Salpingoeca rosetta: PTSG_04428
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Entry
PTSG_04428 CDS
T04136
Name
(RefSeq) nuclear export factor CRM1
KO
K14290
exportin-1
Organism
sre
Salpingoeca rosetta
Pathway
sre03008
Ribosome biogenesis in eukaryotes
sre03013
Nucleocytoplasmic transport
sre03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_04428
03008 Ribosome biogenesis in eukaryotes
PTSG_04428
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PTSG_04428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_04428
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_04428
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_04428
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_04428
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PTSG_04428
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PTSG_04428
Pre-60S particles
PTSG_04428
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PTSG_04428
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
PTSG_04428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
BIG2_C
Motif
Other DBs
NCBI-GeneID:
16075104
NCBI-ProteinID:
XP_004994522
UniProt:
F2U8J1
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MSLTEEQAAQLLDFEQASIDVSVLDTIVRFFYESRPGCPEQKMAEQIMKQFQEHPDAWMR
ASQILQESQYPSTKYFALNILKDVIRTKWKLLPEEQTEGIRNFIVSMTIEASKDFESLQE
NRVLLSKLNAVLVQILKQQWPQQWPSFITDIVGASRTSEPLCQNNLEILKLLSEEIFDYS
KGQIVQVKAQHLKDALCQEFGPIYELCEFVLENAGEPTLINQALQTMLRFLSWIPIGYVF
ETNLINLLVTRFLNVPIFRNSTLECLAEIAALPGDAVADIPMDDLQSIQAKQLQLLQGAL
KQLVEMLPPSTDVAGMWHTASMEEQGFIRMLALFLTSWLKQHGQLLEADPSLRETHDICM
NYALMISTVADKELFKIMLEYWSTLAGSLYSEATACGTGMFTPNHEPKYRYDLYHDLLST
VRSVIISQMPKPEEVLIVEVDGEPVREFAKDTDTIELYKAVRITLVYLTHLDPYDTNRIM
RDMLARIVDGSQYSWHNLNTLCWAIGSISGTMSVDDEKKFLVQVIRELLGLCEARRGKNH
KAVIAANIMYVVGQYPRFLRMHWKFLKTVVNKLFEFMHEEHDGVQDMACDTFIKIATKCK
QMFVMQQLGETKPFVIEIIDNMGRTTQDLTQQQIQTFFKAVGHMISAQTDPEQQTALVQH
LMALPNSMWSRTMQAVQEQPDQLMDQATLKQLVHFFRCNYAVASTVSAAFMVQLQHIFND
SMLLYRTMSQHISSAIAQSGESVTKQPLVRTMRAVRRDILRVLEVLYQRADTSQEELEAL
TPTLLEHVLSDYSETVPQSRESTVLSVVAECVSRLGQSLLPAMGDIFQHLFEPTVDMIKE
DFETFPEFRRPFFAWLGAVVNCTTDVFSDLSPEQFKTVLDAIIWGCRHPQRDVAECSLKV
LRNLMTAAGSATFKQLFFQNFFLEVLQQILLIATDPQYAANMVQHTALLSQMFFLVENGT
IDVPLQEGQTSANVDVVRSFVGSLLKENFPHFADEQVSVIVDGFFAYDQSPGEFKNHLRD
LIVQAKEMASGDLGDLFLTERADQLKEAQERKMKRLAAIPGMLNPHSDVSKDKNGIMSPG
FSS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacagaggagcaggccgcgcagctgctcgactttgagcaggcgagcatcgac
gtctcggtgctggacaccattgtgcgcttcttctacgagtccaggcccgggtgcccagag
cagaagatggccgaacagattatgaagcagttccaggagcaccccgacgcgtggatgcgg
gcctctcagatcctgcaagaatcacagtacccgagcaccaagtactttgctctcaacatc
ctcaaggacgtgattcggacgaagtggaaactgcttccagaggaacaaacagagggcatc
cgcaacttcatcgtgtccatgaccattgaggcttccaaggactttgagagcttgcaagag
aaccgagtgctcctctccaagctcaacgcagtcctcgtgcagattctgaagcagcagtgg
ccgcagcaatggccgtccttcatcacagatattgtcggcgcatcccgcaccagcgaaccc
ctttgccaaaataacctggagattctcaagctcctgagcgaggagattttcgactactcc
aaaggtcagattgtgcaggtgaaggcgcaacatctcaaggacgcgctgtgccaggagttt
gggcccatttatgagctgtgtgaatttgttctcgaaaatgccggcgagccaaccctcatc
aaccaagccttgcagacgatgttgcggttcctgagctggatccccattggctacgtcttt
gagacaaacctcatcaacctgctcgtcacgcggtttttgaatgtgcccattttccgcaac
tcgacgctggaatgcctggctgaaattgctgcgcttcctggtgacgctgttgcggacatt
cccatggacgacctgcaaagcatccaggccaagcagctgcagctgctgcagggcgccctc
aagcaacttgtcgagatgctgccgccttcgacggatgtggctggcatgtggcacacggcg
tcaatggaggagcaaggctttattcgcatgctcgccctgtttctcacgtcgtggctgaag
cagcatgggcaactgctggaggccgacccatcccttcgtgagacgcatgacatctgcatg
aactacgccctcatgatctccaccgtcgcagacaaggagctcttcaagattatgctcgag
tactggtccaccctcgcaggcagcctctactctgaagcgactgcttgcggcacgggcatg
ttcaccccgaaccacgagcccaagtaccgctacgacctctaccatgaccttctgtcaacg
gtgcggagcgtcatcatcagccagatgcccaagccagaggaggtcttgattgtggaggtg
gacggtgagcccgttcgcgagtttgccaaggacaccgacaccattgagctctacaaggcc
gtccgcatcacccttgtgtatctgacgcatcttgatccgtacgacacgaaccgcatcatg
cgggacatgctcgcacggatcgttgacggctcgcagtactcttggcacaacctcaacacg
ttgtgctgggccattggctccatcagcggcacgatgagcgtggacgatgagaagaagttt
ttggtgcaggtgattcgcgagctgcttggtctgtgcgaggcgcgccgtggcaagaaccac
aaggccgtcattgccgccaacatcatgtacgtcgttggccagtacccgcgcttcctcagg
atgcactggaagttcctcaagacggtcgtcaacaagctcttcgaattcatgcacgaggaa
cacgatggcgtgcaggacatggcgtgcgacacgttcatcaagattgcgaccaagtgcaag
cagatgtttgtgatgcaacagctgggcgagaccaagccgtttgttattgagattatcgac
aacatgggccgcacgacgcaggacctgacgcagcagcagattcagacttttttcaaggcg
gttggccacatgatctctgcacagacagacccggagcagcagactgcccttgtgcagcac
ctcatggctctgccaaactccatgtggtcccgtaccatgcaggccgtgcaggagcaaccc
gaccagctgatggatcaggcgacgctgaagcagcttgtgcactttttccgctgcaactat
gcggttgcctcgaccgtgagcgcggcgttcatggtgcagctgcagcacatcttcaacgac
tcgatgctcctctaccgcaccatgtcccagcacatatcctcggccatcgcccaaagcggg
gagagcgtgacgaagcagccgcttgtgcggacgatgcgggctgttcgccgcgacattttg
cgcgtgcttgaggtgctgtaccagcgcgcggacacatcgcaggaggagctggaggcgctg
acacccacgctgctggagcacgtgctcagcgactacagcgaaaccgtgccccagagcaga
gagagcaccgtcctcagtgtggttgcggagtgcgtttcgcgcctgggccagagcctcctc
ccagcgatgggcgacatcttccagcacttgtttgagccaaccgtcgacatgatcaaggag
gactttgagacgttccccgaatttaggaggccgttctttgcgtggctgggtgctgtggtc
aactgcacgacggatgtgttttcggacctgtcaccggagcagtttaagacggtacttgac
gccatcatctggggctgccgtcatccccaacgcgacgtcgcagagtgctcgctgaaggtg
ctccggaacctgatgacggcggcgggtagcgccacgttcaagcagctcttcttccagaac
ttcttccttgaggtgctccagcagattctcctcatcgccacagacccccaatacgcagca
aatatggtgcagcatacggcgctgctgtcgcagatgttcttcttggtcgagaacggcacc
atcgatgtgcctttgcaagagggccagacgtcggcaaatgtggacgtcgtgcgctcgttt
gttggctcgctgctcaaggagaacttccctcactttgccgacgaacaagtgtctgtgatt
gttgacggcttctttgcgtatgaccagagccccggcgagttcaagaaccacctgcgcgac
ctcattgtccaggccaaggaaatggccagcggtgatttgggcgaccttttcctcacggag
cgcgccgaccagctcaaggaggcacaagagcgcaagatgaagcggcttgcagccattccc
ggcatgctcaacccgcactccgatgtcagcaaggacaagaacggtattatgtcccccggc
ttttcttcatag
DBGET
integrated database retrieval system