Salpingoeca rosetta: PTSG_04972
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Entry
PTSG_04972 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sre01009
]
PTSG_04972
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sre04131
]
PTSG_04972
Protein phosphatases and associated proteins [BR:
sre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PTSG_04972
Membrane trafficking [BR:
sre04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
PTSG_04972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
UPF0184
AcMNPV_Ac75
Motif
Other DBs
NCBI-GeneID:
16074869
NCBI-ProteinID:
XP_004994290
UniProt:
F2U956
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MSDSSVPPSPGFLIKRRSRDAVRSQRRRSLLHQFPHSLPSALNDPRKGRQVDLFTRDWGD
SFVPTRTKITFPHTKREFHPQTKASRKHHVASTTAPSSVASSPGIPRPTFSEDDSEAEAP
LRKPRLPDVPSMFLNAEFDLRDKDTFDAVILGGTQRTRDLRANTRLRQEKLSNHLDSVEM
QLSIELAQRAQRIFAAMSSHEELGEKVAVASRAVHQFRTRLDATKQHVKHAYIRMLRLLI
QRQNYSNVLATLSTVATVSRTQSTIQYMLASGEYNKALDLIQTTQEVVATDLKGVHAVRH
LAHQLAEIKTLIAKMVDGDLVQVLVDAVKSVVPPLFAGESEGTHDGAVPSLTPLPPEYNN
DNEDEGEEDEEGARVDALLQTIRPLVGAIARQQQSQVLATYETQLLTFLRGLVKDLVVDF
LRCCPEKAVRKTVDPTQIASWGDSLRLLSFDSWMVLLDRTTCVFLRILRHIVCNHDALAI
ALRELSPQPFSMPPSGPPSPTKTRTDSSGSGGGDGDGNHGDSCGGGGGGGGGGDDDDDDH
AQPAVSHEKSDSATAEGGDGSSNGGDGGGHGDDDEFDDEFVSDTLANTMDATMAELVDVD
VQRKSGSRSKRASGQQHSSNGGGNGGGGGDSRTQARRSRQDSTGRGDNDGDSNGNGDSGG
SGGGAVLSGAQYDRLVEANRRIVRRAVEEIHTRLAKVFQARLRDGIDAKLGATAFITYYN
KVWAFLTQSEALSGLHTNTLRNTLSSQTRAFASKFHAREMEKLQAMLQTESWSMAQVPLE
CQRLYSQLLHPTDTAKQEDKQRQQHVATNGDHPSSSSSSTARKKLDVDGEEHAAIGALLL
FIKMLAEYCRCLDAMPLAASDLLRKLFEILRSFNSQVRRLILQAEAMRTLGLKRITAKHI
ALSAEAIAVILAVLPSIKQRSAKLVRDRSKSMLSEFNSVQDEYARHQHDLLSKLTVIMED
VWSACEQDMAWQKAAVTNGCKTFTSSAQKLHKALLPILPPATLQVVFANVMRMLNEKLTA
VCKKHDTEKDKPAFVGVAADVLHMEKHLGTLSSMPIFLLRQGLSEAGVVLPPLVDTIAQD
A
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcgtctgtgccgccctcgcctgggttcttgataaagcgacggtccagggat
gcggtgcggtcgcagcgccgacgctcgctcctgcaccagttcccgcactcgctgccctct
gcactgaacgacccgcgcaagggcagacaggtggacctgttcacccgcgactggggcgac
agcttcgtgcccacccgcaccaaaatcacctttcctcacacgaaacgagagtttcaccca
caaacaaaggcgtcccgcaagcaccatgtcgcgagcacgacggcgccgtcctccgtcgca
tcatcgccggggattcccaggcccacgttttccgaggacgactctgaagccgaggcaccc
ttgcgcaaacccagactgccagatgtgccatcgatgtttctcaacgccgagtttgacttg
agggacaaggacacgtttgacgcggttatactgggaggaacccagcgcactcgcgacctg
cgcgccaacaccagactgcggcaggagaagctttcgaaccatctcgactctgtggagatg
cagttgtctatcgagttggcgcaacgagcgcagcgcatcttcgccgccatgtcgtcccac
gaggagctcggggagaaggtggcggttgcgagcagggcggtgcaccagttccgcacgcgc
ctcgacgccaccaaacaacatgtcaaacacgcttacatccgcatgctgcggctgctgata
cagcggcaaaactacagcaacgtgcttgccactctcagcacggtggcaacggtgtcgcgc
acacagagcaccatccaatacatgctggccagtggggaatacaacaaggcacttgacctc
atccaaacgacacaggaggtggtggcaacggaccttaaaggggtacacgcggtgcgccac
cttgctcaccagctggcagagatcaagacgctgattgccaagatggtggacggtgatctc
gtgcaggtcctcgtcgacgcagttaagtcggttgtgccgccgctgtttgctggggagagc
gagggcacacacgacggcgcggtgccatcgctgacgccgctaccaccagagtacaacaat
gacaacgaagatgagggcgaggaggatgaggaaggcgcgcgtgttgatgcgctgctgcag
acgatacgcccactcgttggcgccattgcacggcagcagcagagccaggtgctcgccacg
tatgaaacgcagctcctcacgtttcttcgcggtctcgtcaaggacctggtggtggatttc
ttgcggtgctgcccagagaaggcggtgcgcaagaccgtcgacccaacccagattgcatca
tggggtgactccttgcggctgctgtcctttgacagctggatggtgctgctcgaccgcaca
acgtgcgtgttcctgcgcattctccggcacattgtgtgcaaccacgacgcgcttgccatt
gctcttcgcgagctttcaccgcagcccttcagcatgccgccctcgggcccgccttcgccc
accaagacacgaacagacagcagtggcagcggtggtggtgatggtgacggtaatcatggt
gatagttgtggtggtggtggtggtggtggtggtggtggtgatgatgatgatgatgatcac
gcccaaccggcagtctctcacgagaagagtgacagtgcaactgctgaaggcggtgatggc
agcagcaatggtggcgacgggggcggtcatggcgatgatgacgagtttgacgatgagttt
gtgagcgacaccctggccaacacgatggatgcgacgatggcggagcttgtggacgtcgat
gttcaacggaagagcggcagcagaagcaagcgggccagcggtcagcagcacagtagtaat
ggcggtggaaatggtggtggcggtggtgactcgaggacacaggcacgccgcagccgacaa
gacagcaccggtcggggtgacaatgacggcgatagcaatggcaatggcgacagcggtggt
agtggtggtggtgcagtgttgagtggggcgcagtatgaccgcttggttgaggcgaaccga
cggattgtgcggcgtgcagtggaggagatacacacgcgcctggcaaaggtgttccaggcg
cgattgcgtgatggtatcgatgccaagcttggggcaaccgcatttatcacgtattacaac
aaagtgtgggcgtttctgacgcaatcggaggcgctgtctggtttgcacaccaacactctt
cgcaacactctcagctcccagacgcgtgcattcgcgagcaaattccacgcgcgggagatg
gagaagctacaggccatgctgcagacggaatcctggtcaatggcgcaagtgcctctggaa
tgtcagcggctgtattcgcaactgctgcatccaactgacaccgcaaagcaagaggacaaa
caacggcaacaacacgtcgccacgaatggcgaccacccatcatcatcctcatcatcgaca
gcgaggaagaaattggacgtggacggagaagaacacgcagccatcggcgcgcttctgctg
ttcatcaagatgttggcggagtactgccgatgtctcgatgccatgccgctcgcggcctct
gatctcctcagaaaactctttgaaatcctccgctcattcaattcgcaggtacggcggctg
attttgcaagcggaggcaatgcgcacgctcgggctgaagcgaatcaccgccaagcacatt
gcgctcagcgccgaggccatcgctgtcatcctggcagtgctgccctccatcaagcagcgc
agtgcaaagctcgtcagggatcgatcgaagagcatgttgtctgagttcaacagcgtgcag
gatgagtacgcgcgacaccagcatgatctcctcagcaaactcaccgtcatcatggaggac
gtgtggtctgcatgcgaacaggacatggcgtggcagaaggcggccgtcaccaacggctgc
aagacattcacttcgtcggcacagaaactgcacaaggccctgctgcccatcttgccccca
gcaacgctacaggtcgtgtttgcgaatgtgatgcgcatgctgaatgagaagctgacggct
gtctgcaagaagcatgatacagaaaaagacaagccagcgtttgtcggcgtggctgcagat
gtgctacacatggagaagcatctgggaacgttgtcatccatgcccatcttcttgttacgc
cagggcctgtcagaggcgggcgtggtgctacctccgcttgtcgacaccatcgctcaggat
gcttga
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integrated database retrieval system
