Salpingoeca rosetta: PTSG_06357
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Entry
PTSG_06357 CDS
T04136
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sre
Salpingoeca rosetta
Pathway
sre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTSG_06357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_06357
Spliceosome [BR:
sre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PTSG_06357
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
Prp31_C
Tweety
RRN3
Motif
Other DBs
NCBI-GeneID:
16073822
NCBI-ProteinID:
XP_004993247
UniProt:
F2UCP0
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MSLHDALLADLEDLDDDEEEIVEENTEVAPKEEEDMDDDEDLDDIAEAGEEEQDDLYMSS
VHAIAKLADSEKMQRVMTQIEEYGKKKDQSMTSLDVASSSPEYELVVEANNLTAEIDNEI
GVVHKYIRDKYAKRFPELEQLVREPLDYVKTVQLLQNNLDVTQAGVDEILAPATVMIVSV
SATTTQGVELSADELRQVNEGCEMLLRLDDYKARIYSYVESKMFFLAPNLTHICGSSTAA
RLLGVAGGLEKLSKMPACNILVLGAQKKSLSGFSAAATLPHTGFIYYSELVQSQPPDFRR
KCARLVAAKVALAARVDSYRSTAAQGATIGIKLREDIEKKMEKAMEPPPGKTVKALPRPD
DPYKKRRGGKRFRRQKERQATTEAMKAANRMTFGEIEEDVVQEEMAAFSGPRVAKGRLRA
VEATQKGGALSKKMQRRLQREASHGGMSTIRGTATAGTASVSFTPMQGLEIVSKHLEQKK
AESNKYFGNEGFVNVAKKAKKSS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgcacgacgcgttgctcgctgacctggaggacctcgacgatgacgaggaggag
attgttgaggagaacactgaggtcgcccccaaggaggaggaagacatggatgatgacgag
gacctggatgacattgctgaggccggagaggaagagcaggatgacttgtacatgtcctct
gttcatgccattgccaagcttgcagacagtgaaaagatgcaacgcgtcatgacccagatt
gaggaatacggcaagaagaaggaccaaagtatgacttcgcttgacgttgcctcctccagc
ccggaatacgagcttgttgttgaggccaataacctcaccgccgagattgacaacgaaatc
ggggtggtgcacaagtacatccgtgacaagtacgccaagcgcttcccagagctggagcag
ctcgtcagagaaccccttgactacgtcaaaaccgtccagctgctgcaaaacaaccttgat
gtgacgcaagccggtgtggacgagatcctggcgccagcaacagtcatgatcgtcagcgtg
tcagcaaccacaacacagggtgttgagctgagtgctgacgagctgcggcaggtgaacgaa
gggtgcgagatgctgcttcgcctggacgactacaaagcgcgcatctacagctacgtcgag
tcgaagatgttcttcctcgcgccaaacctcacacacatctgcggctcgtcgactgccgcc
cgtctcctcggtgttgccgggggacttgaaaagctctccaaaatgcccgcatgcaacatt
ttggtgcttggcgcgcagaagaagtccctgtccgggttttctgccgcggcgacgctgccg
cacacgggcttcatctactactctgagctcgtgcagagccagccgccggactttcgccgc
aagtgcgcgcgtctcgtggcggcgaaggttgcgctggcggcgcgcgtggactcgtaccgg
tcgacagcagcacagggcgccaccatcggcatcaagctgcgtgaggacattgagaagaag
atggagaaggcgatggagccgccaccagggaagactgtcaaggcactgccccgccccgac
gacccctacaagaagcgacgcggtggaaagaggttccggcggcagaaggagcgacaggcg
acgacggaggcaatgaaggctgccaacaggatgacctttggcgaaattgaggaggatgtt
gtccaggaggagatggctgcgttctccggcccgcgcgtcgcaaagggcaggctgcgtgcc
gtggaggcgacccagaagggcggggcgctgtcgaagaagatgcagaggcggctgcaacgc
gaggcatcacacggtggcatgtccacaatccgcgggacagcaacagccggcacagcatct
gtctcgttcacgccgatgcagggcctggagattgtgagcaagcacctggagcagaagaag
gcagagagcaacaagtactttggcaacgagggctttgtcaacgtcgccaaaaaggcaaag
aagagctcgtag
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