KEGG   Salpingoeca rosetta: PTSG_04225
Entry
PTSG_04225        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K11292  transcription elongation factor SPT6
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_04225
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_04225
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     PTSG_04225
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     PTSG_04225
SSDB
Motif
Pfam: SH2_2 YqgF HHH_7 Tex_YqgF HTH_44 S1 OB_RRP5_4th
Other DBs
NCBI-GeneID: 16075701
NCBI-ProteinID: XP_004995121
UniProt: F2U6Y5
LinkDB
Position
Unknown
AA seq 1774 aa
MTSKSGAFFMDNEAEEEEDENYEPGAGGSDDDDDNEGDDEMADFIAEGDAEEEEDEDVRR
VKSKLADEEQMLTEDDYELVRERLGEAGLKRLLAGRKRKLKAHADDEDESDEELPTKPRT
VADLKKDLFDEPAAQARAKPRATFLFDEDEDEEDEEVEEVPERQPRRKRTAAGRRDDDDE
AALLASEGAVLRYADEDLYAEGEEVEAEAAMFPPAKMPKRTRAQFEPIELEEAHMTAEDN
TIRMQDQPERVQLKFGGELREPPEPQLVDAEADWIYATLYDANFNATRRITQWSDPILSR
IFDPMRIQGDTPYRMKEAIRNVLSQLHYDPAGAVQADEDDEDDEDTQGGDQRGGSGPREV
PFIAQHRKELAHFPHILNVHDLWLIDDYDVRFSQHMNRKAKLLDARDRLMEVLDEDDHRL
RLLTETERNFMQEVQFEDSLRDCSDYLSYFFAQESQGDTSLKRKTSRQYHVCERLGITKF
IKHFGVSVTDIADVLLRARAVTMTPDHQMPEDTAVDFAIAPFDTTEKVVEAARYCLAVEI
AMHPEIKSHWREQLADAIRGGGGVFITTRPTRTGYQTVEPWERIAKFRFLTEKPISTLYD
DTFLWMEQAVAEKKLKLDMFIDGAIISNIKQLIMDKCQPDPPTMTTAEWQKEFEKALDMA
HEMLAESMIRDLRIKLREEAKMFVVEQCANYVRNIVNRRPVEPPHLDQEQNIAALVLAPA
GTRSFMVVIGPEGDVIDHVGLDWLHARRMTDRVEKFRKDLEKIKVFLEKHQPYVVGLGAD
SVASKFFARELSAVVEDALYREGEPPVEVELMPVDMARVYASGRRSAQEFPKYPTELKMA
VSIARRMQAPELEMAALFGPGKDILCIQMHPLQKSISQADLFDALYREVMVAVNRTGVRI
NSAVSKPHIAHALEFVCGLGPRKADMLISTIRTQFRGRIINRHQTINDEVAQQALLELQE
AKESPFKTEHLIEFAKRLRERGEGDLSMTVQDIYRELLRPLRDDRHEFLPMRAFEPMPGQ
RPDDRPVTENDIKLFFCLTQQAIPFKGAVEVHEHNRPAELYFHEWLPVDYSVVEGQLVDA
EVVRFDLGRMDETRVHRVMLRCSNDLPGFLMASDVSDDFIADPREVMQVGQMVTARVLQI
DVHFMRLKLTTKGSELRGETEWYCPANWGYDSMYDEQAEREFKAALKPQEQKRSKYAKRM
VTHPRFFNVSYAKALAILSDYSEGDGLFRPSSRGTNQLTLTWKALPDMLVHVAVDEDPKY
KATAESLSSRLTIRIGNAIKEFEDLDEIIFSYLNPTYDNVRRITGNRKYFADKPVEEVEK
MLVERKQKEPKRIPYMFSPRKDHHGCCFWLSFLPGSTSVRRWHLYVLPDGYLMDNHTFPS
LNDLVSWFKRNFQRLSQMSKQRDALEQRQKEKNPHEHQLKQLPPQAQAAASRAAHAAKTR
TKKPSAIRTLSRSHGSHDHPYHHRPADFPPAGPPHLTPSRAGRSGDYDAARPGAGSYGGP
PLPPQPSLATAWGADSSAATSSAPAAAPPRDEPPTGRADAWSTPTPRTPQPPPSQHPAPA
WGTPAPPQATDSQQPSASAAWGTPVASSSSAQQNQQQETPRVQEQQRHGSTSSAWGAPPP
TTDEQQQQAAPRSPPKTPTTPAASWGQPAPQSSSQQQSQSGWGNTNNNSSSSNSSNTNNN
NNNSSSSSTAGAPAAPPAPSSAGNAWGSTAASANKANTNDSMDVRGDDTQQQRQQQQQQQ
QQQQQQQAGGWGWGQSSTQQTQAESQVPETQPDA
NT seq 5325 nt   +upstreamnt  +downstreamnt
atgacgtcgaagagcggtgccttcttcatggacaatgaagccgaggaagaagaagatgag
aactacgagcctggagcagggggcagcgatgacgacgacgacaacgagggcgacgatgaa
atggccgacttcatcgcagagggcgatgcagaggaagaggaggatgaggacgttcgtcgc
gtcaaatccaagctcgctgacgaggagcagatgttgacggaggacgattatgagctcgtc
cgtgagcgccttggtgaagcaggcctcaagcggctgctcgccggtcggaagcgcaaactg
aaagcgcacgcggacgacgaggacgagagcgacgaagagcttcccacgaagccgcgcact
gtggcggacttgaagaaagatctgtttgatgaacccgccgcacaggcccgcgcgaaaccg
cgcgccacgttcctgtttgatgaggacgaggacgaagaggatgaagaggtagaggaggtg
ccagagcgacagccgcggcgcaagcggacggcagccggtcggcgcgacgatgacgacgag
gcggcgctactggccagcgagggcgccgtgctgcgctatgccgacgaggacctgtacgcg
gagggcgaggaggttgaggctgaagcagccatgttcccgccagccaagatgccaaagcgc
acgcgcgcgcagtttgagcccattgagcttgaggaggcgcacatgactgcagaggacaat
accatccgcatgcaagaccagcctgagcgcgtgcagctcaagtttggcggggagttgcgt
gaacccccggagccgcagctggtggacgcggaggccgactggatctacgcgaccctctac
gacgcaaacttcaacgccacccgccgcatcacacagtggagcgaccccattctcagccgc
atctttgatccgatgcgcatccagggcgacaccccgtaccgcatgaaagaggcaatccga
aatgtgctgagtcagctccattatgacccggccggtgctgtccaagcagacgaggatgac
gaggatgacgaagacacccagggcggcgaccagcgtggcggctctggtccgcgcgaggtt
ccgtttattgcgcaacatcgcaaggagcttgcacacttcccgcatatcctcaacgttcac
gacctgtggctgattgacgactacgacgtgcggttcagccagcacatgaaccgcaaggca
aaactcctcgacgcccgcgaccgcctcatggaggtccttgacgaagacgaccaccgcctt
cgtctcctcacagagacggagcgcaacttcatgcaagaggtgcaatttgaggacagcctt
cgcgattgctccgattacctatcgtacttcttcgcgcaggaatcacagggcgacacttcg
ctgaagcgcaagacgagccggcaatatcacgtgtgcgaacgcctcggcatcaccaagttc
atcaagcactttggtgtctccgtcaccgatattgcggacgtgctccttcgcgcccgcgcc
gtgacgatgacgccggaccaccagatgccggaggacaccgccgtcgactttgccatcgcc
ccctttgacacaacagagaaggttgttgaggcagcgcggtactgcctggcggttgagatt
gcgatgcaccccgagatcaagtcgcactggcgggagcagctggccgatgccatccgcggt
ggcggcggcgtcttcatcaccacgcgcccgacccgcacaggataccagaccgtcgagccc
tgggagcgcatcgcaaagttcaggttcttgacggagaagccaatctcgacgctgtacgac
gacacgttcttgtggatggagcaagccgttgcagagaagaaactcaagcttgacatgttc
attgatggtgccatcatctccaacatcaagcagctcatcatggacaagtgccagcctgat
ccgccaacaatgacgacggccgagtggcagaaggagtttgagaaggcgctggacatggcg
cacgagatgctggccgagagcatgatccgagacctccgcatcaagctgcgcgaggaagcc
aagatgttcgtggttgaacagtgtgcaaactacgtgcgcaacattgtcaatcgccggccc
gtcgagccaccgcacctcgaccaagagcaaaacattgctgcgcttgtgcttgcgcctgct
ggcacgcgttcgttcatggttgtgattgggcccgagggcgatgtcatcgaccacgttggc
ctcgactggctccacgccaggcgcatgacggaccgtgttgagaagttccgcaaggatctt
gagaagatcaaggtgttcctggagaagcaccagccgtacgtggtcggcctcggcgccgat
tccgtcgcatcaaagttcttcgcgcgcgagctcagcgctgttgttgaggatgcgttgtac
cgggagggagagccgcctgtggaggttgagttgatgcccgtggatatggcccgcgtgtac
gcaagcggccgccgcagcgcacaggagtttccaaagtaccccacggagctcaagatggca
gtctccattgctcgccgcatgcaggcgccagagcttgagatggcagcgctgtttgggcct
ggaaaggacatcctgtgcatccagatgcatccgctgcagaagtccattagccaggccgac
ctctttgatgccctctaccgcgaggtgatggttgccgtcaaccggaccggtgttcgcatc
aacagcgccgtcagcaaaccccacatcgcacacgccctcgagtttgtgtgcggtcttggg
ccgcgcaaagcagacatgctcatctccaccatccgcacgcaattccgcggccgcatcatc
aaccggcaccagacgatcaacgatgaagttgcccagcaggcgctgcttgagctgcaggag
gcgaaggaaagccctttcaagacagagcatctcatcgagtttgcaaagaggctgcgcgag
cgaggtgagggtgacctctccatgaccgttcaggacatttacagggagcttttgcggccc
ctcagggatgaccgtcacgaattccttcccatgcgcgcattcgagcccatgccgggccag
cggccagatgaccgtcctgtgaccgagaacgacatcaagctcttcttctgccttacgcag
caggcgattcccttcaagggcgccgtggaggtccacgagcacaacaggcctgcggagctg
tacttccacgagtggctccctgtcgattacagcgtggtggagggccagcttgtggatgcc
gaagttgtgcgcttcgatctcgggcgcatggacgagacgcgcgtgcaccgcgtcatgttg
cgctgcagcaacgacctgcctggtttcctcatggcgtcggatgtcagcgatgactttatt
gccgacccgcgggaggtgatgcaagtcgggcagatggtgacggcgcgtgtgctgcagatt
gacgtgcactttatgcgcctcaagctcaccaccaaagggtctgagctgcgcggcgagacg
gagtggtactgccctgccaactggggctacgacagcatgtatgatgagcaggccgagcgg
gagttcaaggccgcactcaagccgcaggagcagaaacgatccaagtacgccaagcgcatg
gtgacgcaccctcgcttcttcaacgtctcgtatgcaaaggcgcttgccatcttgtccgac
tactctgagggcgatgggctcttccgcccaagcagtcgcggcacaaaccagctcactctc
acgtggaaggccctgccggacatgctggtgcacgttgctgttgatgaggatcccaagtac
aaggcgaccgcagagtcgctcagctcgcgcctcaccatccgcatcggcaacgccatcaag
gagtttgaggacttggacgaaatcatcttcagctacctcaacccaacgtacgacaacgtg
cgccgcatcacagggaaccgcaagtactttgcggacaaaccagttgaggaagttgaaaaa
atgcttgttgagcggaaacagaaggagcccaaacgcattccgtacatgttcagccctcgc
aaggatcaccacggctgctgcttctggctgtcgtttcttccaggatcgacatctgtgcgc
cgctggcatctgtacgtcttgcccgatggctacttgatggacaaccacaccttcccctcc
ctgaatgacctcgtgtcctggttcaagcgcaacttccagcggctgagccagatgtcaaag
cagcgggacgctctcgagcagcggcagaaggagaaaaatccgcacgagcaccagctcaag
cagttgccgccccaggcacaggccgcagcctcccgtgccgcacacgcagcgaagacgcgc
accaagaagccttcggccatccgcacgctctcacggtcgcacggtagccacgaccatccc
taccaccaccgcccggcagacttcccaccggctggtccccctcacctcaccccgtcccgt
gccggccgcagtggcgactacgatgctgcgcgccctggtgctggctcctatggtgggcca
ccactccccccgcagccgtcgctcgccacagcgtggggtgcagactcgagtgcagccact
tcctctgcaccggcggctgcaccgccgcgcgacgagccgccgaccggccgtgctgatgca
tggagcacgccgactccgagaacaccgcagccgcctccgtcacagcacccggcgcccgcg
tggggcacaccagcgccgccccaggccaccgactcgcagcagccgagcgccagtgctgca
tggggcacgccagtcgcctcctcctccagcgcacagcaaaaccaacagcaggagacacca
cgggtgcaggagcagcagcgtcatggatcaacttcctctgcttggggtgcaccaccgccc
acaacagatgaacagcagcagcaggcagcgccacggtcaccgcccaagacgccaacaacg
cctgccgcttcctggggccagcctgcaccgcagtcgtcctcccagcagcaatcgcagtcc
ggttggggaaacaccaacaacaacagcagcagcagcaacagcagcaacaccaacaacaac
aacaacaacagcagcagcagcagcacggccggtgcccctgcagcaccaccagccccgtca
tcggctggaaacgcgtgggggagtacagcggcgtcagcaaacaaagccaacaccaatgac
agcatggacgtgcgtggtgacgatacacaacaacaacggcaacagcagcagcagcagcag
cagcagcagcagcagcaacaggcgggtggctgggggtggggccagtccagcacgcaacag
acgcaggcggaatcacaagtgccggagacacagcctgacgcttaa

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