Salpingoeca rosetta: PTSG_06020
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Entry
PTSG_06020 CDS
T04136
Name
(RefSeq) uncharacterized protein
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POLQ_helical
DEAD
Helicase_C
HTH_61
ResIII
HHH_5
DUF4332
Motif
Other DBs
NCBI-GeneID:
16073485
NCBI-ProteinID:
XP_004992912
UniProt:
F2UDG0
LinkDB
All DBs
Position
Unknown
AA seq
1156 aa
AA seq
DB search
MSGAMMTRASARGGAGPATKRAHVMPGASSHSVASVAASSTHTTDSEEALQAEVDDIMLS
LAADEAQQEANAASNASEDDDGVDDGDDDNNLHGAHDEEHITPSQQRRRNGRRQVDTDAD
HGQHGATSAHGAVAANGNHNNNGGDADDDDDMVDLLDDDTLAYFDGEASTSTAGGGWRPV
DEHGTPPLQHDPLLADLPPIVAQFYVSRGVKNLYPCQRESVQAAQHYDSHRPNLLLTLPT
SGGKTLVAEVLALKTMLLQQKDAILVLPYVAIVQEKVAALEPLAEQIGFHLETYAGHLGR
VPPLQRRDGQRTLFVATIEKAHSLLCSLIANRRLGRLGLCIVDEAHMLGYGSRGGVLETI
LTLVLHHAPRTIRIVAMTATVGNTGELATFLRARHVSSTQRPVTLREHVLFEGRVYDITG
IAQREELCEDLMTTNFVRSLDNSPLQPGPSQSPHHHHHHQQQQQQQQQHTQQHTRQGTPM
ASQPQPPPSQVNFRSASDVYTRQQQKQQQQQQQQQQQQQPGQASPATPTARYGAGGGRGG
VPSQSPLFTPPSARALPRTPHNHGDGNGYSQQHQQHHHPSQHPSQQPPSQQSQSQVRRRS
GRGNDVQDVIALMRESVPDRPCLVFNSSRRACENLARSYARTTPPTQLDAAREKVFDGIA
RAITREMATSGGSYLVQLMRRGVAYHHGGLTKDVRELVERAYKEGCIFLLIATSTLAAGV
NLPAHRVIVRTPYMGNKLLTRSQYLQMSGRAGRVGLTETGEAYLCLDKVNIKRALDIVAG
ACERCESQLASQQDLSRRLILSLVCGSSPLGMGEVEAFFNKTLLAVQNKEQVPVVIDAAL
EYLANLRLIAVRGRVIQATPLGCGINASGFPCDTVGLVCADVDEFMRAAVLKTELHLLGL
VTPFEHVQHISPQFHTMLDDFASMSPDDQAAMERLGASENVLSRAVAGRLPSAPSHNNWA
TYFKSPTGRLRRVYLTLILWTVMHRNASIYRAAAKYGVDAGLVQTLLQNAAVYAASVASF
CKELPAYWTIEHLASGMIKRLYFGVQHDIVDLMDIPGMKAQRARMLADAGFKSHKQLARA
KPGDLVSSIEFMSTKQAENLIQAAQTLVAREATDLMDEAYTLLHRESVSATPMTTPRPQR
EEHTVHGGGGGGGDGD
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgcgatgatgacgagggcatcggctcgtggtggcgctggccctgccacgaag
cgagcacatgtgatgccgggagcatcaagccacagtgtggctagcgttgctgcaagttcc
acccacacgacagacagcgaggaggcgctgcaagcggaggtggacgatatcatgctgtca
ctggcagcagacgaggcacagcaggaagcaaacgcggccagcaacgcgtccgaagatgac
gacggcgtcgacgacggggatgatgacaacaacttgcatggcgcgcacgatgaggagcac
atcacaccaagtcaacaaaggcggcgcaatggccggcgacaagtggacactgacgctgac
cacggacagcacggagcaaccagcgcacatggtgcagttgccgccaatggcaaccacaac
aacaacggtggcgatgctgatgacgacgatgacatggtggacttgttggacgacgatacg
ctggcgtattttgatggggaagcaagcacatccacagcaggcggtggctggcgccctgtc
gacgagcacggcaccccacccctgcagcacgacccgctgctggcagatttgccgcccatt
gtggcgcagttctacgtgtcgcgcggcgtgaagaacctgtacccttgccagcgggagagc
gtgcaagcagcgcagcactacgactcgcaccggccaaacctgctgctcaccctgccgacg
agcgggggcaagacgctggtggcggaggtgctggcgctgaagacgatgctgctgcagcag
aaggacgccatcctggtgctgccgtacgtggcaattgtgcaggagaaggtggcggcgctg
gagccgctggcggagcagattggctttcacctggagacgtacgcgggccaccttggccgc
gtgccgccgctgcagcgacgcgacgggcagcgcacgctgttcgtggccaccattgagaag
gcgcactcgctgctgtgctcgctcattgccaaccggcgactgggccgcctgggcctgtgc
attgtcgacgaggcgcacatgctcggatacgggtcgcgcggtggcgtactggagacgatc
ctcacgctggtgctgcaccacgccccgcgcaccatccgcattgtggccatgacagcgacg
gtgggcaacacgggcgagctggcaaccttcctgcgcgcgcgccacgtgtccagcacgcag
cggcccgtcaccttgcgcgagcacgtgctgtttgagggccgcgtgtacgacatcacgggt
attgcgcagcgcgaggagctctgtgaagacctgatgaccaccaactttgttcgctcgctc
gacaacagcccgctccaaccagggccttcacagtcccctcatcatcatcaccatcaccag
cagcagcagcagcagcagcagcagcacacgcagcagcacacgcggcaggggacaccgatg
gcttctcagccccagcctccgccatcacaggtcaactttcgctccgcctctgacgtgtac
acccggcagcagcagaaacagcagcagcagcaacaacaacaacagcagcagcagcagcca
gggcaggcctctccagcgacgccaacagcgagatacggtgccggtggtggacgtggtggc
gttccatcgcaatcaccgctcttcacaccgccatcagcaagagcactgccgcgcacgcct
cacaaccacggcgatggcaacgggtactcccagcagcaccagcagcatcatcacccatca
cagcacccgtcacagcagccaccatcgcagcaatcgcagtcacaggtgcggcggcgcagt
ggccgcgggaacgacgtgcaggatgtgattgcgctcatgcgcgagtctgtcccggaccgg
ccgtgcctcgtgttcaactcctcgcggcgggcgtgcgagaaccttgcacgcagctacgcc
cgcaccacgccgccgacgcagctggacgccgcgcgcgagaaggtgtttgacggcattgcg
cgcgccatcacgcgggagatggcgacgagcggcggctcgtatctggtgcagctgatgcgc
cgcggtgtggcctaccaccacggcgggctcaccaaggacgtgcgcgagcttgtggagcgc
gcctacaaggaggggtgcatcttcctgctgatcgccacgtccacgctggctgcgggggtg
aacctccctgcgcaccgcgtgattgtgcgcacgccgtacatgggcaacaagctgctgacg
cgcagccagtacctgcagatgtctggtcgcgccgggcgcgtggggctgacggagacgggc
gaggcgtacctgtgcctggacaaggtgaacatcaagcgggcactggatattgtggcgggg
gcgtgcgagcggtgcgagagccagcttgcctcgcagcaggacctgagccgccggctcatt
ttgtcgctggtgtgcgggtcgtcgccgctgggcatgggcgaggtggaggccttcttcaac
aagacgctgcttgctgtgcagaataaagagcaggttcccgtggtcattgacgctgcgctt
gagtacctggccaacctgcgtctgattgccgtgcgcgggcgcgtgatccaggccacgccg
ctcggctgcggcatcaacgcctctgggtttccctgcgacacggtgggcctggtgtgcgcg
gacgtggacgagtttatgcgggcggcggtgctgaagacggagctgcacctgcttggcctg
gtcacgccctttgagcacgtgcagcacatctcgccgcagttccacaccatgctggacgac
tttgccagcatgtcccccgacgaccaggctgccatggagcgccttggcgcctcggaaaat
gtgctgtcgcgggcggtggcggggcggctgccctctgcgccgtcgcacaacaactgggca
acgtacttcaagtcgcccacgggccggctgcggcgggtgtacctgacgctcatcctgtgg
acggtgatgcaccgcaacgcgtccatctaccgcgccgctgcgaaatatggtgttgatgcc
ggcctcgtgcagacgctgctgcagaacgcagccgtgtacgcagcgagcgtcgcctccttc
tgcaaggagctcccggcgtattggaccattgagcatttggcgagcgggatgatcaagcgc
ctctactttggcgtccaacacgacatcgttgatctcatggacattcctggcatgaaggcg
caacgtgcccgcatgctcgcagacgcaggcttcaagagccacaagcagcttgcgcgcgcc
aagcctggcgacctggtgtccagcatcgaattcatgtcgacgaagcaggccgagaatctg
attcaggccgcgcagacgctcgttgcgcgcgaagcaacagacctcatggacgaagcgtac
acgctgctgcaccgggagtccgtgtccgcaacaccgatgacgacaccgcggccgcagcgc
gaggagcacactgtccatggcggtggcggtggcggtggtgatggtgattag
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