaacgttaccagatccaggtgcgcgtggca
atgaagaaagtcccaagctcgtggaagctcatgtcttcaaccaaggcgaacaagcgctat
cacagcccggaggccgtacgtcttgtcgccaagtggctcgaggctgaggaaaccatctca
cagtttctgaagacgttcttctcacgcgtcctcaactccatcaacgagcaccgcgagaaa
tttggcgccgcggtgtctgcgttgtcgcagctcgactgtctgctgtcgctttaccgcgca
aaggacagcatggggtcgccaatgtgccggcccgtgtttgtcagcacaagcggcgacaag
gcgtcgcgtgcggtgttggacttgcgcgaaatgcgacacccaacactgcagcactccagc
agcatcacagactacattccaaacgacacccacctcggtggggaggaggccacgacgatg
gtgctcactggccccaatatgggcggtaaatccacgcttctgcggcagacgtgcatcgct
gtcatcatggcgcagctcggctgctgggtgccagcggagtcgtttacgctgacgccggtt
gatcgcatcttcacgcgcatcggcgcaaacgacaacatcgttgccggccgctccactttc
atggttgagttgaaagagactgcgacgatcctgaacaaggcaacgtcatcctcccttgtc
atcttggatgagctggggcgtggcaccagcacgtttgatggctacgcgattgcgtttgct
gtcctctcccacatcactgacgcaatcaggtgtcgttgcatgtttgcaacgcactatcac
ctgttgacggacgagctgaagacaaacccaaatgtcaccaactacaacatggcctgtgtt
gttgacgaccaccagaaggacgtgacgttcctttacaagctgcagcctggcgtttgctcc
aagagctacggcatgaatgttgcacacatggctggcgtcatggactcgattgttgagacg
gccaaggagaaggcggtgcagtacgaagcgacgtcgcggtttggaaagctgcaggaccgc
aaggcaaagcagctggcgcttcttcggtttgtggagacggtgacagcgctgacgagcgac
gatggcgataatggtgatcagcagccgaggccgcaggagcgggtagagcggtttaaggag
gcggtggcaacgctcaagcccatcttggacaagctgcagcgcgcgtcaccagcaacgcca
acacagacagacccgatgcagtga
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