Salpingoeca rosetta: PTSG_04979
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Entry
PTSG_04979 CDS
T04136
Name
(RefSeq) RuvB-like helicase 1
KO
K04499
RuvB-like protein 1 [EC:
5.6.2.4
]
Organism
sre
Salpingoeca rosetta
Pathway
sre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PTSG_04979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sre03036
]
PTSG_04979
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sre03037
]
PTSG_04979
Enzymes [BR:
sre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PTSG_04979
Chromosome and associated proteins [BR:
sre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
PTSG_04979
Chromatin remodeling factors
SRCAP complex
PTSG_04979
INO80 complex
PTSG_04979
INO80 complex (yeast)
PTSG_04979
SWR1 complex
PTSG_04979
ASTRA complex
PTSG_04979
Cilium and associated proteins [BR:
sre03037
]
Motile cilia and associated proteins
Dynein assembly factors
PTSG_04979
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
RuvB_N
AAA_22
Mg_chelatase
AAA_5
AAA_16
bpMoxR
AAA_19
AAA_25
AAA_18
AAA_28
Parvo_NS1
AAA_7
nSTAND3
DEAD
IstB_IS21
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
16074876
NCBI-ProteinID:
XP_004994297
UniProt:
F2U963
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MKIETVESATRPQRIAPHSHVKGLGIGDDGKALPVGAGLVGQDQAREAASIVVDLIKAKK
MAGRAVLFAGPPGTGKTALALAISSELGPKVPFCPMVGSEVYSAEVKPTEVLMENFRRAI
GLRIKEIKEVYEGEVTELTPEETEDTLGGYGKTISHVIIGLKTRKGTKQLRLDPTIYESL
QKEKVEVGDVIYIEANTGAVKRVGRSDTFATEFDLEAEEYVPVPSGDVHKKKEIIQDVTL
HDLDMANARPQGGQDIVSVMGTLMKPKKTEITEKLRKEINKVVNKYIDQGVAELVPGVLF
IDEVHMLNLECFTYLNRALESTLSPIVIFATNRGHCTIRGTEIQSPHGIPLDLLDRIMII
KLTPYGTEDMQQILKIRAEIEGIPIDDDSLSQLAILGTKTTLRYVVQLLTPSFLLAKING
RESVSTTEIEEINELFMDAKTSAKVLMAQTDKFLK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgagacagtcgagagtgccacgcgcccacagcgcatcgctccccacagccac
gtcaagggtcttggcattggcgacgatggcaaggcactccctgtgggagctggtctcgtt
ggccaggaccaggcgcgtgaggccgcctccattgtcgtggacctgatcaaggcaaagaag
atggctggtcgcgccgtgctgtttgctggcccacctggcaccggcaagactgcgcttgca
cttgccatcagctcagagcttggccccaaggtgccattctgcccaatggttggcagcgag
gtgtactctgccgaggtcaagcccacagaggtgttgatggagaacttccgccgcgccatt
ggtctccgcatcaaggagatcaaggaggtctacgagggcgaggtgacggaactgacaccc
gaggagacggaggacacgcttggcggttacggcaagaccatcagccacgtcatcatcggc
ctcaagacccgcaagggaacaaagcagctgcgactggacccgacgatctacgagagcctg
cagaaggagaaggttgaggtcggcgacgtgatctacattgaggcgaacacgggcgccgtc
aagcgcgtcggccgctcagacacttttgcaacagagtttgacctcgaggccgaggagtat
gtgcctgtgccgagcggggacgtgcacaagaagaaggagattatccaggacgtgacgctg
cacgacctggacatggccaacgcgcggccgcagggcgggcaggacattgtttccgtcatg
ggcaccctcatgaagccaaagaagaccgagattacagagaagctccgcaaggaaatcaac
aaggttgtgaacaagtacattgaccagggcgtggccgagctcgtgccgggcgtcctcttc
atcgacgaggtgcacatgctgaacctggagtgcttcacgtatctcaaccgggcgctggag
tcgacgctgtcgccgattgtcatcttcgccaccaaccgcggccactgcaccatccgcggg
acggagatccagtccccacacggcattccgctcgaccttctcgaccgcatcatgatcatc
aagctcacgccatacggcaccgaggacatgcagcagattctcaagatccgcgcggagatt
gagggcattccgattgacgatgactcgctctcgcagctcgccatcctcggcacgaagacc
accctcagatatgtggtgcagctgctcacgccatccttcctcctcgccaagattaacggg
cgagaatctgtgtcgacgacggagattgaggagatcaacgagctgtttatggacgccaag
acgtcggccaaggtcctcatggcgcagacagacaagttcctcaagtaa
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