Salpingoeca rosetta: PTSG_05327
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Entry
PTSG_05327 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K20176
small G protein signaling modulator 3
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sre04131
]
PTSG_05327
Membrane trafficking [BR:
sre04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
PTSG_05327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RUN
RabGAP-TBC
PDZ_6
PDZ
OmpH
RabGap-TBC_2
PDZ_2
Lig_C
Motif
Other DBs
NCBI-GeneID:
16074479
NCBI-ProteinID:
XP_004993900
UniProt:
F2UA44
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MARVLSSLRDGVLPHSCWQPSEEAESQEEHHGGVERAGESGQGDGEEQNAVVADGADWQG
EHPGRPRPRLVCVTRSKAGLGVKVAGGQPAVLVEVDHLGPAYAAGVRDQDQCLAVNGVLV
LHLSAQSLEHLFDTCEDEYIKLLVLQRSPPRPFAPLLIPRWDRPHIDAFGFDTRLDADGE
SVQADDKEDGDADGQGDDSTPHNTSSKQAEDGTDKVATQDGSLPQEEPAASNIDSSDVAR
LREWDEFLKGGRLQGAQAPHWTSTSQTHGSDEQFLTAFAGVASMELSLRIWDCFLYENVL
TLFKVSLSLVTIFAPKLTALAEDLGAFMRLLSSLPMLGSEQTDHVMQLSYAFQVVEAEVP
ALRQEYRADLQAEYDAYRKRMDSLHASRDSTDEDTAALQGSSSFWHRVLKRRASAVYLNG
LSNEEMSERMTGLGEAIQHVMVAAAEQQSDSEAVTLLVHNSLCVELARVLRAGLCVSEAK
HPWIALQAAVAAILDDHIKWQQIADDVYSEQQLRQHAATFAAAVQSIDQAHKRVENSDLN
VKLRSLICLGLNGGELHAWIRILSRAIQTNSDLRRFYSATSALRNPHFAKQIELHLQALL
RNTHFHLAVDMEWSVSNPPRKSVL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcacgggtgctgtcgagcctgcgcgacggcgtgctgccacactcctgctggcagcca
tcagaggaggcagagagccaggaggagcaccacggcggcgtggagcgtgctggcgagagt
gggcagggggatggcgaggagcaaaacgcggtggtggctgatggtgctgattggcaaggc
gagcaccccggccggccacgacccaggcttgtgtgtgtcacccggtccaaggctgggctc
ggcgtaaaggtcgccggcgggcagcccgccgtgcttgtggaggtggaccaccttggcccc
gcttacgctgctggtgttcgcgaccaggaccagtgtctggccgtcaacggcgtgctggtg
ctccacctcagtgcgcagtcacttgagcacctctttgacacctgcgaggatgagtacatc
aagctgctcgtgttgcagcgcagcccgccacgacccttcgctccgctgctcattccacgg
tgggaccggccacacattgacgcgtttgggttcgacacgcgcttggacgcagacggcgag
agcgtacaggcagacgacaaggaggacggtgatgcggatgggcaaggcgacgacagcaca
ccgcacaacacgagcagcaaacaagcagaggacggcacggacaaggttgcaacacaagac
ggaagtctgccacaagaggaaccagcagcctccaacatcgacagcagcgacgtggcaagg
ctgcgggagtgggacgagttcttgaagggtgggcgattgcagggcgcacaggctccgcac
tggacatccacgtcccagacacacggcagcgacgagcagtttctgacagcgtttgctggt
gtcgcatcgatggagctctcactccgcatctgggactgctttctctacgaaaacgttctc
acgctgttcaaggtttcgctgagcctggtcaccatcttcgctccaaagctgactgcgctt
gcggaggacctcggcgcgttcatgcgtctcctctcgtcgctgcccatgctcgggagtgag
caaaccgaccacgtcatgcagctcagctacgcgttccaagtggttgaggcggaggtgccg
gcgctgcgccaggagtaccgtgcagacctgcaggccgaatacgacgcgtacaggaagcgc
atggactcgttgcacgccagtcgtgattcaacagacgaggacaccgccgcactgcagggg
tcgtcgtcattctggcaccgggtgctcaagcgtcgagcgtcggccgtgtatctgaacggg
ctgagcaacgaggagatgagcgagcgcatgacggggcttggcgaggcaatacaacacgtc
atggtggcggccgccgagcagcagtcggattcggaggccgtcaccctcctcgtgcacaac
agcctctgcgtggagcttgcacgcgtgcttcgtgcggggctgtgcgtgtctgaggccaaa
cacccctggattgctctccaggccgcagttgccgccatcctcgacgatcacatcaaatgg
cagcaaattgctgacgatgtgtattcggagcagcagttgcggcagcacgcggccacgttt
gccgctgctgtgcagtccatcgaccaggcccacaagcgcgtcgaaaactcagacctcaac
gtgaagctgcgtagtctgatctgtcttggtctcaacggcggtgaattgcacgcgtggatc
cgcattctctcccgcgcaattcaaacgaacagcgatcttcgccgcttctacagcgccacc
agcgctctcaggaacccgcactttgcaaagcagattgaattacatctgcaagcgctgttg
cgcaacacgcacttccacctggccgttgacatggagtggagcgtgtccaaccccccacga
aagtctgtgctgtga
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