KEGG   Salpingoeca rosetta: PTSG_06468
Entry
PTSG_06468        CDS       T04136                                 
Name
(RefSeq) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
sre  Salpingoeca rosetta
Pathway
sre03030  DNA replication
sre03410  Base excision repair
sre03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PTSG_06468
   03410 Base excision repair
    PTSG_06468
   03450 Non-homologous end-joining
    PTSG_06468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sre03032]
    PTSG_06468
   03400 DNA repair and recombination proteins [BR:sre03400]
    PTSG_06468
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sre04147]
    PTSG_06468
DNA replication proteins [BR:sre03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PTSG_06468
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PTSG_06468
DNA repair and recombination proteins [BR:sre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PTSG_06468
Exosome [BR:sre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PTSG_06468
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc LarA_C XPG_I_2
Other DBs
NCBI-GeneID: 16072408
NCBI-ProteinID: XP_004991848
UniProt: F2UFW3
LinkDB
Position
Unknown
AA seq 380 aa
MGIHDLSKVIGDNASHAVKETEMKNLFGRKVAIDASMSIYQFLIAVRSEGSNLTNAEGET
TSHLSGIFYRTIRMVNNGVKPVYVFDGKPPTLKSGELAKRTERRKEAQSKLEAATEEGVQ
ADMEKFTRRLVKVTPEHNRQCQELLDLMGIPYIVAPCEAEAQCAELVKAGKVFATATEDM
DALTFGTSVLLRHMTFSEARKMPIQQFELKKVLEGLDLSQDEFIDLCILLGCDYCDKIGG
IGRVRAYSLIKEHHSIEAILEAIKKEKKKYTVPDDWKFAEARELFKNPEVAPAKDIDLKW
NIPDVDKLVDFMCNKHGFEEGRIRRGAEKLVKARSTSTQGRLDSFFKVLPGGAPKKRKSS
ENKAGAKKGKGGKVKGKGRK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcatgacctgtccaaggtgattggcgacaacgccagtcatgctgtgaaggag
acggagatgaagaacctctttggccgcaaggtggccattgatgcgtccatgagcatctac
cagttcctgattgcggtgcgatcggaaggcagcaacctcaccaacgcagagggcgagacc
accagccacctctccggcatcttctaccgcaccatccgcatggtcaacaacggtgtcaag
cccgtgtatgtgtttgatggcaagccaccgacgctgaagagtggcgagcttgcgaagcgg
acggagcgcaggaaggaggcccagtccaagctggaggccgccacggaggaaggcgtgcag
gcggatatggagaagtttacgcgtcgactggtgaaggtcacacccgagcacaaccggcag
tgccaagagctcctggacctcatgggcatcccatacatcgtggcgccgtgtgaggcagag
gcgcagtgtgccgagctggtcaaggcgggaaaagtgtttgcgacggccacagaggatatg
gatgcgttgacgtttggcacgagtgtgctgctgcgtcacatgacgttcagcgaagcgcgc
aagatgccgattcagcagtttgagctgaagaaggtgctggagggcctcgacctctcccag
gacgagtttatcgacctgtgcatcctgcttggctgcgactactgcgacaagattggagga
attggacgcgtgcgcgcgtactcactcatcaaggagcaccattccatcgaggcgatactg
gaggcgatcaagaaggagaagaagaagtacacagtgccggacgactggaagtttgcagag
gcacgcgagctgttcaagaacccagaagtcgcgccggcaaaggacatcgacctcaagtgg
aacatcccggatgttgacaaactcgttgatttcatgtgcaacaaacacggcttcgaggag
ggccgcattcgccgcggtgcagagaagctcgtcaaggcgcgatcgacgtcaacgcagggt
cgtcttgactcgttcttcaaagtactcccgggcggggctccaaagaagcgcaagagctcg
gagaacaaggctggggcgaagaagggcaaaggaggaaaagtgaagggaaagggaaggaag
tga

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