Salpingoeca rosetta: PTSG_04245
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Entry
PTSG_04245 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K08740
DNA mismatch repair protein MSH4
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_04245
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Meiosis-specific proteins
Others
PTSG_04245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_22
Sec23_helical
ATPase_2
AAA_14
Motif
Other DBs
NCBI-GeneID:
16075721
NCBI-ProteinID:
XP_004995141
UniProt:
F2U705
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MTTPRPVSTAAAWAMPSASATTATPASLSSRNQSRSRSARQSSRARRGMSTSTSARSGTA
PPARTPRSVRHTTPAAAAVPTTICAVVEGRGKARGEIGLASVDLNGAVAELSQFSDGATY
LKTFTKVHYFSPIEVVMPSTMCAEKGSKLFTALREHHPDLDIVNIPRKFFAEEKGTQVSR
RVCAYDFRSVRFEVQDKFYALAAFGALIKYVSHVQNMVFAPNSLKIIYSGNTCATMMDAT
TVKHLELLQSIRNPSNTAHSLFGVLDHTKTVSGGRFLRAELLQPPSDVMTIQTRQEAVEF
LLNNQADFEQLGDLLSRFEDMESLITHCIQIPHAQDATTAERRIGSLLRLKHNMELVPQL
CQHLSKSSSSLLGTFAATLQDGSFAAINDAIVRVFHEEARVDQGALNRRTQHIYAIREGI
HGMLDVARRTYGEAVADITELCQQLSERYEVDLALEYTAQRGFFFITQSKAQLPAAFKQV
SKSRQRTGLVTQELQQMNTRIRESMLEIFTLANTICADLFAEIRAHLGSLYRLTEIIAMT
DFLQSLATFASFVPTRYVRPEFSDTLAVKGGCHPILMSLNRRQELVPNDTFASKETSFIV
ITGPNMSGKSVYLRQVALLQVLAQLGSFVPAEFACFRVCDQIFTRIGNEDSFETNSSTFM
VECQELNFILRNATEQSLIIIDELGRGTSPEEGLGLCFAACEYMIQLQAFTFFATHFSEL
CRLDIYPSVEK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgccgagaccagtcagcactgctgccgcatgggcgatgccctctgcgtcggcg
accacggcaacgcccgcaagcctcagtagccgcaatcaaagccgaagccgaagtgcgcgg
cagagttctcgcgcacgccgcggcatgtccacatccacttccgctcgttctggaacagct
cctcccgctcgaaccccgagaagcgtgcgccacacaacaccggcggctgccgccgtcccc
actaccatctgcgctgtcgttgaaggccgcggaaaggcgaggggagagattggactcgct
tccgtggacttgaacggtgctgtggccgagctgtcgcagttcagcgatggtgcgacgtac
ctgaagacattcaccaaggtccactacttttctccaattgaggtggtcatgccttccacc
atgtgtgcggagaaagggtcaaaactcttcacagccttgcgcgagcaccacccggacttg
gacattgtcaacatcccgcgcaagttctttgccgaagaaaagggtacgcaagtaagcagg
cgtgtgtgtgcttatgactttcgcagcgttcgatttgaagtgcaagacaagttctacgct
ttggctgcgtttggcgccctgatcaagtacgttagccatgtgcagaacatggtctttgca
cccaactcactcaagatcatctactccggcaacacgtgcgctacaatgatggatgcaacc
acggtgaagcatttggagctgctccagagcattcgcaacccaagcaacacagcacactcc
ttgtttggcgttctggatcacaccaagactgtcagcggaggccgctttcttcgtgcagag
ctgctacagccgccatcagatgtcatgacaatccaaacgcgccaagaagccgttgagttc
cttctcaacaatcaagctgattttgaacagctgggagacctgctcagccgattcgaggat
atggagtcgctcatcacccactgcattcagattcctcacgcgcaggatgcaacgacggcg
gagcggaggatcggcagcttgcttagactcaagcacaacatggagctggttccgcagctg
tgtcaacacctaagcaagagcagcagcagcttgttgggcacattcgcagccacgctgcag
gacggtagctttgctgccatcaacgatgccattgtgcgcgtctttcacgaagaagcccgt
gtggaccaaggcgcactcaaccggcgtacccagcatatctacgccatacgcgaaggcatt
cacggcatgctggacgttgcacgacggacgtacggagaggcagtcgccgacattacagag
ttgtgccagcagctgtcggaacgctacgaggttgatttggctctggaatacacggcccag
cgaggattcttcttcatcacacagagcaaggcgcagctgcccgcagcattcaagcaggtc
tcaaagtctcggcagcgaacgggtttggtgacgcaagaattacaacagatgaacacacgc
atccgggagagcatgttggagattttcaccctggcaaacacgatttgtgcagacctgttt
gcggagattcgggcgcaccttggcagtttgtacagactgacagaaatcattgcgatgaca
gactttttgcagtcgctcgcgacatttgcgtcgtttgtgcccacacgatacgttcgccca
gagttttcagacacgctcgcggtcaagggcggctgtcacccgattctcatgtccctgaac
cggaggcaagagctcgttccaaacgacacgtttgccagcaaggaaacaagcttcatcgtc
atcacggggcccaacatgagcggaaagtcggtgtaccttcgccaagtggctctgctgcag
gtgttggcacagctgggcagctttgtgcccgcagagtttgcttgctttcgtgtgtgtgat
cagatcttcacgcggattggtaatgaggacagcttcgagacaaactccagcacattcatg
gtggagtgccaagaactcaactttatcctgcggaacgccacggagcaaagcttgatcatc
attgatgaactgggcagagggacaagcccggaagaagggcttggattgtgttttgccgca
tgtgagtacatgatccagcttcaggcgtttacgttctttgccacacacttctcggagctg
tgccgtcttgacatttatcccagcgttgagaagtaa
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