Salpingoeca rosetta: PTSG_05474
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Entry
PTSG_05474 CDS
T04136
Name
(RefSeq) uncharacterized protein
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GSDH
PKD_4
Laminin_G_3
PKD
Motif
Other DBs
NCBI-GeneID:
16073920
NCBI-ProteinID:
XP_004993343
UniProt:
F2UBB4
LinkDB
All DBs
Position
Unknown
AA seq
1532 aa
AA seq
DB search
MLQPSVLALVVLMLGMAAAIIPGAHAKRELLLHERFDMETRFSITPPTVFMSIKFFPDDS
GRFLVLDKRGTVYIGHEDDRPLQLEPYLNLDNVDFGDERGSLDIEIDPAFSTLSKQFVYV
YYSPIDPEQFRVSRFVHVEGPGHLSSKADPHSETVIWRDALGYPGKFHYGGALLFGPDQQ
YLYLTSGDKTKADWAQDIWRTTGCVFRFDRDGNPHPNNFGLTFDGKGGVEDTMFAYGLRN
GFRATWDIPDPVAAAPPPASPTNPNANATTTAAAAAATTAGSSSNSNNNNTTNTNNSSDN
NNNSSDSKSASDNTGSQQLPYAPRLLVGEVGGNNQPLSWEDIHVVENGANMGWPLCEGAC
DNPDFSMSCTCRKHANPLFSYPHAGTNAAVVLGPVYRGDEFPQQFRNNIFFADYAREEMW
RLQLNPSTGAVEEVALFAKDVGEITHITQGPDDMLWLTTSRGQIKRLTYDEGHLRPEIVT
AQASVVTGMAPMQVDFTAYAVHQQANMTLSYRWSFNDGTADEFAANVTHLFRREGEFHVQ
LRVTDSEYRTTALAKAITIAVGQAPTARIVSPVNGSTFVALDIIRVVGVGTDDNALTEDN
FSWNVRFLHDDHFHPVESGIKGRAFSFQVADTGHTYEGRTGLELELTVTDNAGLSSTTSV
AIFPKKVDVMFDTSPEGAALYVDGLPRVTPFVLDTLVGFQHPVRAPDMSCVEDTMNKFDT
WDHTPVRDWLLVVGEDEAGHSFQAHFEPAPCEGSTGIPVRDGLVMHLASDAGVYTQPDTA
RLRLWTDQVGDNNLNRIQGTPVLVRDGGPNDSPYVLFDGDGDALYRDGFVGLPLNTRDRT
LVTVVRYESPGYGGVVYGSPDCNGAFGAGVSPHTPGRLSMRGYCGRATIDANRVAQDEGW
LIHTVVLDSNHVWMYANGEAVTNKAMVMRTRGSEDDSRFVVGADIDLSSHVRMGVAHVLL
YDRALTEAELQDVHAYLVKEYLSGLDDLVRLSVPIPQHGKRYIVGYVQLDWVVTVAEDSP
SAPNPDELVVVISLNGGAAVVSSFLQSSLPLFYLPVGAHTIDIAVAPASAATPAYFFPSA
EATAVGTARAADVSSAAGGAGAAGLSSSSASSADAVGADLGTVDGIPLPSLHIEFDVALG
PYVADDTFVVERRASALLRVLDNDIALYGQPPLDVSSISIVDSPNLGTLQLTESGELVYN
NLRGSDGDVDTFSYTHLHILHHILHHNNYNYNYNYNYNYNYNYNYNHDHNYNYNHDHNYN
YNHDHNYNYNYNYNYNYNHHDDGDDHNHNQSAQDLSAATPSSVIAAPDKTVYGWLDASAG
GYVATARTPDVRFEHDASVPHLSFSGSGGLQVAGPLRGLPLDNRPRTLMAVVRYWSPAKG
AVVYGKRKCGATFGLGAAAAVARAGRWQTSTLRTVGALVPSVRTRCNDMVSGAAFGMGEW
VVQSAMVVGPTVFQTLGHDVVGVGLNTLKTGDGSLFIGQDSVSQQHPVVDIAAVVLFDRA
LNVDEYSFMVEYLRWKYLNQEPDADKVLSYLT
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagccaagtgtactggcgcttgtcgtgctcatgcttggcatggcagctgccatc
attccaggagcgcacgccaagcgagagctgctgctgcatgagcgcttcgacatggagacg
cgcttcagcatcacgccgccaaccgtgttcatgagcatcaagttcttcccagatgacagc
ggcaggttcctggtcctcgacaaacggggcaccgtctacatcggccacgaagacgacaga
ccgctacagcttgaaccatacctcaatcttgacaacgtggactttggggacgagcgtggg
tcgctggacattgagattgatccagcgttctccacccttagcaagcagtttgtctacgtc
tactacagccccatcgacccggagcagtttcgcgtgtctcggttcgtccacgtggaaggg
cctggccacctcagcagcaaggccgacccacactcagagacggtcatctggcgcgacgcg
ctggggtaccctggcaagttccactacggtggtgcgctgctctttggcccagaccagcaa
tacctctacctcacctctggcgacaagaccaaagcagattgggcacaggacatctggagg
accacgggctgcgtgtttcggttcgaccgcgacggaaacccacacccaaacaactttggc
ctcacctttgatggcaaggggggcgtggaggacaccatgtttgcctacggcctgcgaaac
ggctttcgtgccacctgggacattcccgatcccgtggcagccgctccacctcccgcatca
ccgaccaaccccaacgccaacgccaccaccaccgccgccgccgccgccgcgaccactgca
ggaagcagcagcaacagcaacaacaacaacaccaccaacaccaacaacagtagcgacaac
aacaacaacagtagcgacagcaaaagtgcaagtgataacactggcagccaacagctgcca
tatgcaccaaggttgctcgtgggtgaggttggtggcaacaatcaacccctgtcatgggag
gacatccatgtggtggagaatggggcgaacatgggctggccactgtgcgaaggagcgtgc
gacaaccccgatttcagcatgtcgtgcacgtgtcgcaagcacgcaaacccgctcttctcg
tacccgcacgctggcaccaacgcggccgtcgtgcttgggcccgtctaccgtggtgatgag
tttccgcagcagttccgcaacaacatcttctttgcagactacgcgagggaggagatgtgg
cgactgcagctcaacccaagcacgggtgccgtggaggaggtggcgctgtttgcaaaggac
gtcggggagatcacccacatcacacaggggccggacgacatgctctggctcaccacgagt
cgtggccagatcaagcgcctcacatacgacgagggccacttgcggcccgagattgttact
gcgcaggcgagcgttgtcacgggcatggcgcccatgcaagttgactttaccgcgtacgcc
gtgcaccagcaggcaaacatgacgctgtcgtaccggtggtcgttcaacgacggcacggcc
gatgagtttgctgcaaacgtcacccacctgttccgccgcgagggggagttccacgtgcag
ctgcgcgtcacggacagcgagtaccgcacgaccgccctggccaaggccatcaccatcgcc
gttggccaagcgcccactgcacgcatcgtctcccccgtcaacggctccacgtttgtggcg
ctagacatcatcagggtcgttggcgtgggcaccgacgacaatgcactcacggaggacaac
ttctcgtggaacgtcaggttcttgcacgatgaccacttccaccccgtcgagtctggtatc
aagggccgcgcgttctccttccaggtcgcagacacgggccacacgtacgaggggcgcacg
ggcctggagctcgagctcactgtcacagacaacgccggcctgtccagcaccaccagcgtg
gccatcttcccaaagaaggtggatgtcatgtttgacaccagccccgagggtgctgcgctg
tacgtggacggcctgccacgtgtcacgccctttgtcctggacacgcttgtgggcttccag
caccccgttcgcgcgcccgacatgtcttgcgtggaggacacgatgaacaagtttgatacg
tgggaccacaccccggtgcgcgactggctgctggtggtgggcgaggatgaggctgggcac
agcttccaggcgcacttcgagcccgcaccctgcgagggctccacgggcattcccgtgcga
gatggcctcgttatgcacctcgcctctgatgccggcgtgtacacacagccagacacggcc
cggctgcgcctgtggacggaccaggttggtgacaacaacctgaaccgcatccagggcacg
cccgtgcttgtgcgcgatggcgggcccaacgactccccgtacgtgctgtttgacggcgac
ggcgacgccttgtaccgggatgggtttgttggcctgccgctcaacacgcgcgaccgcacg
cttgtgacggtggtgcgctacgagtctccgggttacggtggcgtggtgtatggctcgccg
gactgcaacggcgcttttggcgcgggcgtgtcgccgcacacccctgggcgcctgtccatg
cgcggctactgcggccgggccaccattgatgccaaccgcgtggcgcaagacgagggctgg
ctcatccacaccgttgtcctggacagcaaccacgtgtggatgtatgccaacggcgaggcg
gtgacgaacaaggcaatggtgatgcgcacgcgcggaagcgaggacgacagccgctttgtg
gttggcgcggacattgacctgagtagccacgtgcgcatgggcgtggcgcatgtgctgctg
tacgaccgcgccctcacggaagccgaactgcaagacgtgcacgcgtacctggtgaaagaa
tacctgtcggggctggacgaccttgttcgcctgtctgtgcccatcccgcagcacggcaag
cgctacattgtcggctacgtgcagctcgactgggtggtgacggtggcggaggacagtccc
agcgccccaaatccagacgagctggtggtggtcatctccctcaacggcggcgctgctgtc
gtcagcagcttcttgcagagctcccttccactcttctacctgccggttggcgcgcacacg
attgacattgcggttgcgcctgcatctgcagcgacccctgcatacttttttccttcggcc
gaagccactgctgttggcacggcacgcgccgcagacgtgtcatctgcagcaggaggagca
ggggcagctggcttgtcatcgtcatcagcatcatcagcggatgctgtgggtgccgacctg
ggcacggtggacggcatccctctgccgtcgctgcacattgagtttgatgttgcacttggg
ccgtacgtggcagacgacacgtttgtagttgagcggcgggcaagcgcgctactgcgcgtt
cttgacaacgacattgcgctgtacggccagcctccgcttgacgtgagcagcatcagcatt
gtggacagcccaaacctgggcaccctgcagttgacggagagcggtgagcttgtttacaac
aacctgcgtggcagtgatggcgacgtggacacgttttcgtacacgcacctccacatcctc
caccacatcctccaccacaacaactacaactacaactacaactacaactacaactacaac
tacaactacaactacaaccacgaccacaactacaactacaaccatgaccacaactacaac
tacaaccacgaccacaactacaactacaactacaactacaactacaactacaaccatcac
gacgacggcgacgaccacaaccacaatcagagcgcccaagacctctctgcagccaccccc
tccagcgtgattgcagcgccggacaagaccgtgtacggctggctcgacgcatctgcgggc
ggatacgtggccacggcgcgaacaccagacgttcgcttcgaacacgacgccagcgtccca
cacctgtcgttctccgggtctggcgggctgcaggttgctgggccgttgcggggcctcccg
cttgataacagaccgcgcacgctgatggccgtggtgcgatactggtcaccagcaaaaggc
gctgttgtgtacggcaagcgcaagtgcggggcgacgtttgggcttggcgcggcagcggcc
gtggcccgagcagggcggtggcagactagcacgctgaggacggtgggggcgctggtgccg
tccgtgcgtacgcggtgcaacgacatggtgtcgggagcggcgtttggcatgggcgagtgg
gtggtgcagtcggcgatggtggttgggccgacggtgttccagacgcttgggcacgacgtt
gtcggtgtcggactgaacacgttgaagacgggcgatgggtcgctgttcattgggcaggat
agcgtgagtcagcaacacccggtggtggacattgcggcggtggtgctgtttgaccgggcg
ctgaacgtggacgagtattcgtttatggtggagtacctgcggtggaagtatctcaatcag
gagccagacgcagacaaggtgctgtcatatctgacatga
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