KEGG   Salpingoeca rosetta: PTSG_04428
Entry
PTSG_04428        CDS       T04136                                 
Name
(RefSeq) nuclear export factor CRM1
  KO
K14290  exportin-1
Organism
sre  Salpingoeca rosetta
Pathway
sre03008  Ribosome biogenesis in eukaryotes
sre03013  Nucleocytoplasmic transport
sre03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PTSG_04428
   03008 Ribosome biogenesis in eukaryotes
    PTSG_04428
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    PTSG_04428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_04428
   03009 Ribosome biogenesis [BR:sre03009]
    PTSG_04428
   03016 Transfer RNA biogenesis [BR:sre03016]
    PTSG_04428
   03036 Chromosome and associated proteins [BR:sre03036]
    PTSG_04428
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     PTSG_04428
Ribosome biogenesis [BR:sre03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    PTSG_04428
  Pre-60S particles
    PTSG_04428
Transfer RNA biogenesis [BR:sre03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    PTSG_04428
Chromosome and associated proteins [BR:sre03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     PTSG_04428
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 IBN_N CRM1_repeat BIG2_C
Other DBs
NCBI-GeneID: 16075104
NCBI-ProteinID: XP_004994522
UniProt: F2U8J1
LinkDB
Position
Unknown
AA seq 1083 aa
MSLTEEQAAQLLDFEQASIDVSVLDTIVRFFYESRPGCPEQKMAEQIMKQFQEHPDAWMR
ASQILQESQYPSTKYFALNILKDVIRTKWKLLPEEQTEGIRNFIVSMTIEASKDFESLQE
NRVLLSKLNAVLVQILKQQWPQQWPSFITDIVGASRTSEPLCQNNLEILKLLSEEIFDYS
KGQIVQVKAQHLKDALCQEFGPIYELCEFVLENAGEPTLINQALQTMLRFLSWIPIGYVF
ETNLINLLVTRFLNVPIFRNSTLECLAEIAALPGDAVADIPMDDLQSIQAKQLQLLQGAL
KQLVEMLPPSTDVAGMWHTASMEEQGFIRMLALFLTSWLKQHGQLLEADPSLRETHDICM
NYALMISTVADKELFKIMLEYWSTLAGSLYSEATACGTGMFTPNHEPKYRYDLYHDLLST
VRSVIISQMPKPEEVLIVEVDGEPVREFAKDTDTIELYKAVRITLVYLTHLDPYDTNRIM
RDMLARIVDGSQYSWHNLNTLCWAIGSISGTMSVDDEKKFLVQVIRELLGLCEARRGKNH
KAVIAANIMYVVGQYPRFLRMHWKFLKTVVNKLFEFMHEEHDGVQDMACDTFIKIATKCK
QMFVMQQLGETKPFVIEIIDNMGRTTQDLTQQQIQTFFKAVGHMISAQTDPEQQTALVQH
LMALPNSMWSRTMQAVQEQPDQLMDQATLKQLVHFFRCNYAVASTVSAAFMVQLQHIFND
SMLLYRTMSQHISSAIAQSGESVTKQPLVRTMRAVRRDILRVLEVLYQRADTSQEELEAL
TPTLLEHVLSDYSETVPQSRESTVLSVVAECVSRLGQSLLPAMGDIFQHLFEPTVDMIKE
DFETFPEFRRPFFAWLGAVVNCTTDVFSDLSPEQFKTVLDAIIWGCRHPQRDVAECSLKV
LRNLMTAAGSATFKQLFFQNFFLEVLQQILLIATDPQYAANMVQHTALLSQMFFLVENGT
IDVPLQEGQTSANVDVVRSFVGSLLKENFPHFADEQVSVIVDGFFAYDQSPGEFKNHLRD
LIVQAKEMASGDLGDLFLTERADQLKEAQERKMKRLAAIPGMLNPHSDVSKDKNGIMSPG
FSS
NT seq 3252 nt   +upstreamnt  +downstreamnt
atgtcgctgacagaggagcaggccgcgcagctgctcgactttgagcaggcgagcatcgac
gtctcggtgctggacaccattgtgcgcttcttctacgagtccaggcccgggtgcccagag
cagaagatggccgaacagattatgaagcagttccaggagcaccccgacgcgtggatgcgg
gcctctcagatcctgcaagaatcacagtacccgagcaccaagtactttgctctcaacatc
ctcaaggacgtgattcggacgaagtggaaactgcttccagaggaacaaacagagggcatc
cgcaacttcatcgtgtccatgaccattgaggcttccaaggactttgagagcttgcaagag
aaccgagtgctcctctccaagctcaacgcagtcctcgtgcagattctgaagcagcagtgg
ccgcagcaatggccgtccttcatcacagatattgtcggcgcatcccgcaccagcgaaccc
ctttgccaaaataacctggagattctcaagctcctgagcgaggagattttcgactactcc
aaaggtcagattgtgcaggtgaaggcgcaacatctcaaggacgcgctgtgccaggagttt
gggcccatttatgagctgtgtgaatttgttctcgaaaatgccggcgagccaaccctcatc
aaccaagccttgcagacgatgttgcggttcctgagctggatccccattggctacgtcttt
gagacaaacctcatcaacctgctcgtcacgcggtttttgaatgtgcccattttccgcaac
tcgacgctggaatgcctggctgaaattgctgcgcttcctggtgacgctgttgcggacatt
cccatggacgacctgcaaagcatccaggccaagcagctgcagctgctgcagggcgccctc
aagcaacttgtcgagatgctgccgccttcgacggatgtggctggcatgtggcacacggcg
tcaatggaggagcaaggctttattcgcatgctcgccctgtttctcacgtcgtggctgaag
cagcatgggcaactgctggaggccgacccatcccttcgtgagacgcatgacatctgcatg
aactacgccctcatgatctccaccgtcgcagacaaggagctcttcaagattatgctcgag
tactggtccaccctcgcaggcagcctctactctgaagcgactgcttgcggcacgggcatg
ttcaccccgaaccacgagcccaagtaccgctacgacctctaccatgaccttctgtcaacg
gtgcggagcgtcatcatcagccagatgcccaagccagaggaggtcttgattgtggaggtg
gacggtgagcccgttcgcgagtttgccaaggacaccgacaccattgagctctacaaggcc
gtccgcatcacccttgtgtatctgacgcatcttgatccgtacgacacgaaccgcatcatg
cgggacatgctcgcacggatcgttgacggctcgcagtactcttggcacaacctcaacacg
ttgtgctgggccattggctccatcagcggcacgatgagcgtggacgatgagaagaagttt
ttggtgcaggtgattcgcgagctgcttggtctgtgcgaggcgcgccgtggcaagaaccac
aaggccgtcattgccgccaacatcatgtacgtcgttggccagtacccgcgcttcctcagg
atgcactggaagttcctcaagacggtcgtcaacaagctcttcgaattcatgcacgaggaa
cacgatggcgtgcaggacatggcgtgcgacacgttcatcaagattgcgaccaagtgcaag
cagatgtttgtgatgcaacagctgggcgagaccaagccgtttgttattgagattatcgac
aacatgggccgcacgacgcaggacctgacgcagcagcagattcagacttttttcaaggcg
gttggccacatgatctctgcacagacagacccggagcagcagactgcccttgtgcagcac
ctcatggctctgccaaactccatgtggtcccgtaccatgcaggccgtgcaggagcaaccc
gaccagctgatggatcaggcgacgctgaagcagcttgtgcactttttccgctgcaactat
gcggttgcctcgaccgtgagcgcggcgttcatggtgcagctgcagcacatcttcaacgac
tcgatgctcctctaccgcaccatgtcccagcacatatcctcggccatcgcccaaagcggg
gagagcgtgacgaagcagccgcttgtgcggacgatgcgggctgttcgccgcgacattttg
cgcgtgcttgaggtgctgtaccagcgcgcggacacatcgcaggaggagctggaggcgctg
acacccacgctgctggagcacgtgctcagcgactacagcgaaaccgtgccccagagcaga
gagagcaccgtcctcagtgtggttgcggagtgcgtttcgcgcctgggccagagcctcctc
ccagcgatgggcgacatcttccagcacttgtttgagccaaccgtcgacatgatcaaggag
gactttgagacgttccccgaatttaggaggccgttctttgcgtggctgggtgctgtggtc
aactgcacgacggatgtgttttcggacctgtcaccggagcagtttaagacggtacttgac
gccatcatctggggctgccgtcatccccaacgcgacgtcgcagagtgctcgctgaaggtg
ctccggaacctgatgacggcggcgggtagcgccacgttcaagcagctcttcttccagaac
ttcttccttgaggtgctccagcagattctcctcatcgccacagacccccaatacgcagca
aatatggtgcagcatacggcgctgctgtcgcagatgttcttcttggtcgagaacggcacc
atcgatgtgcctttgcaagagggccagacgtcggcaaatgtggacgtcgtgcgctcgttt
gttggctcgctgctcaaggagaacttccctcactttgccgacgaacaagtgtctgtgatt
gttgacggcttctttgcgtatgaccagagccccggcgagttcaagaaccacctgcgcgac
ctcattgtccaggccaaggaaatggccagcggtgatttgggcgaccttttcctcacggag
cgcgccgaccagctcaaggaggcacaagagcgcaagatgaagcggcttgcagccattccc
ggcatgctcaacccgcactccgatgtcagcaaggacaagaacggtattatgtcccccggc
ttttcttcatag

DBGET integrated database retrieval system