Salpingoeca rosetta: PTSG_06156 Help Entry PTSG_06156        CDS       T04136                                  Name (RefSeq) Ercc8 protein   KO K10570   DNA excision repair protein ERCC-8 Organism sre  Salpingoeca rosetta Pathway sre03420   Nucleotide excision repair sre04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:sre00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     PTSG_06156   09124 Replication and repair    03420 Nucleotide excision repair     PTSG_06156  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:sre04121]     PTSG_06156    03400 DNA repair and recombination proteins [BR:sre03400]     PTSG_06156 Ubiquitin system [BR:sre04121]  Ubiquitin ligases (E3)   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      PTSG_06156 DNA repair and recombination proteins [BR:sre03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      Cul4-CSA complex       PTSG_06156 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR35_TULP_N EIF3I WD40_RFWD3 Beta-prop_WDR90_POC16_2nd WD_LRWD1 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_WDR19_1st NBCH_WD40 Kdo Beta-prop_RIG_1st Hira Motif Other DBs NCBI-GeneID:  16073622 NCBI-ProteinID:  XP_004993048 UniProt:  F2UC40 LinkDB All DBs Position Unknown AA seq 517 aa AA seqDB search MDVLHRHALMRGLLPCEPWKRRLAQLAETQVELQNAHILVHRPENKKIAFLDIDRAENRY LLSAGTSKHIRIHDLEPVRRQSLGMDVPTPCDDYGDGASQSSTRSRRGRDQAEPRPMISY GGANLAQRLREEDRATRRRNRALACRVPEVAFISAGREGAHTGGIGTVQWYPQDSGMFTS SARDGNLKCWDTNELAVIEEFTGFQTLRHHAQSPVASGHELIALATGPAVVLCDLRTGMR THSLSIHQKASTCVCWSPTSEHLLVSGTIDGQVLVWDVRRAKPCLSVLDARNNVQATARM RRAHHGAVAFAAFTPDGEHIITCGESRRKWDMRTFRNTLVHFTKDHSTSARSCAITNAHG RTLMYSAATDHTGLLVHDLETGQATTTLLGHFAAVSAVTATRTHGQPPIIVSASAIGSLA LWKAPRVITHPTPDMTRHLAASMRDMDRRFPLPVRLSLEAPALHRLQRGVRPAGDIICET GTRHHSTVSSGHNDGSCNSGNAARPTSVGSEHICTSG NT seq 1554 nt NT seq  +upstreamnt  +downstreamnt atggatgtgctgcaccgacatgcgctgatgcggggcctgctgccttgcgaaccgtggaag cggcggctggcacagctggcggagacgcaggtggagctgcagaacgcacacatcctcgtg caccgaccggagaacaagaagattgccttcctggatattgaccgcgcagaaaacaggtac ttgctctctgctggcacctccaaacacatccgcatccacgacctggagcccgtgcggcgc caaagcttgggtatggacgtgcccaccccgtgcgatgactacggcgacggcgcttctcaa agctcaacgcgcagccgtcgcggtcgagaccaagcagagccccgacctatgatcagctac ggcggtgccaacctggcgcagcggctgcgggaggaggaccgtgcaacccgccggcgcaac cgagccctcgcatgccgcgtgcccgaggtggccttcatctccgccgggagggagggcgcg cacacgggcggcatcggaaccgtgcagtggtatccccaggacagcggcatgttcacctca agcgcacgggacggaaacctcaagtgctgggacacaaacgagcttgccgtcattgaggag ttcacgggcttccagaccctgcgtcaccacgcgcagtcgcccgttgccagcggccacgag ctcatcgccctcgccacgggccccgccgtcgtgctgtgcgacctacgcacgggcatgcgc acgcactcgctctccatccaccagaaggcgtccacgtgcgtgtgctggtcgcccaccagc gaacacctccttgtgtccggcaccatcgacgggcaggtgctggtgtgggacgtgcgacga gcaaagccgtgcctcagcgtgctggatgcacgtaacaacgtgcaggcaacagcgcgcatg cggcgtgcacaccacggcgctgttgcatttgccgccttcacgccagacggcgagcacata atcacgtgtggggagtcgcgacgcaagtgggacatgcgcacattcaggaacacgctcgtg cacttcaccaaggaccacagcacctctgcacggtcctgcgccatcaccaacgcccacggc cgcacgctcatgtactctgccgccacagaccacacgggcctgcttgtgcacgaccttgag acgggccaggccacgaccacgctcctgggccactttgcagccgtcagcgcagtcacagcc acgcgcacgcacgggcaacccccaatcatcgtgtcggcatctgcgattggcagtctggcg ctgtggaaggcgccgcgggtcatcacgcacccaacaccagatatgacgcgccatctcgct gcgtcgatgcgggacatggacaggcggtttccgctgcctgtgcgcttgtcgttggaggcg cctgcactgcaccgattacagcggggagttcggcccgcaggggacattatctgcgaaact ggcacgcgtcaccacagcaccgtcagcagcggccacaacgacggcagctgcaacagcggc aacgcagcccgccccacgagtgtcgggagcgagcacatctgcacctccggctga

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