Salpingoeca rosetta: PTSG_04262
Help
Entry
PTSG_04262 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
sre
Salpingoeca rosetta
Pathway
sre03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
PTSG_04262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_04262
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
PTSG_04262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ipi1_N
Sporozoite_P67
DOP1_C
Motif
Other DBs
NCBI-GeneID:
16075741
NCBI-ProteinID:
XP_004995161
UniProt:
F2U725
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MVRTRKKAGKSSKEVDFKKKKNKVGKSKRQENATVTTFKTRAIHVTSSLREVDHAKEIVT
QQGQTISDLLAKAGHYNKNVRADAVHAMALLIEDHPELLQQAAILLAVVERVCPLISDLS
HRVRTEVAALLKIIASSCDQTQLVPYFPLMVAHTSTAMTSIDHYTREDALNVIDVWIDHL
PALLGEMGHKLLDNFLHLISSQSSGGSGGGSSSGGLSSSLASSSAIGSMPGGRQLSGAPS
SALSSNKGRKSVLQRLNRFTQIALRTHVPEVNALHSEAQALPPLQLGQACVNTVGLYPAS
GRQWQRRQRSETAPAPASFSTVPAATAAGQQASATTTATRESAAAVHGSASSAAGSQQAG
QGLMSPSHVLLYAVQDLWPVLDQAWLELVSTRDAVGVTSESDANTLSIVSILVDLAVCIV
QFLQAGGHSGVTAQTKEQQQQQQQQQEEEEEAMRHKHTAPGPARKRAKHQQLHRHHLTCL
DLIPTLSSLFFERFPFGGDACFHGGNNGLVLLWLNARTARMMAISWLWMHQHTASDDTTT
TSSSSSSDGSGGSGSRKRGKRGKAAKKGGDTNREFEFGGELTKFLHDAVSSAKQMQHEAV
LQHVLQTVVLLSTNCLLGAEVLDAVAKLHAAVPLDSSHKRLTFHVMAEMLRWTASLSSSK
PDDEALKAICMEWAKTLPRLAWQLNVSNTSFSHDALATIHFVIAHKLLSEKDAAATARQL
ARLVITTAKGKDFAGPFQKLPARTQHLLLDVLSLTADSAAMHDTALVAARAATLLRVDAT
VHRRLVKLAISGRHTATPFALAAARVFLDLEAGVDVAAACEDVVLDGQPRVCAPLLLTIA
QGRVKAKAAESPKAVHASVAQAVATAQLMSRLWCEARHKETPPIPHIIAQLSAAKDAAVP
VDRACGLVALATALSRIESRFDASKAPLPPAIVDCMAAVLCFHARHGLPEDRPATAVANA
NTAAAATAALQTLTTLLDMAVAVCNGDAAVLAQLLSGVAARMDAVGASKMLPLLASLCKD
ERVLDLLRQEEEEGAVVDAAARAASSLYTLLATIATTHERLSAQVRRVRQQLEQEGVAEP
TP
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggacgcggaagaaggctggcaagtccagcaaggaagttgacttcaagaagaag
aagaacaaagtgggaaagtccaagcggcaggagaacgccaccgtcaccaccttcaagacc
cgggccatccacgtgacctcgtccttacgagaagtcgatcacgcaaaggagattgtcacg
cagcaaggccagaccatcagcgatctgctggcaaaggccggccactacaacaagaacgtg
cgtgcagacgcggttcacgccatggccctgctgatcgaggatcatccagagctgctgcag
caggccgcaattttgttggcagtggtggagcgcgtgtgcccgctcatctccgacctgtcc
caccgcgtgcgcaccgaagtcgctgcgctgctcaaaatcatcgcctcctcctgtgatcag
acccaactcgttccgtacttcccactcatggtggcgcacaccagcaccgccatgaccagc
atcgaccactacacccgcgaggacgccctgaacgtcatcgacgtctggatcgaccacctc
ccggccttgctcggtgaaatgggccacaagctgctggacaactttctccacctcatctcc
tcccaatcctctggtggcagcggcggtggcagcagtagtggcggactgtcctcatcgttg
gcctcatcatcagcgatcgggtccatgcctggtggccgccagctctccggtgcgcccagc
agtgcgctcagcagcaacaaaggccgcaagtctgtcctgcagaggttgaaccgcttcacc
cagattgcactccgcacacacgtgccagaggtcaacgcactccacagcgaggcgcaggcg
ttgccacctctccagcttggccaggcgtgtgtgaacactgtcgggctatacccggcctcc
ggccgccagtggcagcggcgccagcgcagtgagactgcacctgcaccagcctccttctcc
actgtgccagcagccacagcagcgggacaacaagcatcagcgaccacaacagcaacaagg
gagagtgcggctgcggtgcacggctcagcgtcttctgctgcggggagtcagcaggctggc
cagggcctcatgtcgccatcgcacgtgctgttgtacgcggtgcaggatctgtggcccgtg
ctggaccaagcgtggctggagctcgtgtccacacgcgatgctgtcggtgtcaccagcgaa
tcagatgcaaacaccctctccatcgtctccatcctcgtggatcttgctgtgtgcattgtg
cagtttctacaggccggtggccacagtggtgtcacagcgcagacaaaggaacagcagcaa
cagcaacaacagcaacaggaggaggaagaggaggcaatgcgacacaagcacacggcacct
ggtcccgctcgcaaacgcgcgaagcaccagcagctgcaccgccatcacctgacgtgtctt
gatttgatccccacgctctcctccctcttcttcgagcggtttccctttggcggcgacgcc
tgcttccacggagggaacaatgggctggtgctgttgtggttgaatgcacgaacagctcgc
atgatggccatttcgtggctgtggatgcaccagcacacagcgagcgacgacaccaccacc
accagcagcagcagcagcagtgatggcagtggcggtagtggttcacgcaagcgcggtaag
cgcggcaaggcggcgaagaagggtggagacacgaacagggaatttgaatttggcggcgag
ctgaccaagttcctgcacgatgccgtgtcctccgcaaagcagatgcaacatgaagctgtg
ctgcaacacgtcctgcaaaccgttgttcttctctcaaccaactgcctgcttggcgcggag
gtgttggatgccgtcgccaagttgcacgccgctgtaccgctcgattcctcgcacaagcgc
ctcacgttccacgtcatggctgagatgctgcgatggacagcctccctctcgtcgagcaaa
ccagatgatgaagcactcaaggcaatctgcatggagtgggcaaagacgctgcctcgcctc
gcctggcaactcaacgtgtccaacacgtctttctcacatgacgcgctcgccaccatccac
tttgtcatcgcacacaagctgctgagcgagaaggatgcggcggcgacggcgcggcagctt
gcgcgcctcgtcatcaccaccgctaaaggaaaggactttgcaggcccgttccagaagttg
cctgcacgcactcagcacttgctactggatgtgctgtcgctgacggcggattctgctgcc
atgcacgacactgccctcgtcgccgcccgcgcagcaacgctcctgcgtgtcgacgccact
gtccaccgccgcctggtcaagcttgccatctctggccgacacacagcaacgccatttgcg
ctggccgcggcacgcgtcttccttgatctcgaagcaggggtggatgtggccgcggcttgc
gaagatgtcgtgttggacgggcagccgcgcgtgtgcgcaccgctgctgttgaccatcgcc
cagggccgcgtcaaggccaaggctgctgagagccccaaggccgtgcacgcatcggtagcg
caggcggtggcgacggcccagctgatgtctcggttgtggtgcgaggcgcggcacaaggag
acaccaccaatcccgcacatcatagcacagctctccgccgcaaaggatgcagcagttccg
gttgaccgagcgtgtggcctcgttgcgctcgcaacagcgctcagccgcattgaatcgcgg
ttcgacgcaagcaaagctcccctcccgcctgctattgtggattgcatggcagctgtgttg
tgtttccatgcacgccatgggcttccagaggacaggccggcaaccgccgtcgccaatgcc
aataccgccgcagctgctactgctgcgctccaaacgctcaccacactcctcgatatggca
gtggcggtctgcaacggggatgccgcagtattggcgcagttgctgagcggtgtagcagcg
cggatggatgccgttggggcatcgaaaatgctacctctgcttgcttccctgtgcaaggat
gagcgcgtgcttgacctgctgcgccaagaagaagaagaaggggcggtggttgatgccgct
gcccgcgccgcgtcttcgttgtacacccttctcgccaccatcgccaccacacacgagcgg
ctgtccgcacaagtgcgtcgcgtgcgacagcagttggagcaggaaggcgtggctgaacca
acaccataa
DBGET
integrated database retrieval system
