Salpingoeca rosetta: PTSG_06970
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Entry
PTSG_06970 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
sre
Salpingoeca rosetta
Pathway
sre03018
RNA degradation
sre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PTSG_06970
09123 Folding, sorting and degradation
03018 RNA degradation
PTSG_06970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_06970
03041 Spliceosome [BR:
sre03041
]
PTSG_06970
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PTSG_06970
mRNA degradation factors
5'-3' decay
Lsm complex
PTSG_06970
Spliceosome [BR:
sre03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PTSG_06970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
16072935
NCBI-ProteinID:
XP_004992373
UniProt:
F2UFC0
LinkDB
All DBs
Position
Unknown
AA seq
107 aa
AA seq
DB search
MSDQKQQKRERKHILDLEKYVDKKLRVKFSGGREVVGVLQGYDPLSNLVLSDTIEFLRDP
SDLSKITDKTRTLGLCVCRHVSIVMIAPEEGMTETENPFAVPDTDES
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccagaagcagcagaagcgcgagcgcaaacacatcctcgacttggagaagtac
gtggacaagaagcttcgcgtcaagttcagtggcggccgcgaagttgtcggtgtgttgcag
ggatatgatccgttgtcaaacctcgtgctgagcgacaccatcgagttccttcgcgatccc
agcgacctgagcaagatcacagacaagacgcggacactcgggctgtgtgtgtgcagacac
gtgagcatcgtcatgattgcgccagaggaaggcatgacagagacagagaacccgtttgct
gtcccggacacagacgagtcgtag
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integrated database retrieval system