Salpingoeca rosetta: PTSG_04101
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Entry
PTSG_04101 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sre04121
]
PTSG_04101
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sre04147
]
PTSG_04101
Ubiquitin system [BR:
sre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
PTSG_04101
Exosome [BR:
sre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PTSG_04101
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP120
HEAT_2
HEAT_EF3_N
RIX1
Cnd1
MMS19_C
MMS19_N
ARM_ECM29
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
16075576
NCBI-ProteinID:
XP_004994998
UniProt:
F2U6L2
LinkDB
All DBs
Position
Unknown
AA seq
1240 aa
AA seq
DB search
MAEALNHFLEKSQSDDKDLRFMAMNDLMAAMRAQTVNWDERATRQVLRQLLQLINDTNTE
VQNLAMQCTAAVVAIANANALTDTVTTLVTQAVDTKDKERDVATTALKNIMAQISAFSPE
AAMLCEAVMGPVLGSICESTSDSVTLDNLGLLVDLCTRFPKQLESQQQLIVELMLPLLSH
SRTLVQKRAIAAVCALGPSLSDNVLGQTMNAIISTLESHKEGQLALTHATFVASLGREIG
TRVSGYLERLVPPLLALVDVDEDDDLRDAALRSLETCARQAPKAFAPFLEAACELCIKYL
SYDPNYDYGDDDEDMGDATMDEEDEDESDVDFSDDDLSDDDDVSWKVRRGAAKLLRTATV
TRPDLLQHFTNAIAPVIIKQFREREENALVDMLQTYATLLSQIEVVEGASAGAVSAEDSN
SLHAVLQQQLPTVVARTKPHLVSKNMLCRESALEIHHHIAALLPGAFASHFPTLAAGVKA
CLTDKMATANVKQQALRFLECVVKTHTATDLDDHLQDLASLVVLGVSDSFYKTVSRALGV
ASSFVRMLRPSPDQTPTQQQQAAMLTILEGVRAPFTSGDADLEVREKGIICVGETLARFG
DVLDASAAADLLQVLMARLTNDMTRVVAVAALETICSSAVGVDVSSSAVMAVGMLTDYLR
LTNASLRNNSLKALTALVTRHPTAVAESDVQRLLGELVALVAPRDMQAVALALPLVAACV
NAQPGTLHTVRATLLPAVAAVVGAKNMNAACMPGVCMCLRTVVAKGVPHEEIEGLLRAQC
VDPKQSKEAIRYLAKASACAAAADPALQARLFARAFDAVWHLEGNERLYHLYTLAALGVG
MDVAQVKPDAFSAIQSLLATEADDFKLGVAHTLGSLAAGSPQYVETLAMAVRQEQEQQRA
QGADAGEHANLYVLALKQTTHELLQTAEGRDRLGQCAGTIWPTLSALMDHDSESVRNLIA
EAMSIVCLLDVPHYMAVLTEALKHADPRVRGCAVNVARFLLNKGGEENRGALRSILPPFV
LAIGDDNNDVRRVALGTFKAALLRHISLVIDVLDQAMELIYGETRVRPDLIQDIQMGPFK
HKVDRGADTRKAAYECLYLLLETCPERLVFSTFLSHILQGLSDDHDIQILSNLILMKACK
RVPELLLSKLDEIAQVLGSVLTNAPEKKATKQEIDKLDEVKRVCISCVYALNALPGSDKS
PGFTSLLSTIHNSGELFRRWEDVKREATTGAPGMDVAADL
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcactgaaccacttccttgagaagtctcagtccgatgacaaggacctgcgg
ttcatggccatgaacgacctcatggccgccatgcgtgcacagacagtcaactgggacgag
cgcgccactcgacaggtgttgcgccagctgctgcagctcatcaatgacaccaacactgaa
gtgcagaacctcgccatgcagtgcacggccgctgttgtcgccattgccaatgccaatgcc
ctcacagacactgtgacgacacttgtaacccaggctgtcgacacgaaagacaaggagcgc
gacgtcgccacaacagcgttgaagaacatcatggcacagattagcgccttttctccagag
gccgccatgttatgcgaagccgttatggggcccgtcctcggaagcatctgcgagtcgacg
agcgacagcgtgacgctggacaaccttggcctgcttgttgacctgtgcacgcggtttccc
aagcagcttgagtcgcagcagcagctcattgttgagctcatgctccctctcctctcgcac
tcacgcaccctcgtccagaagcgcgcgattgctgctgtgtgcgcactcggccccagcctc
tctgacaacgtgctcggccagactatgaacgccatcatctccacgctcgagagccacaag
gaaggccagctcgccctcactcacgccaccttcgtcgccagcctcggccgggagattggt
acacgggtgtccgggtatcttgagcggctcgtaccgccgctgctcgcgctcgtcgatgtc
gacgaagacgacgacctgcgcgacgccgctctccgcagcttggagacgtgcgcacgccag
gctcccaaggcctttgccccattcctcgaagccgcgtgcgagctgtgcatcaagtacctt
tcctacgatccaaactacgactacggcgacgatgacgaagacatgggcgacgcgacgatg
gacgaggaggacgaggatgagagcgatgtcgacttttcagatgacgatttgtccgacgac
gatgacgtctcatggaaggtgcggcgcggggctgcgaagctgctgcggacggcgactgtg
acgcgcccggacctcctgcagcactttacaaacgcaatcgcccccgtcatcatcaagcag
ttccgagaacgggaggagaatgcacttgttgacatgctgcagacgtatgccacgctgctg
tctcagattgaggtggtggagggcgcgagtgccggcgctgtgtctgccgaggacagcaac
tccttgcatgccgtcctgcagcagcagctgccaaccgtggtcgcccgtacaaaaccacat
ctcgtcagcaagaacatgctgtgccgtgagagcgcgttggagatccaccaccacattgcc
gccctgctgcccggggcatttgcttcccactttcccaccctcgctgccggcgtcaaggcc
tgcctcacggacaaaatggcgacggcgaatgtgaagcagcaggcgctgcggttcctggag
tgtgttgtgaagacgcacacggctaccgacctcgacgaccatctgcaggacctcgccagc
cttgtggtgctgggcgtctctgacagcttctacaagacggtgtcgcgtgcgcttggcgtt
gcctcctccttcgtgcgcatgctccgcccgtccccagatcagaccccaacacagcagcag
caggcagcgatgctcaccatcctcgagggtgtgcgggcgccgtttacgagcggggacgcc
gatctcgaggtgcgggagaagggcatcatctgtgttggcgagacgctggcgcggtttggc
gatgtgctggacgcctctgcggccgctgacctgctgcaggtgctcatggcgcggctgacc
aacgacatgacgcgcgtcgtcgccgtcgctgcgctggagaccatctgctcctctgccgtg
ggcgtggacgtgtcctcctcggcggtgatggcggtcggcatgctcacagactacctgcgc
ctcaccaacgcctccctgcgcaacaacagcctcaaggcgctgacggcgctcgtcacgcgc
cacccgacggctgttgcggagagcgatgtgcagcggctgcttggcgagcttgtagccctt
gttgccccacgcgacatgcaggcggtggcgctcgccctgccgctcgtcgccgcgtgtgtg
aatgcgcagccgggcacgctgcacaccgtgcgggcaaccctgctgcctgcggtggcggcc
gtggtgggcgcaaagaacatgaacgccgcgtgtatgccgggcgtgtgcatgtgtctgcgg
acggtggtggccaagggcgtgccccacgaggagattgagggcctgctgcgcgcgcagtgc
gttgacccgaagcagagcaaggaggcgattcgctacctggccaaagcctccgcctgtgcc
gcggctgccgacccggccctgcaggcgcgcctgtttgcccgcgcctttgatgccgtgtgg
catttggagggcaacgagcgcctctaccacctctacacgctcgcagcgcttggcgtgggc
atggacgtggcgcaagtcaagcccgacgcgtttagcgccatccagtcgctgctggcgacg
gaggcagacgacttcaagctcggcgtggcgcacacgctcgggtcgctcgcagcggggtcg
ccgcagtacgtggagacgctggcgatggctgtgcgacaggagcaggagcagcagcgtgca
cagggggccgacgcgggcgagcacgcgaacctgtatgtgctggcactgaagcagacgacg
cacgagctgctgcagacggcggaggggcgcgatcgcctggggcagtgtgcgggcaccatc
tggccaacgctctctgcgctgatggaccacgacagcgagagcgtgcgcaacctgatcgcc
gaagccatgtccattgtgtgcctgctcgacgtgccgcactacatggcagtcctcacagag
gccctcaagcacgccgacccgcgcgtccgtgggtgtgcggtgaacgttgcgcgcttcctg
ctgaacaagggcggggaggagaaccgaggcgcgctgcgcagcatcctgccgccgtttgtg
ctggcgattggcgacgacaacaacgacgtgcgacgcgttgccctcggtacattcaaggcc
gccctcctcagacacatttccctcgtcatcgatgtgcttgaccaggcgatggaactgatc
tatggcgagacgcgcgtgcgaccagacctcatccaggacatccagatgggcccattcaag
cacaaggtcgaccgcggtgccgacacgcgcaaggccgcgtatgagtgcctgtatcttctc
ctggagacgtgcccagagcgtcttgtgttctccaccttcctcagccacatcctgcaaggc
ctctccgatgaccacgacattcagatcctgtccaacctgattctgatgaaggcatgcaag
cgcgtgccggagctgcttctctccaaactcgacgaaatcgcacaagtcctcggcagcgtc
ctcacaaacgcgccggagaagaaggcgacgaaacaggagattgacaagctggacgaagtc
aagcgcgtgtgcatttcctgcgtgtatgccctcaatgcccttccaggcagcgacaagtcg
cctgggttcacgtcgctgctgtcgaccatccacaattctggggagctgttcaggcgctgg
gaagacgtcaagcgggaagcaacaacgggtgcacctggaatggatgtggccgcggatctg
tga
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