Salpingoeca rosetta: PTSG_04440
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Entry
PTSG_04440 CDS
T04136
Name
(RefSeq) cell differentiation protein rcd1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sre
Salpingoeca rosetta
Pathway
sre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTSG_04440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_04440
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PTSG_04440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
16075115
NCBI-ProteinID:
XP_004994534
UniProt:
F2U8K3
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MPYQKRGGGRGGGDGRQQQQKQDSQHLGDGFDQGPGPHGGHGGGGRSGGHLSEQALITLI
QDIQDLRKREDAMATLSKHRDSVKKLAVLLWHSFGIIPILVDEVISVYEHLCPEEGLQCT
ASSPRDPHSCSAPPPVPRPAAFSLPSPMVHALAQSPSGRLLKHVVRCYHRLSDNPRARDA
LRSCLPDKLRDGTIENTLRSQKDEQTLAFLQKLLVNLGLASPSTVPALPTQQQQAQ
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgccataccaaaagcgtggcggtggccgtggaggcggggatggaaggcagcaacagcag
aagcaggattcacagcacctcggagatggcttcgaccagggacccggcccgcatggcggg
cacggcggcggtggccgatctggtggccacttgagcgagcaagcgctaatcacgctcatt
caagacatccaagacttgcgcaagcgcgaagacgccatggccaccttgagcaaacaccgc
gactctgtgaagaagcttgcggtgctgctgtggcactcgtttggcattattcccatcctg
gtggacgaagtcatctctgtgtacgagcacctgtgccccgaagaagggttgcagtgcacc
gcctccagtccccgagacccgcactcctgcagtgcaccgcctccagtcccgagacccgcg
gccttttccttgccgagcccgatggtgcacgcgttggcacagagcccctctggtcgcctc
ctcaagcacgttgtccgctgctaccaccgcctctcagacaacccaagggcgcgggatgcg
ctgcgctcgtgtctgcccgacaagctcagggacgggaccatcgagaacacactcaggtcc
cagaaggatgagcagacgctggcttttctgcagaagttgcttgtgaaccttgggcttgcc
agcccctcaacggtgcccgccctcccaacgcagcagcaacaggcccagtag
DBGET
integrated database retrieval system
