Salpingoeca rosetta: PTSG_04124
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Entry
PTSG_04124 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_04124
Enzymes [BR:
sre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTSG_04124
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
Helicases
PTSG_04124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Phage_YunG-like
Motif
Other DBs
NCBI-GeneID:
16075597
NCBI-ProteinID:
XP_004995019
UniProt:
F2U6N3
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MSAAAKGSKKKSTSWGSLGLDPRTAKASQRMGWSRPTAIQRAVITCALEGRDILARARTG
SGKTGAYALPLINAVLKAKEERATTASGGEDHGILALVLVPTKELVDQTADTLKQIAAHC
EQQVSVVSVVASASSSRSRKKMDDASLLTDLPDIVVATPTTVLSKILEKRVVVTDDFKML
VLDEADLILTYGHDDAVRQLSTVLPSVKQTILLSATMSEDIQALKSHIVLRSPAIIKLEE
SDLPDDEQLKQHALVCNDEDKYLNFYALLALKLLSGKTLVFVNTVNECYKLKLFLEKFSI
RSCALNSRLPANSRRHIVTQFNKGIYDIIIASDETDGNQGKKIKPRNAKFVASDNEYGVV
RGVDFKDVTNVVNFDFPPTVERYVHRVGRTARGRQSGIALSFVDPRQRSALHRVEKFLQE
QAKAQDDDDEDVDGNDEGGKAETEIDAQDGEIIKPYTIKVDVVKPLKYRVDDAIAHVTKR
DIDLAIRRDIELQLLNSETLKAHFVENPRDLQVLRHDTVLHDVKDIKPHLKDLPFYLKPK
STDAQRLRVSKKKNKNSKGGNSDGGRGGGRGGGGGGRGGRGGRGRGRGRGAGRGAGRGGG
RGGGRGGGGGAKSGKRRSAQDPLRSFKSAKRS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagcagcgaaagggagcaagaagaagtctacatcgtgggggtccttggggctt
gaccccaggacagccaaggcatcgcagcgaatgggctggtcaaggcctaccgctattcag
cgtgccgtcatcacgtgtgcgctggagggccgcgacatcctcgcccgcgcccgcacaggc
tctggcaagacaggcgcatacgccctgccgctcatcaacgcagtgctcaaggcgaaggag
gaacgcgcaacaacagcctctggcggtgaggatcatggaattctcgcccttgttcttgtt
cccaccaaggagctggtggaccaaactgcagacacactcaagcaaattgcagcacactgc
gagcaacaagtgagtgtcgtctccgtcgttgcatcagcctcgtcctcccgctctcgcaag
aagatggatgacgcgtcactgctgacggacctgccggatattgttgttgccacgccaacc
actgttctctccaagatcctggagaagcgagtggttgtgacagacgactttaagatgcta
gtgctcgacgaagcagatctcatcctcacatatgggcacgacgatgccgtacgacagctc
tcaaccgtcctgccatccgtcaagcagaccattctcctgagcgcgacgatgagcgaggac
atccaggcgctgaagagccacattgtgctgcggtcgccggccatcatcaaacttgaggag
tcggatctccccgatgacgagcagctgaaacagcacgcgctcgtgtgcaatgacgaagac
aaatatctcaacttctacgccctgctcgcactgaagctcctgtcgggcaagacgctggtg
tttgtgaacacggtcaacgaatgctacaagctgaagctgtttcttgagaagttttccatc
cgctcgtgtgcgctgaactcgcggctccccgccaacagccgccgccacattgtcacgcag
ttcaacaagggcatctacgacattatcatcgcttccgacgagactgatggtaatcagggc
aagaagatcaaaccgcgcaacgcaaagtttgttgcgagcgacaatgagtacggtgttgtg
cgtggcgtcgacttcaaggacgtcaccaatgtcgtcaactttgatttcccgcccaccgtc
gagcgatacgtccaccgcgttggccgcactgctcgggggcggcagagcgggattgcgctg
tcatttgttgatccgcgacagcggtccgcgttgcacagggtggagaagtttctgcaggag
caggcaaaggcacaagacgatgacgacgaggatgtggatggcaatgatgagggtggcaag
gcagagactgagattgatgcgcaggatggggaaattatcaagccatacacgattaaggtg
gacgttgtgaagccgctcaagtatcgtgtcgacgatgccattgcgcacgtgacgaagcgt
gacatcgacctcgccatccgccgcgacattgagctccagctcctcaactcagaaacactc
aaggcacactttgtggagaacccgcgcgatctgcaggtgttgcgacatgacacggttctg
catgacgtcaaggacatcaagccgcacttgaaggatttaccattttacctcaagcccaaa
tccacagatgcacagcggcttcgtgtgtccaagaagaagaacaagaacagcaaaggcggc
aacagtgatggtggtcgtggcggtggccgtggtggtggtggtggtggccgtggtggccgt
ggaggtcgtggcagggggcgtggtcgtggtgctggtcgtggtgctggtcgcggtggtggt
cgtggtggtggtcgtggtggtggtggtggggccaagagcggtaagaggcggtctgcccag
gaccctttgcggtcgttcaagtctgcgaagcgatcatag
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