Salpingoeca rosetta: PTSG_04225
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Entry
PTSG_04225 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K11292
transcription elongation factor SPT6
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_04225
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_04225
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PTSG_04225
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PTSG_04225
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
Tex_YqgF
HTH_44
S1
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
16075701
NCBI-ProteinID:
XP_004995121
UniProt:
F2U6Y5
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MTSKSGAFFMDNEAEEEEDENYEPGAGGSDDDDDNEGDDEMADFIAEGDAEEEEDEDVRR
VKSKLADEEQMLTEDDYELVRERLGEAGLKRLLAGRKRKLKAHADDEDESDEELPTKPRT
VADLKKDLFDEPAAQARAKPRATFLFDEDEDEEDEEVEEVPERQPRRKRTAAGRRDDDDE
AALLASEGAVLRYADEDLYAEGEEVEAEAAMFPPAKMPKRTRAQFEPIELEEAHMTAEDN
TIRMQDQPERVQLKFGGELREPPEPQLVDAEADWIYATLYDANFNATRRITQWSDPILSR
IFDPMRIQGDTPYRMKEAIRNVLSQLHYDPAGAVQADEDDEDDEDTQGGDQRGGSGPREV
PFIAQHRKELAHFPHILNVHDLWLIDDYDVRFSQHMNRKAKLLDARDRLMEVLDEDDHRL
RLLTETERNFMQEVQFEDSLRDCSDYLSYFFAQESQGDTSLKRKTSRQYHVCERLGITKF
IKHFGVSVTDIADVLLRARAVTMTPDHQMPEDTAVDFAIAPFDTTEKVVEAARYCLAVEI
AMHPEIKSHWREQLADAIRGGGGVFITTRPTRTGYQTVEPWERIAKFRFLTEKPISTLYD
DTFLWMEQAVAEKKLKLDMFIDGAIISNIKQLIMDKCQPDPPTMTTAEWQKEFEKALDMA
HEMLAESMIRDLRIKLREEAKMFVVEQCANYVRNIVNRRPVEPPHLDQEQNIAALVLAPA
GTRSFMVVIGPEGDVIDHVGLDWLHARRMTDRVEKFRKDLEKIKVFLEKHQPYVVGLGAD
SVASKFFARELSAVVEDALYREGEPPVEVELMPVDMARVYASGRRSAQEFPKYPTELKMA
VSIARRMQAPELEMAALFGPGKDILCIQMHPLQKSISQADLFDALYREVMVAVNRTGVRI
NSAVSKPHIAHALEFVCGLGPRKADMLISTIRTQFRGRIINRHQTINDEVAQQALLELQE
AKESPFKTEHLIEFAKRLRERGEGDLSMTVQDIYRELLRPLRDDRHEFLPMRAFEPMPGQ
RPDDRPVTENDIKLFFCLTQQAIPFKGAVEVHEHNRPAELYFHEWLPVDYSVVEGQLVDA
EVVRFDLGRMDETRVHRVMLRCSNDLPGFLMASDVSDDFIADPREVMQVGQMVTARVLQI
DVHFMRLKLTTKGSELRGETEWYCPANWGYDSMYDEQAEREFKAALKPQEQKRSKYAKRM
VTHPRFFNVSYAKALAILSDYSEGDGLFRPSSRGTNQLTLTWKALPDMLVHVAVDEDPKY
KATAESLSSRLTIRIGNAIKEFEDLDEIIFSYLNPTYDNVRRITGNRKYFADKPVEEVEK
MLVERKQKEPKRIPYMFSPRKDHHGCCFWLSFLPGSTSVRRWHLYVLPDGYLMDNHTFPS
LNDLVSWFKRNFQRLSQMSKQRDALEQRQKEKNPHEHQLKQLPPQAQAAASRAAHAAKTR
TKKPSAIRTLSRSHGSHDHPYHHRPADFPPAGPPHLTPSRAGRSGDYDAARPGAGSYGGP
PLPPQPSLATAWGADSSAATSSAPAAAPPRDEPPTGRADAWSTPTPRTPQPPPSQHPAPA
WGTPAPPQATDSQQPSASAAWGTPVASSSSAQQNQQQETPRVQEQQRHGSTSSAWGAPPP
TTDEQQQQAAPRSPPKTPTTPAASWGQPAPQSSSQQQSQSGWGNTNNNSSSSNSSNTNNN
NNNSSSSSTAGAPAAPPAPSSAGNAWGSTAASANKANTNDSMDVRGDDTQQQRQQQQQQQ
QQQQQQQAGGWGWGQSSTQQTQAESQVPETQPDA
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgaagagcggtgccttcttcatggacaatgaagccgaggaagaagaagatgag
aactacgagcctggagcagggggcagcgatgacgacgacgacaacgagggcgacgatgaa
atggccgacttcatcgcagagggcgatgcagaggaagaggaggatgaggacgttcgtcgc
gtcaaatccaagctcgctgacgaggagcagatgttgacggaggacgattatgagctcgtc
cgtgagcgccttggtgaagcaggcctcaagcggctgctcgccggtcggaagcgcaaactg
aaagcgcacgcggacgacgaggacgagagcgacgaagagcttcccacgaagccgcgcact
gtggcggacttgaagaaagatctgtttgatgaacccgccgcacaggcccgcgcgaaaccg
cgcgccacgttcctgtttgatgaggacgaggacgaagaggatgaagaggtagaggaggtg
ccagagcgacagccgcggcgcaagcggacggcagccggtcggcgcgacgatgacgacgag
gcggcgctactggccagcgagggcgccgtgctgcgctatgccgacgaggacctgtacgcg
gagggcgaggaggttgaggctgaagcagccatgttcccgccagccaagatgccaaagcgc
acgcgcgcgcagtttgagcccattgagcttgaggaggcgcacatgactgcagaggacaat
accatccgcatgcaagaccagcctgagcgcgtgcagctcaagtttggcggggagttgcgt
gaacccccggagccgcagctggtggacgcggaggccgactggatctacgcgaccctctac
gacgcaaacttcaacgccacccgccgcatcacacagtggagcgaccccattctcagccgc
atctttgatccgatgcgcatccagggcgacaccccgtaccgcatgaaagaggcaatccga
aatgtgctgagtcagctccattatgacccggccggtgctgtccaagcagacgaggatgac
gaggatgacgaagacacccagggcggcgaccagcgtggcggctctggtccgcgcgaggtt
ccgtttattgcgcaacatcgcaaggagcttgcacacttcccgcatatcctcaacgttcac
gacctgtggctgattgacgactacgacgtgcggttcagccagcacatgaaccgcaaggca
aaactcctcgacgcccgcgaccgcctcatggaggtccttgacgaagacgaccaccgcctt
cgtctcctcacagagacggagcgcaacttcatgcaagaggtgcaatttgaggacagcctt
cgcgattgctccgattacctatcgtacttcttcgcgcaggaatcacagggcgacacttcg
ctgaagcgcaagacgagccggcaatatcacgtgtgcgaacgcctcggcatcaccaagttc
atcaagcactttggtgtctccgtcaccgatattgcggacgtgctccttcgcgcccgcgcc
gtgacgatgacgccggaccaccagatgccggaggacaccgccgtcgactttgccatcgcc
ccctttgacacaacagagaaggttgttgaggcagcgcggtactgcctggcggttgagatt
gcgatgcaccccgagatcaagtcgcactggcgggagcagctggccgatgccatccgcggt
ggcggcggcgtcttcatcaccacgcgcccgacccgcacaggataccagaccgtcgagccc
tgggagcgcatcgcaaagttcaggttcttgacggagaagccaatctcgacgctgtacgac
gacacgttcttgtggatggagcaagccgttgcagagaagaaactcaagcttgacatgttc
attgatggtgccatcatctccaacatcaagcagctcatcatggacaagtgccagcctgat
ccgccaacaatgacgacggccgagtggcagaaggagtttgagaaggcgctggacatggcg
cacgagatgctggccgagagcatgatccgagacctccgcatcaagctgcgcgaggaagcc
aagatgttcgtggttgaacagtgtgcaaactacgtgcgcaacattgtcaatcgccggccc
gtcgagccaccgcacctcgaccaagagcaaaacattgctgcgcttgtgcttgcgcctgct
ggcacgcgttcgttcatggttgtgattgggcccgagggcgatgtcatcgaccacgttggc
ctcgactggctccacgccaggcgcatgacggaccgtgttgagaagttccgcaaggatctt
gagaagatcaaggtgttcctggagaagcaccagccgtacgtggtcggcctcggcgccgat
tccgtcgcatcaaagttcttcgcgcgcgagctcagcgctgttgttgaggatgcgttgtac
cgggagggagagccgcctgtggaggttgagttgatgcccgtggatatggcccgcgtgtac
gcaagcggccgccgcagcgcacaggagtttccaaagtaccccacggagctcaagatggca
gtctccattgctcgccgcatgcaggcgccagagcttgagatggcagcgctgtttgggcct
ggaaaggacatcctgtgcatccagatgcatccgctgcagaagtccattagccaggccgac
ctctttgatgccctctaccgcgaggtgatggttgccgtcaaccggaccggtgttcgcatc
aacagcgccgtcagcaaaccccacatcgcacacgccctcgagtttgtgtgcggtcttggg
ccgcgcaaagcagacatgctcatctccaccatccgcacgcaattccgcggccgcatcatc
aaccggcaccagacgatcaacgatgaagttgcccagcaggcgctgcttgagctgcaggag
gcgaaggaaagccctttcaagacagagcatctcatcgagtttgcaaagaggctgcgcgag
cgaggtgagggtgacctctccatgaccgttcaggacatttacagggagcttttgcggccc
ctcagggatgaccgtcacgaattccttcccatgcgcgcattcgagcccatgccgggccag
cggccagatgaccgtcctgtgaccgagaacgacatcaagctcttcttctgccttacgcag
caggcgattcccttcaagggcgccgtggaggtccacgagcacaacaggcctgcggagctg
tacttccacgagtggctccctgtcgattacagcgtggtggagggccagcttgtggatgcc
gaagttgtgcgcttcgatctcgggcgcatggacgagacgcgcgtgcaccgcgtcatgttg
cgctgcagcaacgacctgcctggtttcctcatggcgtcggatgtcagcgatgactttatt
gccgacccgcgggaggtgatgcaagtcgggcagatggtgacggcgcgtgtgctgcagatt
gacgtgcactttatgcgcctcaagctcaccaccaaagggtctgagctgcgcggcgagacg
gagtggtactgccctgccaactggggctacgacagcatgtatgatgagcaggccgagcgg
gagttcaaggccgcactcaagccgcaggagcagaaacgatccaagtacgccaagcgcatg
gtgacgcaccctcgcttcttcaacgtctcgtatgcaaaggcgcttgccatcttgtccgac
tactctgagggcgatgggctcttccgcccaagcagtcgcggcacaaaccagctcactctc
acgtggaaggccctgccggacatgctggtgcacgttgctgttgatgaggatcccaagtac
aaggcgaccgcagagtcgctcagctcgcgcctcaccatccgcatcggcaacgccatcaag
gagtttgaggacttggacgaaatcatcttcagctacctcaacccaacgtacgacaacgtg
cgccgcatcacagggaaccgcaagtactttgcggacaaaccagttgaggaagttgaaaaa
atgcttgttgagcggaaacagaaggagcccaaacgcattccgtacatgttcagccctcgc
aaggatcaccacggctgctgcttctggctgtcgtttcttccaggatcgacatctgtgcgc
cgctggcatctgtacgtcttgcccgatggctacttgatggacaaccacaccttcccctcc
ctgaatgacctcgtgtcctggttcaagcgcaacttccagcggctgagccagatgtcaaag
cagcgggacgctctcgagcagcggcagaaggagaaaaatccgcacgagcaccagctcaag
cagttgccgccccaggcacaggccgcagcctcccgtgccgcacacgcagcgaagacgcgc
accaagaagccttcggccatccgcacgctctcacggtcgcacggtagccacgaccatccc
taccaccaccgcccggcagacttcccaccggctggtccccctcacctcaccccgtcccgt
gccggccgcagtggcgactacgatgctgcgcgccctggtgctggctcctatggtgggcca
ccactccccccgcagccgtcgctcgccacagcgtggggtgcagactcgagtgcagccact
tcctctgcaccggcggctgcaccgccgcgcgacgagccgccgaccggccgtgctgatgca
tggagcacgccgactccgagaacaccgcagccgcctccgtcacagcacccggcgcccgcg
tggggcacaccagcgccgccccaggccaccgactcgcagcagccgagcgccagtgctgca
tggggcacgccagtcgcctcctcctccagcgcacagcaaaaccaacagcaggagacacca
cgggtgcaggagcagcagcgtcatggatcaacttcctctgcttggggtgcaccaccgccc
acaacagatgaacagcagcagcaggcagcgccacggtcaccgcccaagacgccaacaacg
cctgccgcttcctggggccagcctgcaccgcagtcgtcctcccagcagcaatcgcagtcc
ggttggggaaacaccaacaacaacagcagcagcagcaacagcagcaacaccaacaacaac
aacaacaacagcagcagcagcagcacggccggtgcccctgcagcaccaccagccccgtca
tcggctggaaacgcgtgggggagtacagcggcgtcagcaaacaaagccaacaccaatgac
agcatggacgtgcgtggtgacgatacacaacaacaacggcaacagcagcagcagcagcag
cagcagcagcagcagcaacaggcgggtggctgggggtggggccagtccagcacgcaacag
acgcaggcggaatcacaagtgccggagacacagcctgacgcttaa
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integrated database retrieval system