Salpingoeca rosetta: PTSG_06744
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Entry
PTSG_06744 CDS
T04136
Name
(RefSeq) Rad54b protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
sre
Salpingoeca rosetta
Pathway
sre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PTSG_06744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sre03400
]
PTSG_06744
DNA repair and recombination proteins [BR:
sre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
PTSG_06744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_34
DEAD_2
SLFN-g3_helicase
Nop14
Motif
Other DBs
NCBI-GeneID:
16072700
NCBI-ProteinID:
XP_004992141
UniProt:
F2UEN8
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MRRSAAPSQRFKAPGKAKGAMMRAAFLPPRTAHGTGTAKPVTAAASTRAATTSSSAPAST
ATTPAKESKATASTASATPGAGSVGTSTTPAARGAGLPKKSPLGAVNGQARKRAKFSMPT
QNMDVVRKKQEQDSKDMPWRYFSVVWCKFSRKKHKTWEGDAILLVRHTTAILKDTEGKDV
SKSTTMKAKDLASLKEGETLYFGGKEIEIMGTISEEAYATGKCFLGGGGGATSNTPKPPA
RRALPKPKAFKRVTAGGGAAGNGSASGGGRTSPTKKPITPRFDPNAPGALVINHPAGAKH
QVVPVVVDPHLGVHLRPHQRVGVEFLWHSVVGKPHVEGQGCILGDEMGLGKTLQCITLIW
TALKQNHDGKPLARRVMVVCPGSLVRNWEQEFRKWLGRERIKVFVVKADKPVREFAAASV
FSVLLLSYEMLLRNIADVSKLNLDIVVCDEAHRLKNTSAKTTMAMMGLRARRRIALTGTP
IQNDLQEFFAIVDFCNPGILGTQATFRRVYERPILESRQPTATPAERKLGDARATELTRM
ISSFCLRRTKEINLSYLPPKSDYVLFCRPSQTQLQLYRALLRSTAVKSCLQGRLSAGSHL
VIITALKTLCNSPTILCRKGQPDAGSGRSRTPRPKKKATATTKSSSSSSSSGSGGGGGGG
GDGNDDDDDDDNEDDFVRDLMVEELGRPALSTLDDVEDVSLCGKMQLLSHMLQHWRAHPA
NERVLIVSNSTKVLSRVQALCEQCAYPFLRLQGNTPTHKRLELVNRFNSRVRDDFVFLMS
SKAGGVGLNIVGASRLILYDTDWNPANDLQAMARVWRDGQKRHVYVYRFLTTGTIEEKIY
QRQVHKQGLSGSVVDKQGSKKTAGTKQVAGFSMEELKDIFSLREDTKSDTNDLLKKFAGE
DGSGSGRQKSASLSLDTLLTWNRQLAPFDHARFDDEALRAVDDAAGGLLTCAFHTSSKDG
GAGDVDKEVASAVLTEAASGDDNDEEDADEGDEEAEEEQGEGEEEEEEEEEEEEEGEEVS
KEASKAGSSINTRSTSSSSGSSVQQGWSNNLDTRELVLEDDDDDDDAFVP
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgatcggcggcaccgagccagcgcttcaaggcgccaggcaaggccaaaggcgcc
atgatgcgcgcagccttcctgcctccacgcaccgcgcacggcaccggcaccgcgaaacca
gtcactgcggctgcttcaactcgtgctgcaaccacttcgtcttccgcgccagcatctaca
gcaacaacgcctgcaaaggagtccaaggccaccgcaagcaccgcaagcgccacgcctggt
gctggttctgtgggcacgtcgacgacgcctgctgcacgtggggctggtctgccgaagaag
agcccgctgggcgctgtgaatgggcaggcacgaaagcgcgccaagttttccatgcccacg
cagaacatggatgttgtgcgcaagaagcaggagcaagattccaaggacatgccctggcgc
tacttttccgtcgtctggtgcaagttcagccgcaagaagcacaagacctgggagggcgac
gccatcttgctggtgcgacacacgacggccatcttgaaggacacggagggcaaggacgtg
tccaagagcacgacgatgaaggccaaggacctggccagcttgaaggaaggcgaaacgctg
tactttggcggcaaggagattgagattatgggcaccatcagcgaggaggcatacgcaacg
ggcaagtgcttccttggcggcggaggtggggccaccagcaacacgcccaagcccccagcc
aggcgcgccctgccaaaaccaaaggccttcaagcgcgtcactgccggcggtggggccgct
gggaacggcagtgcctctggcggtggccgcacgtcgcccacgaagaagcccatcaccccg
cgcttcgaccccaacgcgccaggcgccctggtcatcaaccaccccgccggcgccaagcac
caggtggtccccgttgtggttgacccgcacctcggcgtgcacctccgcccgcaccagcgc
gtgggcgtggagtttctctggcactctgttgtcggcaagccccacgtggagggccagggc
tgcatcctgggcgacgagatgggtcttggcaagacgctgcagtgcatcacgctcatctgg
actgcgctcaagcagaaccacgacggcaagcccctggcccgccgcgtcatggtcgtgtgc
ccgggcagcctggtgcgcaactgggaacaggagtttcgcaagtggctcgggcgcgagcgc
atcaaggtgtttgtggtcaaggccgacaagcccgtgcgcgagtttgccgcggccagcgtg
ttctccgtgctgctgctgtcctacgagatgctgctgcgcaacattgccgacgtcagcaag
ctcaacctcgacattgttgtgtgcgacgaggcgcaccggctcaagaacacgagcgccaag
accaccatggccatgatgggcctgcgcgcccgccgccgcattgccctcaccggcacaccc
atccagaacgacctgcaggagtttttcgccattgtcgacttttgtaacccaggcatcctc
ggcacgcaagcgacgttccgccgggtgtatgagcggcccatcctggagtctcggcagccc
acggcgacgccggcagagcgcaaactcggcgacgcgcgcgccacggagctgacgcgcatg
atctcctcgttctgcctgcgccgcaccaaggaaatcaacctcagctacctcccgcccaag
tcggactacgtgctgttctgccgcccgtcgcagacgcagctgcagctgtaccgcgccctg
ctgcgctccacagccgtcaagtcgtgcttgcaaggccgcctctctgccggcagccacctc
gtcatcatcaccgccctcaagaccctgtgcaactccccaaccatcctctgccgcaaaggc
cagcccgacgcgggcagcggtcgctcccgcacacccaggccaaagaagaaggcgacagcg
acgacgaagagcagcagcagcagcagcagcagcggcagtggtggtggtggtggtggtggt
ggtgatggcaatgatgacgacgacgatgatgataacgaggacgatttcgtgcgggatttg
atggtggaggagcttgggcggcctgcgctgtccacgctggacgacgtggaggacgtgtcg
ctgtgcggaaagatgcagctgctctcgcacatgttgcagcactggcgtgcgcacccggcc
aacgagcgcgtgctcatcgtctccaactccaccaaggtgcttagccgcgtgcaggccctg
tgcgagcagtgcgcttacccgtttctgcgcctgcagggcaacacgcccacgcacaagcgc
cttgagcttgtgaaccgcttcaacagccgcgtgcgcgacgactttgtgtttctcatgagc
agcaaggccggtggcgtcggcctcaacattgtcggcgcctcccgcctcatcctctacgac
acggactggaacccagccaacgatctgcaagccatggcacgcgtgtggcgcgatgggcag
aagcgacacgtgtacgtgtaccgcttcctgaccacaggcacgattgaggagaagatttac
cagcggcaggtgcacaagcaaggcctgagcggctctgtcgtggacaagcagggcagcaag
aagacggcgggcacgaagcaggttgctggtttctccatggaggagctcaaggacatcttc
tccctgcgtgaggacaccaagtcggacaccaacgacctgctcaagaagtttgctggcgag
gatggcagtggcagcgggcgccagaagtctgcctcgctctccctcgacacgctgctgacg
tggaatcggcagctggcgccgtttgaccacgcgcgctttgacgacgaggcgctcagggcc
gtggacgacgcagcagggggcttgctcacgtgcgcgttccacacgagctccaaagacggc
ggcgctggcgacgtggacaaggaggtggcttcggccgtgctcaccgaagctgccagcggt
gacgacaatgatgaggaagacgcagacgaaggagacgaggaagcagaggaggagcaaggg
gaaggagaagaggaggaggaggaggaggaggaggaggaggaggaaggtgaagaggtgagc
aaggaggcaagcaaagccggcagcagcatcaacacgaggagcacgagcagcagcagtggc
agcagtgtgcagcaaggatggtccaacaacctcgacacccgcgagcttgtgctggaagac
gatgatgatgacgatgacgcgtttgtgccctga
DBGET
integrated database retrieval system
