Salpingoeca rosetta: PTSG_04371
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Entry
PTSG_04371 CDS
T04136
Name
(RefSeq) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_04371
Enzymes [BR:
sre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PTSG_04371
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PTSG_04371
Prokaryotic type
PTSG_04371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
16075042
NCBI-ProteinID:
XP_004994459
UniProt:
F2U8C8
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MGLPSGGEGFLMERVRAITPTQELREGGKCVVYWMSRDQRAKDNWALLYARSLARSARVP
LVVVFSLVPKFLDATIRHYGFMLRGLHQTAKHLHEKLVPFHLLQGSAATTVPAFAAQHEA
AAVICDMSPLRVPLRWVKDVGQALEAQNVPLLQVDAHNIVPVWVTSQKQEYAARTIRPKI
HKHLDTYLQPFPELDANDKDTLGDMELPPVFDLEAQFDMLEVDTSVKEVDWIEPGYEQGM
AAAEAFGRDRAKKFDELRNNPNEDVCSNLSPYFHFGQISAAAVVLLLKSKYSKKAAKGVQ
TFIEEAVVRRELSDNFCFYNRRYDSIDGAAVWARDTLDTHRHDKREYVYTREQLEQGKTH
DDLWNAAQLQMVERGKMHGFLRMYWAKKILEWTATPEDALQTALFLNDRYELDGRDPNGY
VGCMWSIAGIHDQGWAERAVFGKIRYMNYKGCKRKFDVARFVSRFPQAVANAAEVNGQAS
SQPTLKQASSRSKRGAGGAGANTAKRAKKTSA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggggttgcctagcggcggagaagggttcttgatggagcgtgtgcgggccatcacgcca
acgcaggagctgcgcgaaggaggcaagtgcgtggtgtactggatgtcgcgtgaccagcgt
gcaaaagacaactgggccctgctgtatgcccggtccctggcgcgcagcgcaagggtgccc
ttggtcgtcgtcttcagcctggtgcccaagttcctggacgccaccatccggcactacggc
ttcatgctgcgcggcctgcatcagacagccaagcacctgcacgagaagctggtccccttt
caccttttgcaaggcagcgctgccaccacggtccctgcgtttgcggcccagcatgaggct
gcggcggtcatctgcgacatgtcgccgctcagagtacccctgcgttgggtcaaggatgtc
gggcaggcccttgaggcgcagaacgtgccactgctgcaagtggacgcgcacaacatcgtc
cccgtgtgggtcacctcccagaaacaggagtatgcagcccgcaccattcgccccaaaatc
cacaagcacctggacacgtacctgcagccttttccagagctggacgccaatgacaaggac
accctgggtgacatggagctgcctcccgtcttcgatctcgaagcccaattcgacatgctg
gaagtggacacatctgtgaaggaggtggactggattgagcctggttatgaacaaggcatg
gctgctgcggaggcatttgggcgagaccgagcaaagaagtttgacgagctgcgcaacaac
ccaaacgaggacgtgtgctcgaacctgtcgccttacttccactttgggcagattagtgca
gccgcggtggtgctgctgctgaagagcaaatactcgaagaaggccgcaaagggcgtgcag
acgtttatcgaggaggccgttgttcgcagagagctttcggacaacttctgcttctacaac
cgccgctatgactccatcgacggggcggccgtctgggctcgcgataccctcgacacacac
agacacgacaagagggagtatgtgtacacacgcgagcaactcgaacaaggcaagacgcac
gacgacctctggaacgcagctcagctccagatggttgagcgaggcaagatgcacgggttt
ctgcgcatgtactgggcgaagaagatcctggagtggacagcaacgcccgaggacgcgctg
cagacagcgctctttctcaacgacagatacgagctcgatggccgcgacccaaacggctac
gtggggtgcatgtggtccattgctggtatccacgaccagggctgggcagagcgcgccgtg
tttggcaaaatcaggtacatgaactacaagggatgcaagcgcaagttcgatgtcgctcgc
ttcgtttcccgcttcccacaggcggttgcaaacgctgcggaagtcaatggacaagcatcg
tcgcagccgacactcaagcaggcatcgagtcgcagcaagcgcggagctggtggtgctggt
gccaacacagcaaaacgcgccaagaagacatcagcgtga
DBGET
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