Salpingoeca rosetta: PTSG_05071
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Entry
PTSG_05071 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sre03016
]
PTSG_05071
Enzymes [BR:
sre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PTSG_05071
Transfer RNA biogenesis [BR:
sre03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PTSG_05071
Prokaryotic type
PTSG_05071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
16074971
NCBI-ProteinID:
XP_004994390
UniProt:
F2U9F7
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MTEVLDGLEITSHSSAGHGTCITVTTSNPLPRLSICFDIGACLTESVQAQHVFVSHCHTD
HVGSLMLHARAREMCSGPATYYVPEPVIPHLRRMQQLFADLDSDGVPKVPPARFEPIWPG
RVVPVGKGFAVKVLAVEHRVHNAFAFVLQRRDRLPLPPEFRGLPPMEIKALYDENVVQKF
GPPKALLTYSGDCVLRSLLKHAFVLSTRVLICELTYLDDRTESKAEKYMHVHLKELVPAL
HRFRNLSHLHLVHFSTRYCAESICGHLMALPTRMQDRTSVGLMAFGESSAALRWALKRVF
YVQGPGGCAIPAVVTSTRHDHTLRALCRTLVVRDMEDQPGDCAGVSCVISVPTLNRSTAM
HIYSLGDAGKATVDGIVSGVREAGGGAPARAHGIAKGALKYVLDIERGADAHAHADEVVA
TLRSGEPLVALLAAQTAPHHQPPPHLPTKRTTTPEGPAGGHAQLSHHHSKQSKQSTPSNH
TRPPPG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggtgttggatggactggagatcacgtctcactccagcgctgggcatggaacg
tgcatcacagtcacaaccagcaacccgcttccgcgtctctccatctgctttgacattggg
gcttgcttgacagagagtgtgcaggcacaacacgtctttgtctcgcattgccacacggat
catgttgggtccctcatgctgcacgcccgagcacgtgaaatgtgctctggcccagccacc
tactatgtccccgagcccgtgattccacatctccgacgcatgcagcagctgtttgcagac
ctcgacagcgatggtgttccaaaggtgcctcccgctcgcttcgaacccatctggcccggt
cgtgttgttcccgtcggcaaaggctttgctgtcaaagtccttgctgttgagcaccgcgtc
cacaatgcatttgctttcgtcctccagcgccgtgaccgcctcccgctcccgccagagttt
cgcggtcttcccccgatggagatcaaagccctctacgacgagaatgttgtgcagaagttt
gggccaccaaaggcgcttctcacctattccggcgactgcgtgctacgatcgctcctgaaa
catgcatttgttctctcgacacgtgtcctcatctgcgagctgacctaccttgacgaccga
acagagtcaaaggctgaaaagtacatgcacgtccacttgaaagagctcgtgccagcgctc
catcgctttaggaatctgtcccatcttcacctcgtgcacttctcaacacggtactgtgct
gaatcgatttgcggacacctaatggccctaccgacaagaatgcaggaccggacgtccgtt
ggcttgatggcctttggcgagagcagtgctgccttgagatgggcgctgaaacgcgtcttc
tacgtgcagggacctggtggctgcgccatccccgccgttgtcacatccacacggcacgac
cacacacttcgcgcgctctgcagaacgttggtggtgcgggacatggaggatcagccgggc
gactgtgcgggagtgtcgtgcgtcatctctgtgcccaccctcaaccggtcaacagcgatg
cacatctactccctcggggacgcagggaaggcgactgttgacggcattgtcagcggggtc
agggaggccggcggcggtgctcctgcacgtgcacacggcattgcaaagggcgccctcaaa
tatgttcttgacattgagcgaggagcagatgcacatgcgcacgcggatgaagttgttgcc
accctgcgtagcggtgagccgctggtggcgctgcttgcggcacagacagcgccgcatcac
cagccaccgccgcacctgccgacgaagcgaacgacaacaccagaaggtccagctggagga
cacgcgcagctgtcgcaccaccactccaaacagtcaaaacagtccacgccgtcaaaccac
accaggccaccgccaggctag
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integrated database retrieval system
