KEGG   Salpingoeca rosetta: PTSG_04222
Entry
PTSG_04222        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_04222
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_04222
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    PTSG_04222
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     PTSG_04222
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_IFT140_1st WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR75_1st WDR90_beta-prop_4th PROPPIN PEP5_VPS11_N Beta-prop_WDR41 DSE1_N WD40_RFWD3 Beta-prop_WDR75_2nd CFAP251_N Beta-prop_SPT8 Beta-prop_RSE1_2nd
Other DBs
NCBI-GeneID: 16075698
NCBI-ProteinID: XP_004995118
UniProt: F2U6Y2
LinkDB
Position
Unknown
AA seq 309 aa
MALGHASPNFKDLSAELFAPVRMRFSPTGRQLVTASFDGTVCVWERTADTVTEWECYATL
EGHENEVKDACFSASGEYLASCSRDKTVWIWEHLEDTDEYDCCSILNDHTQDVKCLRWHP
SLDLLASGSYDNTICLYRPDPDISDWTRVAHLTGHESTVWSLAFNASGSLLASASDDKTV
RIWKFTPPEQPSAFSGTDGTWTCVTTLSGFHTRSVYSVDWCHVTNLLATGCGDNHVRVFR
QTQVESASAPSFEKVYDDQTHTQDVNAVLWCAQEPAGHNATARILLASASDDEVITLARF
QEMGPSNCV
NT seq 930 nt   +upstreamnt  +downstreamnt
atggcactgggacatgcgtcacccaacttcaaggacctcagcgcggaactattcgctccg
gtacgcatgaggttttcgccgactggaaggcagctcgtcactgccagttttgatggaacc
gtttgcgtgtgggagcgcaccgccgacacagtgactgaatgggagtgctacgcgacgctc
gaagggcacgagaatgaggtgaaggacgcgtgcttctccgcatctggcgagtaccttgct
tcctgttccagagacaagaccgtgtggatttgggaacatcttgaagacacggacgagtat
gactgctgctccatcctcaacgaccacacacaagatgtcaaatgcctccgttggcaccct
tcccttgacttgcttgcgagcggcagctacgacaacacaatttgcttgtaccgcccggat
ccagacatctcagactggacgcgcgttgcgcatctgacgggccacgagagcacggtgtgg
tcgcttgcctttaatgcaagcgggtctctccttgcgtctgcaagcgacgacaagactgtc
cgcatctggaagttcacccctccagagcagcccagtgcgttttctggcactgacgggacg
tggacgtgcgtcacgacgttgtcgggctttcacacacgaagcgtgtactcggtggactgg
tgccatgtcacgaatctgctggcaacaggttgtggcgacaaccacgtgcgcgtctttcgc
caaacacaggtcgagtcggcaagcgcgccctcgtttgagaaagtctatgacgaccaaacg
cacacgcaggacgtaaatgcggtgctgtggtgcgcccaagaacctgcgggacacaacgcc
accgctcgcattttgcttgcgtcagcatctgacgatgaggtcatcacacttgcccgattc
caggaaatggggccaagcaactgcgtttga

DBGET integrated database retrieval system