Salpingoeca rosetta: PTSG_04238
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Entry
PTSG_04238 CDS
T04136
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
sre
Salpingoeca rosetta
Pathway
sre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PTSG_04238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sre03021
]
PTSG_04238
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_04238
Transcription machinery [BR:
sre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PTSG_04238
RNA polymerase I system
PTSG_04238
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PTSG_04238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
BaffR-Tall_bind
Motif
Other DBs
NCBI-GeneID:
16075714
NCBI-ProteinID:
XP_004995134
UniProt:
F2U6Z8
LinkDB
All DBs
Position
Unknown
AA seq
114 aa
AA seq
DB search
MAEEVVNPMDICPAQTKKLRACIACGLVKTSQQFVENGCENCEEFLGLKGNPEGVETCTS
GNFHGIIALIEPGDSWVARAKRLGEVTGSLADDAVKELPEPIRQRYLAEQQQAE
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaagtggtgaatcccatggacatctgcccggcgcagacaaagaagctgcga
gcgtgcattgcctgcggcctggtgaagacgagccaacagtttgtggagaatgggtgtgaa
aattgtgaagagttccttggactcaagggtaacccagaaggcgttgagacatgcacaagc
ggcaacttccacgggatcattgctctgatcgaacccggcgattcgtgggtggcgagagca
aaacggctcggtgaggtgacggggagcctggctgacgacgcagttaaggagttgccagag
cccatccgacaaagatatctcgcagaacagcaacaagcagagtag
DBGET
integrated database retrieval system
