KEGG   Salpingoeca rosetta: PTSG_04736
Entry
PTSG_04736        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K12195  charged multivesicular body protein 6
Organism
sre  Salpingoeca rosetta
Pathway
sre03250  Viral life cycle - HIV-1
sre04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    PTSG_04736
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PTSG_04736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sre04131]
    PTSG_04736
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sre04147]
    PTSG_04736
Membrane trafficking [BR:sre04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    PTSG_04736
Exosome [BR:sre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PTSG_04736
  Exosomal proteins of other body fluids (saliva and urine)
   PTSG_04736
SSDB
Motif
Pfam: Snf7 USP47_C PMSR DUF2800
Other DBs
NCBI-GeneID: 16074635
NCBI-ProteinID: XP_004994057
UniProt: F2U9J9
LinkDB
Position
Unknown
AA seq 273 aa
MGGLLSLFKGENHHGNSNNNNNSNASGGGGGGQASKITEQDRAQLKLKQQRDRVKQYRKK
IVIMIDKEKQQAKTFIKAGEKSKALLILKKKKYQEKLLENTLTQIENLEHMISQIEFAEV
EVKVLDGLKQGNQALEALKKELSVEDVEEVMADAQELQQWANDISEIAGTPLDDLDDDEL
FAEFQTELGVPATETQAKTATKTKTKTPATTATAETAAAMVDMDVPAVPGGGDEDELPDL
PDVPADEPLDLPDVPQHEPEQRRKEEEPELVPA
NT seq 822 nt   +upstreamnt  +downstreamnt
atgggtgggctcttgagcttgttcaaaggagaaaaccaccatggcaacagcaacaacaac
aacaacagcaacgccagcggtggtggcggtggtggacaggcctcaaagatcacggaacag
gatcgcgctcaactgaaattgaagcagcaacgggaccgtgtgaagcaatacaggaagaag
attgtcatcatgattgacaaggagaagcagcaagcgaaaacattcatcaaggccggcgag
aaatcgaaagcgctgctcattctgaagaagaagaagtaccaagaaaagctgcttgagaac
acactcacacaaattgaaaacctcgaacacatgatctcgcaaattgagtttgcggaggtg
gaagtgaaggtgcttgatggcctgaagcaaggcaaccaggcgctggaagcgctgaagaaa
gagctctccgtcgaggatgtggaggaggtcatggcagacgcacaggaactgcagcaatgg
gcaaatgacattagcgagattgcgggcactccgctcgacgaccttgacgatgatgagctc
tttgcagagttccaaacagagcttggcgtccctgccacagagacgcaagccaagacagcc
accaagaccaagaccaagacacctgcgacgacggcaacagcggagacggctgctgcaatg
gtggatatggacgtgcctgcggtgcctggtggtggcgacgaggatgaactgccagatttg
ccagatgttcccgccgatgaacccctcgacctcccagacgtcccacagcacgagccagaa
caacgacggaaggaagaagagccggagcttgtgcctgcgtga

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