Salpingoeca rosetta: PTSG_04704
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Entry
PTSG_04704 CDS
T04136
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sre
Salpingoeca rosetta
Pathway
sre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTSG_04704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_04704
Spliceosome [BR:
sre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
PTSG_04704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
16074599
NCBI-ProteinID:
XP_004994026
UniProt:
F2U9G8
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSSRKVKKEEEEAPDVADATDTDLPPTKKARIGQQSAGEEESSKRVPKKEEEVDDDGDED
EEAFGRRARRARRQDGTDDRSRRCPYLDTINRNMLDFDFEKLCSVTMSNQNVYACLVCGK
YYQGRGPGTHAYTHSLEEGHHVFINLHTLKFYCLPDNYEVIDSALDDIKFVLYPVYSKDY
IAKMDEIGKYSRALDGTRYLPGVVGLNNIKANDYVNVVVQTLNRVAPFRNFFLDTTNTRR
IRDRLVQTMGDLIRKVNNPKAFKGHVSPHEFLQAITTSSKKQFRITEQSDPIRLLSWLLN
TLDAKLSKHGHTVISDTFKGKMLVTSRKLPPTQDMQEVANIRIDPNAEEYKPKTTEIEYM
FLGLDLPPAPLFHDELQQNVIPQVALFELLNKFDGVSSHEYKTYKDTVMKTFRLKTLPKY
LIMHIKRFTKNTFFVEKNPTIVNFPVKNVDLSDYIAEEDKESGDSYQFDLLANIVHDGLP
GPGKGTYRAHVHHKGSKKWFEIQDLHVVDMLPEMITLSESYIQVWERSPTPVEAPVKAMD
MMKEEEVAGQAPASSTA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgcaaggtgaagaaggaggaggaagaggcgcccgacgtggccgacgccaca
gatacagaccttcctccaacgaagaaggcccgcatagggcagcaaagcgcaggcgaggaa
gagtccagcaaacgtgtgcctaagaaagaagaagaggtggatgacgatggcgacgaggac
gaggaggcgtttgggcgtagggcccgccgagcacgccgtcaggacggaacagacgaccgc
tcacgccgctgtccatacctcgataccatcaacagaaacatgctggactttgacttcgag
aagctgtgctccgtcaccatgagcaaccagaacgtgtacgcctgccttgtgtgcggcaag
tactatcagggacgcggtccaggaacgcatgcgtacacgcacagcctcgaagaaggccac
cacgtgttcatcaacctgcacactctcaagttctactgcttgcccgacaactatgaagtc
attgacagcgctctggatgacatcaagtttgtgctgtaccccgtgtactccaaggactac
attgcgaagatggacgagattggcaaatactctcgcgccctcgatggcaccagatacctg
ccaggcgtggttggtttgaacaacatcaaagccaacgattacgtcaacgtcgttgtgcag
acgctgaaccgcgttgctccgtttcgcaacttcttcctcgacaccaccaacactcgccgc
attcgcgaccgcctcgtccaaacaatgggtgatctgatccgcaaagtgaacaacccgaaa
gcattcaagggtcacgtgtcgccacacgagtttcttcaggccatcacaacatccagcaag
aagcaatttcgcatcacagaacagagcgatcccattcgcctgctgtcctggctcctcaac
acactcgacgccaaactcagcaagcacggacacaccgtcatcagcgacactttcaagggc
aagatgctggtgacgtcacggaagctgccgcccacacaggacatgcaggaggtggccaac
atccgcatcgacccaaacgcagaagagtacaaaccaaagacgaccgagattgagtacatg
tttctcggcctcgatctcccgccagcgccgctcttccacgacgaattgcagcagaacgtc
attccacaggttgcgctgtttgagctgctgaacaagtttgacggcgtgtcttcgcacgag
tacaagacgtacaaggacacggtcatgaagacatttcggctgaagacgctgcccaagtac
ctcatcatgcacatcaaacgcttcacaaagaacactttctttgttgagaagaatccaacc
attgtcaacttccccgtcaagaacgttgacttgagcgattacattgcggaggaggacaaa
gagtccggtgactcgtaccagtttgatcttctcgccaacattgtgcacgatggcctgccc
ggtccgggcaagggaacataccgcgcgcacgtccatcacaagggttccaagaagtggttt
gagatccaagacctgcacgtggtggacatgcttccggagatgattacgctctcggagtcg
tacattcaggtgtgggagcgctcgcccacgcctgtggaggccccagtcaaggccatggat
atgatgaaggaggaagaggttgcgggtcaggctccggcatcatcaacagcatga
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