KEGG   Salpingoeca rosetta: PTSG_06010
Entry
PTSG_06010        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
sre  Salpingoeca rosetta
Pathway
sre03020  RNA polymerase
sre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PTSG_06010
  09124 Replication and repair
   03420 Nucleotide excision repair
    PTSG_06010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sre03021]
    PTSG_06010
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_06010
Transcription machinery [BR:sre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     PTSG_06010
  RNA polymerase III system
   RNA polymerase III
     PTSG_06010
  RNA polymerase I system
   RNA polymerase I
     PTSG_06010
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PTSG_06010
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 zf_Tbcl_2 DUF5816 Zn_ribbon_8 HypA Zn_ribbon_DZR_6 zf_RING-like Zn_ribbon_3 FtrD-like DUF7129
Other DBs
NCBI-GeneID: 16073475
NCBI-ProteinID: XP_004992902
UniProt: F2UDF0
LinkDB
Position
Unknown
AA seq 58 aa
MDQQQDLLPGQQVAMEYICGSCGRRTRIRQMDSLACTNCGHRILYKPRTARPVQVNCR
NT seq 177 nt   +upstreamnt  +downstreamnt
atggatcagcagcaggacctccttcctggccagcaggtggccatggagtacatttgcgga
agctgtggacgtcgcacgcgcatcaggcagatggactcccttgcatgcaccaactgcggc
caccgcatcctctacaagccccgcacagcaaggccggtgcaagtcaactgcagatga

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